mRNA_P-wetherbeei_contig15012.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15012.1.1 vs. uniprot
Match: A0A7C3NTA3_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C3NTA3_9PROT) HSP 1 Score: 268 bits (685), Expect = 2.400e-87 Identity = 139/245 (56.73%), Postives = 178/245 (72.65%), Query Frame = 1
Query: 4 IKRLKRMFGISAPQMAVRAAVPWYVRWLTLIALALVILFLSRATYDFGKKFAGFDQSEADQEVQRLAATNAKMQQDLAQMRXXXXXXXXXXXXXXXXYADLVKQMKSLTEENAGLKEDLAFFQTLMPSGGKEGGVAVNRFLVQNDALPGEYRYRLLLTQTGQRNKDFQGSLQFVVNLQQGDKKAVLTLPAEGEAD-KAVKLNFRFYQRVEGTFRVANGAVVKSMQVRVFENGSKEPKLTQAVNAS 735
I+ L+R FGI+AP+MAVR V WY RWL L AL ++ + ATYDFG +FAGF QSEA +E+ +L K ++A+MR Y DL KQ+K+L EENA L+EDLAFFQ+LM +GGK+G +AVNRF VQ D LPGEYRYRLLL QTGQR K+F+G L+F++NL+QGD+K VL LP EG+ + +L+F+F+QR+EGTF++A AVVKSMQVRVFENG+ +PKLTQ VN S
Sbjct: 6 IRTLQRKFGIAAPRMAVRTHVAWYWRWLGLAALGAAVVGIGWATYDFGMEFAGFRQSEAQRELAKLTDEIRKRDAEIAEMRFKVAEAERQLQIERATYGDLAKQVKTLAEENAALREDLAFFQSLMAAGGKQGSIAVNRFRVQRDTLPGEYRYRLLLVQTGQRVKEFRGELRFLLNLEQGDRKFVLMLPPEGDRQAREFQLSFKFFQRIEGTFKIAPDAVVKSMQVRVFENGASQPKLTQTVNVS 250
BLAST of mRNA_P-wetherbeei_contig15012.1.1 vs. uniprot
Match: A0A1F4DH06_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4DH06_9PROT) HSP 1 Score: 262 bits (670), Expect = 3.970e-85 Identity = 136/246 (55.28%), Postives = 177/246 (71.95%), Query Frame = 1
Query: 1 LIKRLKRMFGISAPQMAVRAAVPWYVRWLTLIALALVILFLSRATYDFGKKFAGFDQSEADQEVQRLAATNAKMQQDLAQMRXXXXXXXXXXXXXXXXYADLVKQMKSLTEENAGLKEDLAFFQTLMPSGGKEGGVAVNRFLVQNDALPGEYRYRLLLTQTGQRNKDFQGSLQFVVNLQQGDKKAVLTLPAEGEAD-KAVKLNFRFYQRVEGTFRVANGAVVKSMQVRVFENGSKEPKLTQAVNAS 735
++K LKR FGISA ++AV A VPWY+RWL +IA+ +++ + ATYDFG +FAGF Q EAD+ + +L + Q +LA++R Y DL KQ+KSLTEENA LKEDLAFFQ+LMP+ GK+G + +NRF +Q ALPGEYRY+LLL GQR K+FQGSLQFV+NLQQ D+K VLTLP E + + + +L+F+F+QR+EGTF++ A VK +QVRVFENGS PKLTQ VN S
Sbjct: 1 MLKTLKRKFGISASRVAVHAHVPWYLRWLGIIAVGALVVGVGWATYDFGMEFAGFRQGEADRALAKLNEAIKRQQDELAELRAKVAAAERQLQIERATYGDLAKQVKSLTEENATLKEDLAFFQSLMPAAGKDGAITINRFKLQPGALPGEYRYQLLLVHAGQRAKEFQGSLQFVLNLQQHDRKVVLTLPPENDRNAREYRLDFKFFQRLEGTFKIDADAEVKGLQVRVFENGSNAPKLTQTVNIS 246
BLAST of mRNA_P-wetherbeei_contig15012.1.1 vs. uniprot
Match: A0A0S8DH15_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium SG8_40 TaxID=1703389 RepID=A0A0S8DH15_9PROT) HSP 1 Score: 221 bits (562), Expect = 1.010e-68 Identity = 118/244 (48.36%), Postives = 157/244 (64.34%), Query Frame = 1
Query: 4 IKRLKRMFGISAPQMAVRAAVPWYVRWLTLIALALVILFLSRATYDFGKKFAGFDQSEADQEVQRLAATNAKMQQDLAQMRXXXXXXXXXXXXXXXXYADLVKQMKSLTEENAGLKEDLAFFQTLMPSGGKEGGVAVNRFLVQNDALPGEYRYRLLLTQTGQRNKDFQGSLQFVVNLQQGDKKAVLTLPAEGEADKAVKLNFRFYQRVEGTFRVANGAVVKSMQVRVFENGSKEPKLTQAVNAS 735
+K+L+R FGI+AP++AV++ VPWY RWLT +V + + YD G+++AGFD SEA RL N +++Q+ Q+R +L Q++ L+EENA LKEDLAFFQTLM SG GGV+VNRF V+ DALPGEYRY LL+ Q+ +R ++F G LQ +V+ K AV+T PAEGE +KA L F+FYQRVEGTF + AVV+ +QVRV +NG P TQA S
Sbjct: 6 LKKLRRRFGITAPRVAVQSHVPWYWRWLTSTVFLVVTIAAAWIAYDIGRRYAGFDSSEAAGAQSRLQEINEQLRQENGQLRNEIAAMERQLEIELAAQGNLTGQIRGLSEENALLKEDLAFFQTLMASGADPGGVSVNRFRVERDALPGEYRYHLLIVQSKKRVREFTGRLQLIVDYVADGKPAVMTFPAEGEDEKAYNLRFKFYQRVEGTFTLKPEAVVREVQVRVIQNGDSTPVSTQATTLS 249
BLAST of mRNA_P-wetherbeei_contig15012.1.1 vs. uniprot
Match: A0A1F4C9X9_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_64_23 TaxID=1797499 RepID=A0A1F4C9X9_9PROT) HSP 1 Score: 214 bits (546), Expect = 2.510e-66 Identity = 117/245 (47.76%), Postives = 161/245 (65.71%), Query Frame = 1
Query: 1 LIKRLKRMFGISAPQMAVRAAVPWYVRWLTLIALALVILFLSRATYDFGKKFAGFDQSEADQEVQRLAATNAKMQQDLAQMRXXXXXXXXXXXXXXXXYADLVKQMKSLTEENAGLKEDLAFFQTLMPSGGKEGGVAVNRFLVQNDALPGEYRYRLLLTQTGQRNKDFQGSLQFVVNLQQGDKKAVLTLPAEGEADKAVKLNFRFYQRVEGTFRVANGAVVKSMQVRVFENGSKEPKLTQAVNAS 735
L+KRL++ FGISAP+M V+ V WY R L L+ + L+ YD G++FAGFD SEA+QE+ RL K+ ++ A +R L +Q+K+L +EN LKEDLAFF+ L+PS ++ + +NRF V ALPGE+RYRLLL Q G+R+K FQG+LQ +V LQ+G K A++TLP EG A +A K++F+++QRVEGTFRVA GA VK + VR+FE GS + TQ+ N S
Sbjct: 4 LLKRLRQRFGISAPRMTVQTHVAWYWRMLGLVVVLSCSFALAAWMYDAGRRFAGFDSSEAEQELSRLREQAGKLTEETALLRASVNASDSKLQIERTAQTQLGRQVKALEDENVRLKEDLAFFENLIPSEHRDNTLLINRFRVDPGALPGEFRYRLLLLQGGRRDKPFQGNLQLLVTLQEGGKDAIITLPEEGAA-QAYKISFKYFQRVEGTFRVAPGAQVKMVSVRIFETGSAHVRATQSFNLS 247
BLAST of mRNA_P-wetherbeei_contig15012.1.1 vs. uniprot
Match: A0A7C2YE55_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C2YE55_9PROT) HSP 1 Score: 214 bits (545), Expect = 3.550e-66 Identity = 114/244 (46.72%), Postives = 161/244 (65.98%), Query Frame = 1
Query: 7 KRLKRMFGISAPQMAVRAAVPWYVRWLTLIALALVILFLSRATYDFGKKFAGFDQSEADQEVQRLAATNAKMQQDLAQMRXXXXXXXXXXXXXXXXYADLVKQMKSLTEENAGLKEDLAFFQTLMPSGGKEGGVAVNRFLVQNDALPGEYRYRLLLTQTGQRNKDFQGSLQFVVNLQQGDKKAVLTLPAEGEAD-KAVKLNFRFYQRVEGTFRVANGAVVKSMQVRVFENGSKEPKLTQAVNAS 735
+ L++ FGISAP++AVR +PWY R L ++A+ + + + YD F + +A V L T A+ +Q+LA++R YADL +++K+LTE+NA L+E++A FQ+LMP+G GG+AV RF ++ +A+PGEYRYRL L QTGQR +DFQG LQFVVN+ +G L LP EGE + + +L F+F+QRVEGTFRV+ A VKS+QVRV+E GS+ PKL Q VN +
Sbjct: 5 RSLRQRFGISAPRVAVRTHIPWYWRGLLILAVGTIAAWAGWSAYDGAGVVPPFLRGDAGT-VGELRHTIARQEQELAELRTRAVRAERQLEIGNATYADLAREIKALTEQNAALREEIALFQSLMPAGSGAGGIAVERFRLEKEAMPGEYRYRLFLVQTGQRERDFQGRLQFVVNIVEGSTARALVLPPEGEREGRDFQLKFKFFQRVEGTFRVSPDAAVKSVQVRVYEQGSRAPKLAQTVNVT 247
BLAST of mRNA_P-wetherbeei_contig15012.1.1 vs. uniprot
Match: A0A521XRI1_9PROT (Uncharacterized protein n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A521XRI1_9PROT) HSP 1 Score: 211 bits (538), Expect = 4.190e-65 Identity = 116/245 (47.35%), Postives = 161/245 (65.71%), Query Frame = 1
Query: 1 LIKRLKRMFGISAPQMAVRAAVPWYVRWLTLIALALVILFLSRATYDFGKKFAGFDQSEADQEVQRLAATNAKMQQDLAQMRXXXXXXXXXXXXXXXXYADLVKQMKSLTEENAGLKEDLAFFQTLMPSGGKEGGVAVNRFLVQNDALPGEYRYRLLLTQTGQRNKDFQGSLQFVVNLQQGDKKAVLTLPAEGEADKAVKLNFRFYQRVEGTFRVANGAVVKSMQVRVFENGSKEPKLTQAVNAS 735
L+K+ ++ FGISAP+M V V WY R L L+A+ L L+ YD G++FAGFD+SEA+QE+ +L + K+ Q+ A + L +Q+K+L +ENA LKEDLAFF+ L+P ++ + +NRF V ALPGE+RYRLLL Q G+R+K FQG+LQ +V LQQ K A++ LP EG A A K++F+++QRVEGTFRVA GA VK +QVR+FE GS + + TQ+ N S
Sbjct: 5 LLKKFRQRFGISAPRMTVTTHVAWYWRMLGLVAVLSCSLALAAWMYDAGRRFAGFDRSEAEQELSQLRESVGKLTQETASLHANVNASESKLQIERAAQTQLGRQVKALEDENARLKEDLAFFENLIPGEHRDNTLLINRFRVDPGALPGEFRYRLLLLQGGRRDKPFQGNLQLLVTLQQDGKAAIIALPEEGAAP-AYKISFKYFQRVEGTFRVAPGARVKMVQVRIFEGGSTQVRATQSFNLS 248
BLAST of mRNA_P-wetherbeei_contig15012.1.1 vs. uniprot
Match: A0A1I5ACQ2_9PROT (Uncharacterized protein n=3 Tax=Nitrosospira briensis TaxID=35799 RepID=A0A1I5ACQ2_9PROT) HSP 1 Score: 210 bits (535), Expect = 1.080e-64 Identity = 117/246 (47.56%), Postives = 157/246 (63.82%), Query Frame = 1
Query: 1 LIKRLKRMFGISAPQMAVRAAVPWYVRWLTLIALALVILFLSRATYDFGKKFAGFDQSEADQEVQRLAATNAKMQQDLAQMRXXXXXXXXXXXXXXXXYADLVKQMKSLTEENAGLKEDLAFFQTLMPSGGK-EGGVAVNRFLVQNDALPGEYRYRLLLTQTGQRNKDFQGSLQFVVNLQQGDKKAVLTLPAEGEADKAVKLNFRFYQRVEGTFRVANGAVVKSMQVRVFENGSKEPKLTQAVNAS 735
+IK LKR FGISAP++AVR P YV+WL + L + L LS YD G+KFAGFD++E E+ RL+ +NA++QQ+ ++R D+ +Q+KSL EN LKEDLAFFQ L + GK E V++ R ++ +LPGEYRY LLL Q GQR KDFQGSL+F VN +Q +K + +P A KAV +NF+FYQR+E TFR+ A V SM+V+VFE G + ++ Q VN S
Sbjct: 1 MIKSLKRKFGISAPRVAVRPQTPAYVKWLVVAVLTVSALVLSWGMYDAGQKFAGFDKNEISYELNRLSESNAQLQQENEELRMKVAGLDRQLQMDFVAREDITRQIKSLEHENTRLKEDLAFFQNLGSASGKAEQRVSIGRLKLERGSLPGEYRYSLLLVQGGQRPKDFQGSLEFAVNFEQNGEK--MMIPLADAASKAVDVNFKFYQRIENTFRLPPDATVDSMEVKVFEKGIAQARVMQTVNLS 244
BLAST of mRNA_P-wetherbeei_contig15012.1.1 vs. uniprot
Match: A0A3N5XHR2_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3N5XHR2_9PROT) HSP 1 Score: 208 bits (530), Expect = 6.780e-64 Identity = 115/245 (46.94%), Postives = 159/245 (64.90%), Query Frame = 1
Query: 4 IKRLKRMFGISAPQMAVRAAVPWYVRWLTLIALALVILFLSRATYDFGKKFAGFDQSEADQEVQRLAATNAKMQQDLAQMRXXXXXXXXXXXXXXXXYADLVKQMKSLTEENAGLKEDLAFFQTLMPSGGKEGGVAVNRFLVQNDALPGEYRYRLLLTQTGQRNKDFQGSLQFVVNLQQGDKKAVLTLPAEGE-ADKAVKLNFRFYQRVEGTFRVANGAVVKSMQVRVFENGSKEPKLTQAVNAS 735
+K + R FGI AP++AVR +PWY RW ++A ++ ++ TYDFG ++AGF Q EA + +L T Q +LA++ + DL +Q+KSL +ENA LKEDLAFF +L +G KEG ++VNRF + + +PGEYRY+LLL QTG+R K+F+G LQFV+NL Q +K VL LP + + A K +++F+ +QR+EG FRVA A VKS+QVRVFE S PKLT VN S
Sbjct: 5 LKAIVRRFGIDAPRLAVRPHMPWYWRWSGVVAGGALVTVVAWFTYDFGLEYAGFRQGEAVRLRAQLDETVRLQQAELAELNAKIAAAERQLQIERATFGDLARQVKSLAQENATLKEDLAFFHSLTATG-KEGAISVNRFRLMPETVPGEYRYQLLLVQTGERAKEFRGRLQFVLNLHQDGRKVVLMLPEDPKGASKEYQVSFKLFQRIEGMFRVAPDAAVKSLQVRVFEGSSNTPKLTHNVNLS 248
BLAST of mRNA_P-wetherbeei_contig15012.1.1 vs. uniprot
Match: A0A1F4CSF8_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13 TaxID=1797495 RepID=A0A1F4CSF8_9PROT) HSP 1 Score: 205 bits (521), Expect = 3.100e-63 Identity = 111/195 (56.92%), Postives = 136/195 (69.74%), Query Frame = 1
Query: 154 FAGFDQSEADQEVQRLAATNAKMQQDLAQMRXXXXXXXXXXXXXXXXYADLVKQMKSLTEENAGLKEDLAFFQTLMPSGGKEGGVAVNRFLVQNDALPGEYRYRLLLTQTGQRNKDFQGSLQFVVNLQQGDKKAVLTLPAEGEAD-KAVKLNFRFYQRVEGTFRVANGAVVKSMQVRVFENGSKEPKLTQAVNAS 735
FAGF QSEAD+ + +L T + QQ+ A++R Y +L KQ+KSL ENA LKEDLAFFQ+LM +G EG V +NRF VQ + LPGEYRYRLLL +TGQR K+F+GSLQ V+NL Q DK VLTLP E E + K +L+FRF+QR+EG F+VA A+VKS+QVRVFENGS PKLTQ V S
Sbjct: 3 FAGFRQSEADRALAKLNETIGRQQQENAELRAQVAHAERQLQIERATYGELAKQVKSLAGENAALKEDLAFFQSLMTAGRGEGAVTINRFTVQQETLPGEYRYRLLLVRTGQRAKEFRGSLQLVLNLVQDDKPVVLTLPPESEKNAKEYQLSFRFFQRIEGIFKVAPDAIVKSLQVRVFENGSNAPKLTQTVGVS 197
BLAST of mRNA_P-wetherbeei_contig15012.1.1 vs. uniprot
Match: A0A1F4BMB0_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26 TaxID=1797492 RepID=A0A1F4BMB0_9PROT) HSP 1 Score: 205 bits (521), Expect = 3.100e-63 Identity = 108/196 (55.10%), Postives = 141/196 (71.94%), Query Frame = 1
Query: 151 KFAGFDQSEADQEVQRLAATNAKMQQDLAQMRXXXXXXXXXXXXXXXXYADLVKQMKSLTEENAGLKEDLAFFQTLMPSGGKEGGVAVNRFLVQNDALPGEYRYRLLLTQTGQRNKDFQGSLQFVVNLQQGDKKAVLTLPAEGEAD-KAVKLNFRFYQRVEGTFRVANGAVVKSMQVRVFENGSKEPKLTQAVNAS 735
+ AGF QSEA + + L + ++ ++R Y DL +Q+K+L+ ENAGL+EDLAFFQ+LM +GGKEG V +NRF V+ +ALPGEYRYRLLL QTGQR K+FQG+LQFV+NL+QGD+K VL LP EGE D + +++F+F+QRVEGTF+VA AVVKS+Q+RVFENGS PKL+Q V S
Sbjct: 2 ELAGFRQSEAARVLDGLKEDIRSREAEITELRSQVASAERQMQIERATYGDLARQVKALSNENAGLREDLAFFQSLMAAGGKEGSVTINRFRVRPEALPGEYRYRLLLVQTGQRVKEFQGTLQFVLNLEQGDRKYVLMLPQEGERDVRDYQISFKFFQRVEGTFKVAPEAVVKSLQIRVFENGSVAPKLSQTVTVS 197 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15012.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15012.1.1 >prot_P-wetherbeei_contig15012.1.1 ID=prot_P-wetherbeei_contig15012.1.1|Name=mRNA_P-wetherbeei_contig15012.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=239bp MFGISAPQMAVRAAVPWYVRWLTLIALALVILFLSRATYDFGKKFAGFDQback to top mRNA from alignment at P-wetherbeei_contig15012:108..845+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15012.1.1 ID=mRNA_P-wetherbeei_contig15012.1.1|Name=mRNA_P-wetherbeei_contig15012.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=738bp|location=Sequence derived from alignment at P-wetherbeei_contig15012:108..845+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15012:108..845+ >mRNA_P-wetherbeei_contig15012.1.1 ID=mRNA_P-wetherbeei_contig15012.1.1|Name=mRNA_P-wetherbeei_contig15012.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=717bp|location=Sequence derived from alignment at P-wetherbeei_contig15012:108..845+ (Phaeothamnion wetherbeei SAG_119_79)back to top |