prot_P-wetherbeei_contig15.1.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig15.1.2
Unique Nameprot_P-wetherbeei_contig15.1.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length169
Homology
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BLAST of mRNA_P-wetherbeei_contig15.1.2 vs. uniprot
Match: A0A4D9CPF7_9STRA (F-box domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CPF7_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.980e-10
Identity = 32/72 (44.44%), Postives = 46/72 (63.89%), Query Frame = 0 
Query:   62 LPDEVTPLLFSYMEAPALCRAAAVSRSWAKFAEAD-AHWDSLCRARWGLAPNSFTPPPDPIKLLYRLHHSSL 132
            LP +    +  ++ AP+L  +  V R W + A  D AHW  LC+  +GL+P +F+PPPDP+KLLY L +SSL
Sbjct:  130 LPQDTIKQILRFLPAPSLLVSEMVCRLWRELASTDDAHWKDLCKRTYGLSPENFSPPPDPVKLLYMLTYSSL 201
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A4D9CPF7_9STRA1.980e-1044.44F-box domain-containing protein n=2 Tax=Monodopsid... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1280.50coord: 45..145
e-value: 1.9E-10
score: 42.5
IPR001810F-box domainPFAMPF12937F-box-likecoord: 61..104
e-value: 1.3E-8
score: 34.6
IPR001810F-box domainPROSITEPS50181FBOXcoord: 56..102
score: 9.25902
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 56..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15contigP-wetherbeei_contig15:3419..4391 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15.1.2mRNA_P-wetherbeei_contig15.1.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig15 3378..4793 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig15.1.2 ID=prot_P-wetherbeei_contig15.1.2|Name=mRNA_P-wetherbeei_contig15.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=169bp
MTPEDLSECRLIVPYRHGKHGRQLSAPRIQRKLICATDQNDTDFFVEIAT
EHHKNAPPRRHLPDEVTPLLFSYMEAPALCRAAAVSRSWAKFAEADAHWD
SLCRARWGLAPNSFTPPPDPIKLLYRLHHSSLKTMAVAEPRQSSCHLETH
GPGLPASRRMTRGQLHCK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
IPR036047F-box-like_dom_sf