prot_P-wetherbeei_contig15021.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig15021.1.1
Unique Name	prot_P-wetherbeei_contig15021.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	173

Homology

[Close]

BLAST of mRNA_P-wetherbeei_contig15021.1.1 vs. uniprot
Match: D7FZY4_ECTSI (DNA repair enzyme n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY4_ECTSI)

HSP 1 Score: 223 bits (567), Expect = 3.840e-64
Identity = 108/175 (61.71%), Postives = 133/175 (76.00%), Query Frame = 0

Query:    3 FGVPYIVAPMEAEAQCAELERLGLVDGVVTDDSDVWVFGGRVVYKNIFDDKKYVEAYYLTDAEREIGLGTDEMRALALLLGSDYTEGVRGVGIVNAMEILRAFSCEGHGPAHSLERFREWLDGFD----FEVEKPKRRRRGEPLPVLSEVHQFHVRHCAARHRWVAPPGFPAAEV 173
            FGVPY+VAPMEAEAQC  LE+L LVDG VTDDSD + FGGR VYKNIF D+K+VEAY L DAE+++G+GTDE+ ALALLLGSDYTEGVRGVGIVNAME++ AF  EG G  H L +F++W+DGFD     E+E   +R   + +  LS   +FH++H  AR+RW  P GFP+ EV
Sbjct: 1315 FGVPYVVAPMEAEAQCCVLEQLRLVDGTVTDDSDAFAFGGRAVYKNIFSDRKFVEAYLLPDAEKDLGVGTDEVVALALLLGSDYTEGVRGVGIVNAMEVINAFPLEGKGAHHGLSKFKKWIDGFDPLLDQELEGLTKRGSQKEIDGLSLEMKFHLKHRTARNRWTVPDGFPSEEV 1489

[Close]

BLAST of mRNA_P-wetherbeei_contig15021.1.1 vs. uniprot
Match: A0A6H5KXJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXJ8_9PHAE)

HSP 1 Score: 221 bits (563), Expect = 1.320e-63
Identity = 107/175 (61.14%), Postives = 133/175 (76.00%), Query Frame = 0

Query:    3 FGVPYIVAPMEAEAQCAELERLGLVDGVVTDDSDVWVFGGRVVYKNIFDDKKYVEAYYLTDAEREIGLGTDEMRALALLLGSDYTEGVRGVGIVNAMEILRAFSCEGHGPAHSLERFREWLDGFD----FEVEKPKRRRRGEPLPVLSEVHQFHVRHCAARHRWVAPPGFPAAEV 173
            FGVPY+VAPMEAEAQC  LE+L LVDG VTDDSD + FGGR VYKNIF ++K+VEAY L DAE+++G+GTDE+ ALALLLGSDYTEGVRGVGIVNAME++ AF  EG G  H L +F++W+DGFD     E+E   +R   + +  LS   +FH++H  AR+RW  P GFP+ EV
Sbjct: 1304 FGVPYVVAPMEAEAQCCMLEQLRLVDGTVTDDSDAFAFGGRAVYKNIFSERKFVEAYLLPDAEKDLGVGTDEVIALALLLGSDYTEGVRGVGIVNAMEVINAFPLEGKGAHHGLSKFKKWIDGFDPLLDQELEGLTKRGSQKEIDGLSLEMKFHLKHRTARNRWTVPEGFPSEEV 1478

[Close]

BLAST of mRNA_P-wetherbeei_contig15021.1.1 vs. uniprot
Match: A0A836CHS7_9STRA (XPGI domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHS7_9STRA)

HSP 1 Score: 204 bits (518), Expect = 4.130e-59
Identity = 105/182 (57.69%), Postives = 131/182 (71.98%), Query Frame = 0

Query:    3 FGVPYIVAPMEAEAQCAELERLGLVDGVVTDDSDVWVFGGRVVYKNIFDDKKYVEAYYLTDAEREIGLGTDEMRALALLLGSDYTEGVRGVGIVNAMEILRAFSCEGH--GPAHSLERFREWLDGFD----FEVEKPKRR--RRG---EPLPVLSEVHQFHVRHCAARHRWVAPPGFPAAEV 173
             GVPY+VAPMEAEAQC ELERLGLVDG+VTDDSD +VFG + VYKNIF+D+KYVEAY L D   E G+ T  +RALALL+GSDYT G++ VG+VNAMEI+RAF        PA +L RF+EWLDGFD     ++EK   R  R G   E    ++   +FH++H +AR+RW+A P FP+ EV
Sbjct:  192 LGVPYLVAPMEAEAQCVELERLGLVDGIVTDDSDAFVFGAKAVYKNIFEDQKYVEAYLLPDITAEFGISTPHLRALALLMGSDYTLGIKNVGLVNAMEIVRAFPLRAGEASPAPALRRFKEWLDGFDPLGDAQLEKRVARAIREGPEAEEREGVTLAQRFHLKHRSARNRWIASPSFPSEEV 373

[Close]

BLAST of mRNA_P-wetherbeei_contig15021.1.1 vs. uniprot
Match: A0A1E7FI38_9STRA (XPG_I-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FI38_9STRA)

HSP 1 Score: 191 bits (484), Expect = 1.170e-57
Identity = 98/178 (55.06%), Postives = 121/178 (67.98%), Query Frame = 0

Query:    3 FGVPYIVAPMEAEAQCAELERLGLVDGVVTDDSDVWVFGGRVVYKNIFDDKKYVEAYYLTDAEREIGLGTDEMRALALLLGSDYTEGVRGVGIVNAMEILRAFSCEGHGPAHSLERFREWLDGFD-FEVEKPKRRRRGEPLPVL------SEVHQFHVRHCAARHRWVAPPGFPAAEV 173
            FG+PY+VAP EAEAQC ELE+LGLVDG+V++DSD +VFGG+ VYKNIFDDKKYVE Y   DAE E+ L  D M ALA+LLG DYTEGV+GVGIVN ME+L+AF   G      L+RFR WLDGFD  ++ K  + +              ++   FH +H  AR RW+A   FP A+V
Sbjct:   12 FGIPYVVAPAEAEAQCVELEKLGLVDGIVSEDSDTFVFGGQKVYKNIFDDKKYVEVYNAKDAEEEMNLSHDSMVALAMLLGGDYTEGVKGVGIVNGMEVLQAFDV-GQDCKAGLQRFRHWLDGFDPNDLSKHSKNKXXXXXXXXXXXXXXNKEQIFHKKHHTARTRWIASKNFPDAKV 188

[Close]

BLAST of mRNA_P-wetherbeei_contig15021.1.1 vs. uniprot
Match: B8C7S2_THAPS (DNA repair enzyme (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C7S2_THAPS)

HSP 1 Score: 190 bits (483), Expect = 3.370e-57
Identity = 97/174 (55.75%), Postives = 122/174 (70.11%), Query Frame = 0

Query:    4 GVPYIVAPMEAEAQCAELERLGLVDGVVTDDSDVWVFGGRVVYKNIFDDKKYVEAYYLTDAEREIGLGTDEMRALALLLGSDYTEGVRGVGIVNAMEILRAFSCEGHGPAHSLERFREWLDGFDFEVEKPKRRRRGEPLP----VLSEVHQFHVRHCAARHRWVAPPGFPAAEV 173
            G+P++ +P EAEAQCA LE LGLVDGVVT+DSD++VFGGR VYKN F++++YVEAYY  DAE+E+ LG  +M ALA+LLG DYT+GV+GVGIVN MEIL+AF   G     SL++FREWLDG             G+P       LS    FH +H +ARHRWVAP  FP+  +
Sbjct:   29 GIPWVESPSEAEAQCAALEELGLVDGVVTEDSDIFVFGGRKVYKNFFNEQQYVEAYYAKDAEKELALGKHQMIALAMLLGGDYTDGVKGVGIVNGMEILQAFPI-GEDIHASLQKFREWLDGM------------GDPPSNADGTLSNEMIFHKKHKSARHRWVAPSDFPSRAI 189

[Close]

BLAST of mRNA_P-wetherbeei_contig15021.1.1 vs. uniprot
Match: A0A7S0UIJ3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UIJ3_9STRA)

HSP 1 Score: 199 bits (505), Expect = 4.800e-57
Identity = 104/176 (59.09%), Postives = 124/176 (70.45%), Query Frame = 0

Query:    3 FGVPYIVAPMEAEAQCAELERLGLVDGVVTDDSDVWVFGGRVVYKNIFDDKKYVEAYYLTDAEREIGLGTDEMRALALLLGSDYTEGVRGVGIVNAMEILRAFS----CEGHGPAHSLERFREWLDGFD-FEVEKPKRRRRGEPLPVLSEVHQFHVRHCAARHRWVAPPGFPAAEV 173
            FG+PY+VAP EAEAQC ELERLGLVDG+VT+DSD +VFGG+VVYKNIFDDKKYVE Y+  DA  E+ L  D + ALA+LLG DYTEGV+GVGIVN ME+L+AF     CE       L+RFR+WLDGFD F+  K           V  +V  FH +H  AR RW+AP  FP A+V
Sbjct:  270 FGIPYVVAPAEAEAQCVELERLGLVDGIVTEDSDTFVFGGQVVYKNIFDDKKYVEVYHTKDASEEMNLTQDSLIALAMLLGGDYTEGVKGVGIVNGMEVLQAFDVAQDCE-----EGLKRFRKWLDGFDPFDQSKKGATPEIANRSVQEQV--FHRKHHTARTRWIAPKHFPDAKV 438

[Close]

BLAST of mRNA_P-wetherbeei_contig15021.1.1 vs. uniprot
Match: A0A7S4MZJ3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MZJ3_9STRA)

HSP 1 Score: 197 bits (500), Expect = 2.500e-55
Identity = 104/177 (58.76%), Postives = 123/177 (69.49%), Query Frame = 0

Query:    3 FGVPYIVAPMEAEAQCAELERLGLVDGVVTDDSDVWVFGGRVVYKNIFDDKKYVEAYYLTDAEREIGLGTDEMRALALLLGSDYTEGVRGVGIVNAMEILRAFSCEGHGPAHS---LERFREWLDGFDFEVE---KPKRRRRGEPLPVLSEVHQFHVRHCAARHRWVAPPGFPAAEV 173
            FGVPY+ +P EAEAQCA LE LGLVDGVVT+DSD++VFGGR VYKNIFDD+KYVE Y   DAEREIGL  + M ALA+L+G DYTEGV+GVGIVN MEIL AF         +   LE FR+WL+GFD  +E     K +R G       E+  FH++H +AR RW  P  FPAA V
Sbjct:  644 FGVPYVESPAEAEAQCAMLEELGLVDGVVTEDSDIFVFGGRNVYKNIFDDQKYVEVYLSRDAEREIGLTRERMIALAMLMGGDYTEGVKGVGIVNGMEILEAFFTSAGALDDAEVGLEAFRKWLEGFDPSIELNGTDKTKRGGTEDMTSEEI--FHLKHRSARTRWTVPKDFPAANV 818

[Close]

BLAST of mRNA_P-wetherbeei_contig15021.1.1 vs. uniprot
Match: K0SHA9_THAOC (XPGI domain-containing protein (Fragment) n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SHA9_THAOC)

HSP 1 Score: 184 bits (467), Expect = 2.870e-55
Identity = 93/170 (54.71%), Postives = 118/170 (69.41%), Query Frame = 0

Query:    4 GVPYIVAPMEAEAQCAELERLGLVDGVVTDDSDVWVFGGRVVYKNIFDDKKYVEAYYLTDAEREIGLGTDEMRALALLLGSDYTEGVRGVGIVNAMEILRAF--SCEGHGPAHS-LERFREWLDGFDFEVEKPKRRRRGEPLPVLSEVHQFHVRHCAARHRWVAPPGFPA 170
            G+P++ +P EAEAQCA LERLGLVDGVVT+DSD++VFGG+ VYKN FD++K+VEAYY  D ERE+GL  D + ALA+LLG DYT+GVRGVGIVN ME+LRAF  + +G    H  L RFR+W+DG +  +          P         FH +H +AR RW AP  FP+
Sbjct:    3 GIPWVESPSEAEAQCAALERLGLVDGVVTEDSDIFVFGGQKVYKNFFDEQKFVEAYYARDIERELGLDKDRLVALAMLLGGDYTDGVRGVGIVNGMEVLRAFPPAADGVEGVHGGLSRFRDWMDGINDVL----------PDDATPPEVAFHGKHRSARTRWAAPADFPS 162

[Close]

BLAST of mRNA_P-wetherbeei_contig15021.1.1 vs. uniprot
Match: A0A448ZIR6_9STRA (Ig-like domain-containing protein (Fragment) n=2 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZIR6_9STRA)

HSP 1 Score: 191 bits (486), Expect = 3.010e-53
Identity = 98/172 (56.98%), Postives = 118/172 (68.60%), Query Frame = 0

Query:    3 FGVPYIVAPMEAEAQCAELERLGLVDGVVTDDSDVWVFGGRVVYKNIFDDKKYVEAYYLTDAEREIGLGTDEMRALALLLGSDYTEGVRGVGIVNAMEILRAFSCEGHGPAHSLERFREWLDGFDFEVEKPKRRRRGEPLPVLSEVHQ-FHVRHCAARHRWVAPPGFPAAEV 173
            FGVPY+VAP EAEAQC ELE+LGLVDG+VT+DSD +VFGG VVYKNIF+DKK+VE Y+  DA  E+ L  D + ALA+LLG DYTEGV+GVGIVN MEIL+AF       A  L RFR+WLDGFD                  +E  + FH +H  AR+RW+AP  FP  +V
Sbjct: 1482 FGVPYVVAPAEAEAQCVELEKLGLVDGIVTEDSDTFVFGGEVVYKNIFEDKKFVEVYHAKDASEEMNLNQDALVALAMLLGGDYTEGVKGVGIVNGMEILQAFDVAQDCKA-GLTRFRKWLDGFDPLYSAKNNNSATNITGASTEKEKSFHKKHHTARNRWIAPKHFPDPKV 1652

[Close]

BLAST of mRNA_P-wetherbeei_contig15021.1.1 vs. uniprot
Match: A0A7S2WUF9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUF9_9STRA)

HSP 1 Score: 190 bits (483), Expect = 5.450e-53
Identity = 95/171 (55.56%), Postives = 113/171 (66.08%), Query Frame = 0

Query:    3 FGVPYIVAPMEAEAQCAELERLGLVDGVVTDDSDVWVFGGRVVYKNIFDDKKYVEAYYLTDAEREIGLGTDEMRALALLLGSDYTEGVRGVGIVNAMEILRAFSCEGHGPAHSLERFREWLDGFDFEVEKPKRRRRGEPLPVLSEVHQFHVRHCAARHRWVAPPGFPAAEV 173
            FG+P++VAPMEAE+QCA LE LGLV+GVVTDDSD ++FG   VYKNIFDDKKYVEAY   DA REIG+G  E   LALLLGSDYT+GVRGVGIVNAMEI+ AF      P   L  F+ WLD ++   +   R+    P    +   +F  +H  AR RW    GFP   V
Sbjct:  573 FGIPFLVAPMEAESQCAMLEELGLVEGVVTDDSDAFLFGAETVYKNIFDDKKYVEAYLAEDARREIGIGRQEFVCLALLLGSDYTDGVRGVGIVNAMEIMEAFPPAAENPLEGLRGFKNWLDSYNPVDDALGRQADAPPEGASAARKRFEDKHKGARRRWTVGNGFPERAV 743

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig15021.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig15021.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FZY4_ECTSI	3.840e-64	61.71	DNA repair enzyme n=1 Tax=Ectocarpus siliculosus T...	[more]
A0A6H5KXJ8_9PHAE	1.320e-63	61.14	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A836CHS7_9STRA	4.130e-59	57.69	XPGI domain-containing protein n=1 Tax=Tribonema m...	[more]
A0A1E7FI38_9STRA	1.170e-57	55.06	XPG_I-domain-containing protein n=1 Tax=Fragilario...	[more]
B8C7S2_THAPS	3.370e-57	55.75	DNA repair enzyme (Fragment) n=1 Tax=Thalassiosira...	[more]
A0A7S0UIJ3_9STRA	4.800e-57	59.09	Hypothetical protein n=1 Tax=Pseudo-nitzschia deli...	[more]
A0A7S4MZJ3_9STRA	2.500e-55	58.76	Hypothetical protein n=1 Tax=Odontella aurita TaxI...	[more]
K0SHA9_THAOC	2.870e-55	54.71	XPGI domain-containing protein (Fragment) n=2 Tax=...	[more]
A0A448ZIR6_9STRA	3.010e-53	56.98	Ig-like domain-containing protein (Fragment) n=2 T...	[more]
A0A7S2WUF9_9STRA	5.450e-53	55.56	Hypothetical protein (Fragment) n=1 Tax=Rhizochrom...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006084	XPG/Rad2 endonuclease	PRINTS	PR00853	XPGRADSUPER	coord: 75..90 score: 47.07 coord: 21..41 score: 45.09
IPR008918	Helix-hairpin-helix motif, class 2	SMART	SM00279	HhH_4	coord: 72..105 e-value: 3.8E-8 score: 43.1
IPR006086	XPG-I domain	SMART	SM00484	xpgineu	coord: 1..70 e-value: 1.1E-29 score: 114.6
IPR006086	XPG-I domain	PFAM	PF00867	XPG_I	coord: 4..85 e-value: 3.8E-25 score: 88.1
None	No IPR available	GENE3D	1.10.150.20		coord: 70..138 e-value: 1.8E-8 score: 36.3
None	No IPR available	GENE3D	3.40.50.1010		coord: 1..69 e-value: 4.6E-26 score: 93.8
None	No IPR available	PANTHER	PTHR16171	DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS-RELATED	coord: 1..173
None	No IPR available	PANTHER	PTHR16171:SF7	DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS	coord: 1..173
None	No IPR available	CDD	cd09868	PIN_XPG_RAD2	coord: 1..68 e-value: 5.10109E-44 score: 143.042
IPR019974	XPG conserved site	PROSITE	PS00842	XPG_2	coord: 4..18
IPR029060	PIN-like domain superfamily	SUPERFAMILY	88723	PIN domain-like	coord: 2..85
IPR036279	5'-3' exonuclease, C-terminal domain superfamily	SUPERFAMILY	47807	5' to 3' exonuclease, C-terminal subdomain	coord: 71..130

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig15021	contig	P-wetherbeei_contig15021:185..1434 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig15021.1.1	mRNA_P-wetherbeei_contig15021.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig15021 185..1434 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig15021.1.1 ID=prot_P-wetherbeei_contig15021.1.1|Name=mRNA_P-wetherbeei_contig15021.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=173bp
QAFGVPYIVAPMEAEAQCAELERLGLVDGVVTDDSDVWVFGGRVVYKNIF
DDKKYVEAYYLTDAEREIGLGTDEMRALALLLGSDYTEGVRGVGIVNAME
ILRAFSCEGHGPAHSLERFREWLDGFDFEVEKPKRRRRGEPLPVLSEVHQ
FHVRHCAARHRWVAPPGFPAAEV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006084	XPG/Rad2
IPR008918	HhH2
IPR006086	XPG-I_dom
IPR019974	XPG_CS
IPR029060	PIN-like_dom_sf
IPR036279	5-3_exonuclease_C_sf