mRNA_P-wetherbeei_contig15014.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15014.1.1
Unique NamemRNA_P-wetherbeei_contig15014.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15014.1.1 vs. uniprot
Match: A0A7S1UK76_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UK76_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 1.990e-21
Identity = 45/105 (42.86%), Postives = 62/105 (59.05%), Query Frame = 1
Query:    1 EIGITMYNFGSPRVGDPFFVRRYNQLVPNSFRFVCDGDVVTGVPPARF---GFMHVGSAAISDKTGSGSLLIDPSLLEASFKTSRTLKVLNHLFPAYLAALDGCL 306
             I ++ Y FG PRVG+  +   Y+Q+VPN +R   DGDVVT  P A +    + HVG   + DK G GSL++DPS +E SF+T     V +HL  +Y   L+G L
Sbjct:   56 RISLSCYTFGQPRVGNSTWATTYDQMVPNMYRVTVDGDVVTNAPRAGYTCLSWKHVGVGIVIDKEGRGSLIVDPSFVERSFRTKSRRSVSSHLLNSYRCGLEGVL 160          
BLAST of mRNA_P-wetherbeei_contig15014.1.1 vs. uniprot
Match: A0A7S0SWE1_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SWE1_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 1.110e-20
Identity = 44/99 (44.44%), Postives = 64/99 (64.65%), Query Frame = 1
Query:    4 IGITMYNFGSPRVGDPFFVRRYNQLVPNSFRFVCDGDVVTGVPPARFGFMHVGSAAISDKTGSGSLLIDPSLLEASFKTSRTLKVLNHLFPAYLAALDG 300
            I I MYNFGSP+ G+  F + Y+++VPNSFR + DGD++T +PP+  G+ H+G+A + D  GSGS++IDPS +E   +T     V  H    Y   L+G
Sbjct:  100 INICMYNFGSPKCGNNSFKQLYDRIVPNSFRVIVDGDLITRLPPS--GYSHIGTAVVVDSLGSGSIIIDPSFVERWLRTQTKASVSAHSLLIYRKGLEG 196          
BLAST of mRNA_P-wetherbeei_contig15014.1.1 vs. uniprot
Match: A0A7S2DGL2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DGL2_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 5.580e-20
Identity = 48/101 (47.52%), Postives = 64/101 (63.37%), Query Frame = 1
Query:    4 IGITMYNFGSPRVGDPFFVRRYNQLVPNSFRFVCDGDVVTGVPPARFGFMHVGSAAISDKTGSGSLLIDPSLLEASFKTSRTLKVLNHLFPAYLAALDGCL 306
            I I MYNFGSPRVG+  F  RY+ L+PN FR V DGD+VTG+P  R  + HVG+  + D   +GSL++DPS +E +F+T     + +H    Y  AL  CL
Sbjct:  456 IRIGMYNFGSPRVGNFAFASRYDDLIPNCFRVVVDGDIVTGIP--RAWYKHVGTEVVVDC--AGSLIVDPSFVERAFQTMAKRSLASHSLAVYRPALRSCL 552          
BLAST of mRNA_P-wetherbeei_contig15014.1.1 vs. uniprot
Match: A0A7S3Y5L6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5L6_HETAK)

HSP 1 Score: 92.0 bits (227), Expect = 1.430e-19
Identity = 50/103 (48.54%), Postives = 63/103 (61.17%), Query Frame = 1
Query:    1 EIGITMYNFGSPRVGDPFFVRRYNQLVPNSFRFVCDGDVVTGVPPARFGFMHVGSAAISDKTGSGSLLIDPSLLEASFKTSRTLKVLNHLFPAY---LAALDG 300
             +  TMYNFGSPRVG+  F   YN++VP SFR V DGDVV G+PP R  + H+G+  I D  G GS++IDPS +E  F+T     V  H    Y   LAA+ G
Sbjct:  526 RVEATMYNFGSPRVGNHPFRYAYNKMVPGSFRVVTDGDVVAGLPP-RLWYQHLGTEVIIDGDGGGSMIIDPSQMEKRFQTRARAHVRLHHMDCYRRGLAAILG 627          
BLAST of mRNA_P-wetherbeei_contig15014.1.1 vs. uniprot
Match: D7G7X3_ECTSI (Lipase_3 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7X3_ECTSI)

HSP 1 Score: 90.5 bits (223), Expect = 2.650e-19
Identity = 45/100 (45.00%), Postives = 61/100 (61.00%), Query Frame = 1
Query:    1 EIGITMYNFGSPRVGDPFFVRRYNQLVPNSFRFVCDGDVVTGVPPARFGFMHVGSAAISDKTGSGSLLIDPSLLEASFKTSRTLKVLNHLFPAYLAALDG 300
            ++ + MY+FG+PR G+  +  RYN +VP+SFR V DGD V GVP   + + HVG+  + D  G GSL+IDPS +E  F T     VL+H  P Y   L G
Sbjct:   98 KLELCMYSFGAPRAGNAIYAARYNDVVPDSFRVVVDGDPVPGVP--SWWYTHVGTKVLIDGHGRGSLIIDPSFVEKRFFTRSKRHVLSHRIPNYQTGLRG 195          
BLAST of mRNA_P-wetherbeei_contig15014.1.1 vs. uniprot
Match: A0A812RKV5_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RKV5_SYMMI)

HSP 1 Score: 90.9 bits (224), Expect = 3.000e-19
Identity = 43/100 (43.00%), Postives = 60/100 (60.00%), Query Frame = 1
Query:    1 EIGITMYNFGSPRVGDPFFVRRYNQLVPNSFRFVCDGDVVTGVPPARFGFMHVGSAAISDKTGSGSLLIDPSLLEASFKTSRTLKVLNHLFPAYLAALDG 300
             + + MYNFG+PRVG+  F   YN++VPNSFR V DGD+V+GVP   +   H+G+  I D  G+GS++IDPS +E   +T     +  H    Y   L G
Sbjct:  182 RVRMCMYNFGTPRVGNWHFATEYNRIVPNSFRIVVDGDIVSGVPKGNY--KHIGTEIIVDPLGAGSIIIDPSFVEKFLRTHNKTSMSVHSLVFYRRGLQG 279          
BLAST of mRNA_P-wetherbeei_contig15014.1.1 vs. uniprot
Match: A0A1W0A2H2_9STRA (Lipase_3 domain-containing protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2H2_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 9.390e-19
Identity = 46/99 (46.46%), Postives = 59/99 (59.60%), Query Frame = 1
Query:   10 ITMYNFGSPRVGDPFFVRRYNQLVPNSFRFVCDGDVVTGVPPARFGFMHVGSAAISDKTGSGSLLIDPSLLEASFKTSRTLKVLNHLFPAYLAALDGCL 306
            I MYNFG PRVG+P FVR+YN  VPNSFR V DGD+V G+P     + HVGS    D   +G++++DPS +E     S   KV +H    Y   L  C+
Sbjct:  731 IHMYNFGGPRVGNPAFVRQYNNKVPNSFRIVFDGDLVAGIPRFWGLYEHVGSEVAIDD--AGNVIVDPSFVERRLLVSSKTKVASHATLVYRTGLRNCM 827          
BLAST of mRNA_P-wetherbeei_contig15014.1.1 vs. uniprot
Match: D8LEN4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEN4_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 1.320e-18
Identity = 45/100 (45.00%), Postives = 62/100 (62.00%), Query Frame = 1
Query:    1 EIGITMYNFGSPRVGDPFFVRRYNQLVPNSFRFVCDGDVVTGVPPARFGFMHVGSAAISDKTGSGSLLIDPSLLEASFKTSRTLKVLNHLFPAYLAALDG 300
            ++ + MY+FG+PR G+  F  R +++VP+SFR V DGD V G+P  R+   H G+ A+ D  G GSL+IDPS +E  F       VL+HL  AY A L G
Sbjct: 1285 KVELRMYSFGAPRAGNSIFAARCDEVVPDSFRVVVDGDPVPGIPSWRYA--HAGTQALIDGRGRGSLIIDPSFVEKRFFARSKRHVLSHLVHAYQAGLRG 1382          
BLAST of mRNA_P-wetherbeei_contig15014.1.1 vs. uniprot
Match: A0A7S1ULZ9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1ULZ9_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 1.410e-17
Identity = 38/83 (45.78%), Postives = 52/83 (62.65%), Query Frame = 1
Query:    1 EIGITMYNFGSPRVGDPFFVRRYNQLVPNSFRFVCDGDVVTGVPPARF---GFMHVGSAAISDKTGSGSLLIDPSLLEASFKT 240
             I ++ Y FG PRVG+  +   Y+Q+VPN +R   DGDVVT  P A +    + HVG   + DK G GSL++DPS +E SF+T
Sbjct:   56 RISLSCYTFGQPRVGNSTWATTYDQMVPNMYRVTVDGDVVTNAPRAGYTCLSWKHVGVGIVIDKEGRGSLIVDPSFVERSFRT 138          
BLAST of mRNA_P-wetherbeei_contig15014.1.1 vs. uniprot
Match: A0A7S4VHR9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VHR9_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 5.800e-15
Identity = 37/98 (37.76%), Postives = 61/98 (62.24%), Query Frame = 1
Query:    1 EIGITMYNFGSPRVGDPFFVRRYNQLVPNSFRFVCDGDVVTGVPPARFGFMHVGSAAISDKTGSGSLLIDPSLLEASFKTSRTLKVLNHLFPAYLAAL 294
            ++ ++ Y +GSP+VG PF+   YNQ+VP++ R VCDGD++T  P    G++HV + +I D TGS  + +DP+L+E      +  K  +H    YL+ +
Sbjct: 1045 KLKVSCYTYGSPKVGGPFWAAAYNQVVPDTQRIVCDGDIITSGP--FMGYLHVKTESIFDFTGS--VRVDPNLMEKQITLKKRNKASSHFLSNYLSVI 1138          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15014.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1UK76_9STRA1.990e-2142.86Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S0SWE1_9STRA1.110e-2044.44Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A7S2DGL2_9STRA5.580e-2047.52Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3Y5L6_HETAK1.430e-1948.54Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
D7G7X3_ECTSI2.650e-1945.00Lipase_3 domain-containing protein n=1 Tax=Ectocar... [more]
A0A812RKV5_SYMMI3.000e-1943.00Hypothetical protein (Fragment) n=1 Tax=Symbiodini... [more]
A0A1W0A2H2_9STRA9.390e-1946.46Lipase_3 domain-containing protein (Fragment) n=1 ... [more]
D8LEN4_ECTSI1.320e-1845.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1ULZ9_9STRA1.410e-1745.78Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S4VHR9_9STRA5.800e-1537.76Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15014contigP-wetherbeei_contig15014:939..1589 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog112098.XP_008605195.1
PFAMsAnk_2,Lipase_3,MIG-14_Wnt-bd
Model size306
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue4.4e-19
EggNOG OGsKOG4569@1|root,KOG4569@2759|Eukaryota
Descriptionphospholipase A1 activity
Cds size291
COG categoryG
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186041.3894136-CDS-P-wetherbeei_contig15014:938..12061683186041.3894136-CDS-P-wetherbeei_contig15014:938..1206Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15014 939..1206 -
1683186041.4005578-CDS-P-wetherbeei_contig15014:1551..15741683186041.4005578-CDS-P-wetherbeei_contig15014:1551..1574Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15014 1552..1574 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186041.4092546-UTR-P-wetherbeei_contig15014:1574..15891683186041.4092546-UTR-P-wetherbeei_contig15014:1574..1589Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig15014 1575..1589 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15014.1.1prot_P-wetherbeei_contig15014.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15014 939..1574 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15014.1.1

>prot_P-wetherbeei_contig15014.1.1 ID=prot_P-wetherbeei_contig15014.1.1|Name=mRNA_P-wetherbeei_contig15014.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=97bp
MYNFGSPRVGDPFFVRRYNQLVPNSFRFVCDGDVVTGVPPARFGFMHVGS
AAISDKTGSGSLLIDPSLLEASFKTSRTLKVLNHLFPAYLAALDGCL
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mRNA from alignment at P-wetherbeei_contig15014:939..1589-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15014.1.1 ID=mRNA_P-wetherbeei_contig15014.1.1|Name=mRNA_P-wetherbeei_contig15014.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=651bp|location=Sequence derived from alignment at P-wetherbeei_contig15014:939..1589- (Phaeothamnion wetherbeei SAG_119_79)
GAGATCGGTATCACCATGTACAACTTCGGCAGCCCGCGGTGCGTGCTCTT GCAGGGATTGCAGCGGCAGAAATGTGTTCGTGCAGCAGACCGAATGCCAC CTTGAGGCTAGCTTGCTAGGACTTTTGCTCCTTTCCGAGTCTTCGGAGAA TCGAGAGCTGTCATAGCTCTTGAAAGCTCAGTTATGCCGTGGGGGCTCTA GTTCACGGCCCCGAGGTCATTTCGGCAGAGGAAGGCAGTTTCTGCGCTTG AGAGATTGTTCAGGCCTTGTTGCGTTTCCTGCGAATATAGCTGCGAGAAC GGGAGCACCCTTTCGCTCTCGGCTAAGCATCTGGCGCGTTTCAGTTGACG TTGCTTCCCAACTCGTTCCTCGCACGATTGCAGGGTAGGCGACCCGTTCT TTGTGCGACGCTATAACCAGCTCGTCCCGAACTCCTTCCGTTTCGTCTGC GACGGCGACGTCGTGACCGGAGTCCCGCCGGCACGCTTCGGCTTCATGCA CGTCGGGTCCGCGGCAATCTCGGACAAGACCGGGAGCGGATCCCTCCTTA TCGACCCGTCCCTCCTGGAGGCGTCCTTCAAGACCAGCCGGACCCTCAAG GTGCTGAACCATCTCTTCCCGGCCTACCTGGCGGCGCTCGACGGCTGCCT T
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Coding sequence (CDS) from alignment at P-wetherbeei_contig15014:939..1589-

>mRNA_P-wetherbeei_contig15014.1.1 ID=mRNA_P-wetherbeei_contig15014.1.1|Name=mRNA_P-wetherbeei_contig15014.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=291bp|location=Sequence derived from alignment at P-wetherbeei_contig15014:939..1589- (Phaeothamnion wetherbeei SAG_119_79)
ATGTACAACTTCGGCAGCCCGCGGGTAGGCGACCCGTTCTTTGTGCGACG
CTATAACCAGCTCGTCCCGAACTCCTTCCGTTTCGTCTGCGACGGCGACG
TCGTGACCGGAGTCCCGCCGGCACGCTTCGGCTTCATGCACGTCGGGTCC
GCGGCAATCTCGGACAAGACCGGGAGCGGATCCCTCCTTATCGACCCGTC
CCTCCTGGAGGCGTCCTTCAAGACCAGCCGGACCCTCAAGGTGCTGAACC
ATCTCTTCCCGGCCTACCTGGCGGCGCTCGACGGCTGCCTT
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