mRNA_P-wetherbeei_contig15012.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15012.2.1 vs. uniprot
Match: A0A7C3NX28_9PROT (Polymer-forming cytoskeletal family protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C3NX28_9PROT) HSP 1 Score: 219 bits (557), Expect = 2.330e-71 Identity = 108/136 (79.41%), Postives = 121/136 (88.97%), Query Frame = 1
Query: 1 MFGNGKTNKPQNRIDCLIGAGTIIDGNITFNGGLRVDGHVRGNVNAAEDKPGTLVLSEQAHIEGEIRVSHAVINGTIVGPVHAGEYAELQAKANVTGDVYYRTLEVQLGAVVQGRLVYQPEGKSDKVVQLKPATAD 408
MFG ++KPQNRIDCLIGAGT I+GNITF GGLRVDG VRGNV AA+ KPGTLVLSEQA IEGEIRVSH VINGT++GPV A EY ELQ+KANVTGDV+Y+TLE+QLGAVVQGRLVYQ + KS+KVVQLKPA+AD
Sbjct: 1 MFGRKASSKPQNRIDCLIGAGTTIEGNITFTGGLRVDGRVRGNVTAADSKPGTLVLSEQAQIEGEIRVSHVVINGTVIGPVDAAEYVELQSKANVTGDVHYKTLEMQLGAVVQGRLVYQSDSKSEKVVQLKPASAD 136
BLAST of mRNA_P-wetherbeei_contig15012.2.1 vs. uniprot
Match: A0A1F4CS64_9PROT (Cell shape determination protein CcmA n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13 TaxID=1797495 RepID=A0A1F4CS64_9PROT) HSP 1 Score: 218 bits (555), Expect = 4.550e-71 Identity = 110/136 (80.88%), Postives = 120/136 (88.24%), Query Frame = 1
Query: 1 MFGNGKTNKPQNRIDCLIGAGTIIDGNITFNGGLRVDGHVRGNVNAAEDKPGTLVLSEQAHIEGEIRVSHAVINGTIVGPVHAGEYAELQAKANVTGDVYYRTLEVQLGAVVQGRLVYQPEGKSDKVVQLKPATAD 408
MFG+ K +KPQNRIDCLIGAGT+++GNITF GGLRVDGHVRGNV A+ KPGTLV+SEQAHIEGEI VSHAVING + G VHA EY ELQ KANVTGDV+Y TLEVQLGAVVQGRLVYQ E KSDKVVQLKPA+AD
Sbjct: 1 MFGS-KRSKPQNRIDCLIGAGTVVEGNITFTGGLRVDGHVRGNVAVADGKPGTLVVSEQAHIEGEIHVSHAVINGMVTGSVHAAEYIELQPKANVTGDVHYTTLEVQLGAVVQGRLVYQNESKSDKVVQLKPASAD 135
BLAST of mRNA_P-wetherbeei_contig15012.2.1 vs. uniprot
Match: A0A1F4DGY7_9PROT (Cell shape determination protein CcmA n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4DGY7_9PROT) HSP 1 Score: 216 bits (550), Expect = 2.630e-70 Identity = 108/136 (79.41%), Postives = 117/136 (86.03%), Query Frame = 1
Query: 1 MFGNGKTNKPQNRIDCLIGAGTIIDGNITFNGGLRVDGHVRGNVNAAEDKPGTLVLSEQAHIEGEIRVSHAVINGTIVGPVHAGEYAELQAKANVTGDVYYRTLEVQLGAVVQGRLVYQPEGKSDKVVQLKPATAD 408
MFGN K+NKP+NRIDCLIGAGT I+GNITF GGLRVDGHVRGNV + KP TLV+SEQA IEGEIRVSH VINGT+ GPVHA EY ELQ KANVTGDVYY+TLE+QLGAVVQGRLVYQ + KSDKVVQ KPA D
Sbjct: 1 MFGN-KSNKPKNRIDCLIGAGTTIEGNITFAGGLRVDGHVRGNVLTTDGKPSTLVVSEQAQIEGEIRVSHVVINGTVAGPVHAAEYVELQPKANVTGDVYYKTLEIQLGAVVQGRLVYQNDSKSDKVVQFKPAAGD 135
BLAST of mRNA_P-wetherbeei_contig15012.2.1 vs. uniprot
Match: A0A1F4BM98_9PROT (Cell shape determination protein CcmA n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26 TaxID=1797492 RepID=A0A1F4BM98_9PROT) HSP 1 Score: 212 bits (540), Expect = 8.790e-69 Identity = 108/136 (79.41%), Postives = 117/136 (86.03%), Query Frame = 1
Query: 1 MFGNGKTNKPQNRIDCLIGAGTIIDGNITFNGGLRVDGHVRGNVNAAEDKPGTLVLSEQAHIEGEIRVSHAVINGTIVGPVHAGEYAELQAKANVTGDVYYRTLEVQLGAVVQGRLVYQPEGKSDKVVQLKPATAD 408
MFG+ K NKP N I+CLIGAGT I+GNITF GGL VDG VRG+V AAE KPG LVLSEQA IEGEIRVSH VINGT+VGPVHA EY ELQAKANVTGDVYY+TLE+QLGAVVQGRLVYQ +GKSDKVVQ KP A+
Sbjct: 1 MFGS-KRNKPSNHIECLIGAGTTIEGNITFAGGLHVDGRVRGDVVAAEGKPGRLVLSEQAQIEGEIRVSHVVINGTVVGPVHAAEYVELQAKANVTGDVYYKTLEIQLGAVVQGRLVYQNDGKSDKVVQFKPVAAE 135
BLAST of mRNA_P-wetherbeei_contig15012.2.1 vs. uniprot
Match: A0A3N5WIX3_9PROT (Polymer-forming cytoskeletal family protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3N5WIX3_9PROT) HSP 1 Score: 207 bits (528), Expect = 5.930e-67 Identity = 104/136 (76.47%), Postives = 118/136 (86.76%), Query Frame = 1
Query: 1 MFGNGKTNKPQNRIDCLIGAGTIIDGNITFNGGLRVDGHVRGNVNAAEDKPGTLVLSEQAHIEGEIRVSHAVINGTIVGPVHAGEYAELQAKANVTGDVYYRTLEVQLGAVVQGRLVYQPEGKSDKVVQLKPATAD 408
MFG T KPQNRIDCLIGAGT++ G++TF+GGLRVDG V GNV +AE KPGTLVLSE A IEGEIRVSH VINGT+VGPVHA +Y ELQ+KANVTGDVYYRTLE+QLGAVVQGRLVYQ + K+DKV++ KPA AD
Sbjct: 1 MFGKKHT-KPQNRIDCLIGAGTVVKGDLTFDGGLRVDGQVHGNVFSAEGKPGTLVLSEAARIEGEIRVSHVVINGTVVGPVHAADYVELQSKANVTGDVYYRTLEMQLGAVVQGRLVYQDDIKADKVLKFKPAAAD 135
BLAST of mRNA_P-wetherbeei_contig15012.2.1 vs. uniprot
Match: A0A0S8C392_9PROT (Cell shape determination protein CcmA n=1 Tax=Betaproteobacteria bacterium SG8_41 TaxID=1703391 RepID=A0A0S8C392_9PROT) HSP 1 Score: 206 bits (524), Expect = 2.490e-66 Identity = 100/136 (73.53%), Postives = 119/136 (87.50%), Query Frame = 1
Query: 1 MFGNGKTNKPQNRIDCLIGAGTIIDGNITFNGGLRVDGHVRGNVNAAEDKPGTLVLSEQAHIEGEIRVSHAVINGTIVGPVHAGEYAELQAKANVTGDVYYRTLEVQLGAVVQGRLVYQPEGKSDKVVQLKPATAD 408
MFG+ KPQ+RIDCLIGAGT ++GNI F GGLRVDG VRGNV++A+ KPGTLVLSEQA IEGEI VSH VING+I+GPV+AGEY ELQAKANVTGDV+Y+TLE+ LGAVVQGRLV++ +GK++KVV KPA+AD
Sbjct: 1 MFGDKGKTKPQSRIDCLIGAGTTVEGNIIFTGGLRVDGRVRGNVSSADGKPGTLVLSEQAQIEGEIHVSHVVINGSIIGPVYAGEYVELQAKANVTGDVHYKTLEMHLGAVVQGRLVFETDGKAEKVVPFKPASAD 136
BLAST of mRNA_P-wetherbeei_contig15012.2.1 vs. uniprot
Match: A0A7C2UFK0_9PROT (Polymer-forming cytoskeletal family protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C2UFK0_9PROT) HSP 1 Score: 197 bits (500), Expect = 1.090e-62 Identity = 99/136 (72.79%), Postives = 112/136 (82.35%), Query Frame = 1
Query: 1 MFGNGKTNKPQNRIDCLIGAGTIIDGNITFNGGLRVDGHVRGNVNAAEDKPGTLVLSEQAHIEGEIRVSHAVINGTIVGPVHAGEYAELQAKANVTGDVYYRTLEVQLGAVVQGRLVYQPEGKSDKVVQLKPATAD 408
MFGN K +KPQNRIDCLIGAGT ++GNITF GGLR+DG V GNV AA D+ GTLV+SE A ++GEI VSHAVINGT+ GPVHA EY ELQ KANVTGDV+Y+ LEV LGAVVQGRL++ GK DKVVQ KPA AD
Sbjct: 1 MFGN-KRSKPQNRIDCLIGAGTTVEGNITFAGGLRIDGKVSGNVTAARDETGTLVVSEHARVDGEIHVSHAVINGTVQGPVHADEYLELQPKANVTGDVHYQALEVHLGAVVQGRLIHAAPGKPDKVVQFKPAGAD 135
BLAST of mRNA_P-wetherbeei_contig15012.2.1 vs. uniprot
Match: A0A0S8DH77_9PROT (Cell shape determination protein CcmA n=1 Tax=Betaproteobacteria bacterium SG8_40 TaxID=1703389 RepID=A0A0S8DH77_9PROT) HSP 1 Score: 186 bits (472), Expect = 1.890e-58 Identity = 95/130 (73.08%), Postives = 109/130 (83.85%), Query Frame = 1
Query: 1 MFGNGKTNKPQNRIDCLIGAGTIIDGNITFNGGLRVDGHVRGNVNAAEDKPGTLVLSEQAHIEGEIRVSHAVINGTIVGPVHAGEYAELQAKANVTGDVYYRTLEVQLGAVVQGRLVYQPEGKSDKVVQL 390
MFGN K KPQNRID L+GAGT+I+GNI F+GGLRVDG VRG V A+D+P TLVLSE+A IEGEIRVSHAVINGT+VGPV EY ELQ K+NVTGDV+YRTLE+QLGAVVQGRLV++ E + KVV L
Sbjct: 1 MFGN-KPTKPQNRIDSLVGAGTVIEGNIAFSGGLRVDGRVRGTVLTADDQPSTLVLSEKAQIEGEIRVSHAVINGTVVGPVFGAEYVELQPKSNVTGDVHYRTLEIQLGAVVQGRLVHRDEDGTKKVVPL 129
BLAST of mRNA_P-wetherbeei_contig15012.2.1 vs. uniprot
Match: UPI0019BBFC6E (Polymer-forming cytoskeletal protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019BBFC6E) HSP 1 Score: 178 bits (451), Expect = 3.170e-55 Identity = 84/136 (61.76%), Postives = 112/136 (82.35%), Query Frame = 1
Query: 1 MFGNGKTNKPQNRIDCLIGAGTIIDGNITFNGGLRVDGHVRGNVNAAEDKPGTLVLSEQAHIEGEIRVSHAVINGTIVGPVHAGEYAELQAKANVTGDVYYRTLEVQLGAVVQGRLVYQPEGKSDKVVQLKPATAD 408
MFG +++KPQ+RIDCLIG+GT I GNITF+GGLRVDGH+RGN+ A +DKP T+VLSE+A ++GEIRVSH V+NGT+ GP+ + EY ELQ KA VTGDV YR +E+ LGA++QGRL+++ + +S+KVV KPA +
Sbjct: 1 MFGK-ESSKPQSRIDCLIGSGTEITGNITFSGGLRVDGHIRGNIIACDDKPSTVVLSEKARVDGEIRVSHVVVNGTVTGPIVSAEYVELQPKAVVTGDVSYRKIEIHLGAILQGRLLHEDDLRSEKVVPFKPAVVE 135
BLAST of mRNA_P-wetherbeei_contig15012.2.1 vs. uniprot
Match: A0A2W5HPX5_9RHOO (Cell shape determination protein CcmA n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A2W5HPX5_9RHOO) HSP 1 Score: 172 bits (436), Expect = 6.480e-53 Identity = 88/133 (66.17%), Postives = 108/133 (81.20%), Query Frame = 1
Query: 16 KTNKPQNRIDCLIGAGTIIDGNITFNGGLRVDGHVRGNVNAAEDKPGTLVLSEQAHIEGEIRVSHAVINGTIVGPVHAGEYAELQAKANVTGDVYYRTLEVQLGAVVQGRLVY-QP-EGKSDKVVQLKPATAD 408
K KP NRID LIGAGT IDG++ F+GGLR+DGHVRGNV A++++ TLVLSE A +EGEIRVSHAVINGT+VGPVHA EY ELQ K+ V GDV+Y +E+Q+GAVV G+LV+ QP E + +KVV L+PAT D
Sbjct: 5 KPTKPHNRIDSLIGAGTRIDGDVVFSGGLRIDGHVRGNVIASDEEACTLVLSENATVEGEIRVSHAVINGTVVGPVHASEYLELQGKSRVKGDVHYAIIEIQVGAVVDGQLVHDQPAEAEGEKVVALRPATGD 137 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15012.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15012.2.1 >prot_P-wetherbeei_contig15012.2.1 ID=prot_P-wetherbeei_contig15012.2.1|Name=mRNA_P-wetherbeei_contig15012.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=137bp MFGNGKTNKPQNRIDCLIGAGTIIDGNITFNGGLRVDGHVRGNVNAAEDKback to top mRNA from alignment at P-wetherbeei_contig15012:861..1271+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15012.2.1 ID=mRNA_P-wetherbeei_contig15012.2.1|Name=mRNA_P-wetherbeei_contig15012.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=411bp|location=Sequence derived from alignment at P-wetherbeei_contig15012:861..1271+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15012:861..1271+ >mRNA_P-wetherbeei_contig15012.2.1 ID=mRNA_P-wetherbeei_contig15012.2.1|Name=mRNA_P-wetherbeei_contig15012.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=411bp|location=Sequence derived from alignment at P-wetherbeei_contig15012:861..1271+ (Phaeothamnion wetherbeei SAG_119_79)back to top |