mRNA_P-wetherbeei_contig14999.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14999.1.1 vs. uniprot
Match: L1JSM5_GUITC (PCIF1_WW domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JSM5_GUITC) HSP 1 Score: 110 bits (274), Expect = 3.400e-23 Identity = 59/163 (36.20%), Postives = 89/163 (54.60%), Query Frame = 2
Query: 347 TPTKVSHSKFCWHCESTGVRWLQVGVC*YLVLYFAFRFVWCAHRPSGSFQANPPFDYGTVAAMARHIDVLLSAATGPMSFAIVFPHWPDQACWRLVDGSRHKRHHLLLVRQCHGYLDGAQHARRKKSGTGTSFDSSLFFLQNSLGAQRWPVNAERCKRLQAAF 835
+P +S+FC T + +G +F F GSF+ANPPFD GT+ M H++ + S ++ P+SF I+ P+ PDQ WR V S +KR HL + + HGY +G+QH R + FD+S+ FLQN G+++WP E+ +L+ AF
Sbjct: 314 SPMNCRYSRFCSAHFDTDYIFGSIGS------FFQF------FPREGSFEANPPFDDGTILKMIDHMEDIFSKSSLPLSFIIIIPYLPDQNGWRRVYSSEYKRAHLKVKQAEHGYFEGSQHDRINRYRI-APFDTSVIFLQNEAGSEKWPATKEKLLKLRNAF 463
BLAST of mRNA_P-wetherbeei_contig14999.1.1 vs. uniprot
Match: A0A6A3R028_9STRA (PCIF1_WW domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3R028_9STRA) HSP 1 Score: 109 bits (272), Expect = 4.730e-23 Identity = 58/163 (35.58%), Postives = 89/163 (54.60%), Query Frame = 2
Query: 347 TPTKVSHSKFCWHCESTGVRWLQVGVC*YLVLYFAFRFVWCAHRPSGSFQANPPFDYGTVAAMARHIDVLLSAATGPMSFAIVFPHWPDQACWRLVDGSRHKRHHLLLVRQCHGYLDGAQHARRKKSGTGTSFDSSLFFLQNSLGAQRWPVNAERCKRLQAAF 835
+P +S+FC T + VG +F F SG F+ANPPF + MA H+ LL+AA GP++F ++ P W D W+ ++ SR+ + HLL+ ++ HGY +G Q R+ + SFD+S+FF QNS +WPV E+ + L++AF
Sbjct: 293 SPLNCRYSRFCSAFLDTDFAFGSVGS------FFDFS------PRSGCFEANPPFIPKVIKRMADHMTALLNAADGPLAFIVIIPAWQDTEGWQQLNASRYNQTHLLVPQKQHGYCEGKQQIRKTRWRI-ASFDTSVFFWQNSKACNKWPVTEEKLESLKSAF 442
BLAST of mRNA_P-wetherbeei_contig14999.1.1 vs. uniprot
Match: G4YF15_PHYSP (PCIF1_WW domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=G4YF15_PHYSP) HSP 1 Score: 107 bits (267), Expect = 8.520e-23 Identity = 57/163 (34.97%), Postives = 88/163 (53.99%), Query Frame = 2
Query: 347 TPTKVSHSKFCWHCESTGVRWLQVGVC*YLVLYFAFRFVWCAHRPSGSFQANPPFDYGTVAAMARHIDVLLSAATGPMSFAIVFPHWPDQACWRLVDGSRHKRHHLLLVRQCHGYLDGAQHARRKKSGTGTSFDSSLFFLQNSLGAQRWPVNAERCKRLQAAF 835
+P +S+FC T + VG +F F SG F+ANPPF + MA H+ LL+AA GP++F ++ P W D W+ ++ SR+ + HLL+ ++ HGY +G Q R+ + SFD+S+FF QNS +WPV ++ L++AF
Sbjct: 205 SPLNCRYSRFCSAFLDTDCAFGSVGS------FFDFS------PRSGCFEANPPFIPKVIKRMADHMTALLNAADGPLAFIVIIPAWQDTEGWQQLNSSRYNQTHLLIPQKQHGYCEGKQQIRKTRWRI-ASFDTSVFFWQNSKACNKWPVTEKKLDSLKSAF 354
BLAST of mRNA_P-wetherbeei_contig14999.1.1 vs. uniprot
Match: A0A6A4A4B0_9STRA (PCIF1_WW domain-containing protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A4A4B0_9STRA) HSP 1 Score: 109 bits (272), Expect = 8.910e-23 Identity = 58/163 (35.58%), Postives = 89/163 (54.60%), Query Frame = 2
Query: 347 TPTKVSHSKFCWHCESTGVRWLQVGVC*YLVLYFAFRFVWCAHRPSGSFQANPPFDYGTVAAMARHIDVLLSAATGPMSFAIVFPHWPDQACWRLVDGSRHKRHHLLLVRQCHGYLDGAQHARRKKSGTGTSFDSSLFFLQNSLGAQRWPVNAERCKRLQAAF 835
+P +S+FC T + VG +F F SG F+ANPPF + MA H+ LL+AA GP++F ++ P W D W+ ++ SR+ + HLL+ ++ HGY +G Q R+ + SFD+S+FF QNS +WPV E+ + L++AF
Sbjct: 293 SPLNCRYSRFCSAFLDTDFAFGSVGS------FFDFS------PRSGCFEANPPFIPKVIKRMADHMTALLNAADGPLAFIVIIPAWQDTEGWQQLNASRYNQTHLLVPQKQHGYCEGKQQIRKTRWRI-ASFDTSVFFWQNSKACNKWPVTEEKLESLKSAF 442
BLAST of mRNA_P-wetherbeei_contig14999.1.1 vs. uniprot
Match: D0NY28_PHYIT (PCIF1_WW domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NY28_PHYIT) HSP 1 Score: 105 bits (261), Expect = 3.610e-22 Identity = 56/163 (34.36%), Postives = 87/163 (53.37%), Query Frame = 2
Query: 347 TPTKVSHSKFCWHCESTGVRWLQVGVC*YLVLYFAFRFVWCAHRPSGSFQANPPFDYGTVAAMARHIDVLLSAATGPMSFAIVFPHWPDQACWRLVDGSRHKRHHLLLVRQCHGYLDGAQHARRKKSGTGTSFDSSLFFLQNSLGAQRWPVNAERCKRLQAAF 835
+P +S+FC T + VG +F F SG F+ANPPF + MA H+ LL+AA GP++F ++ P W + W+ ++ SR + HLL+ ++ HGY +G Q R+ + SFD+S+FF QNS +WPV ++ + L+ AF
Sbjct: 170 SPLNCRYSRFCSAFLDTDFAFGSVGS------FFDFS------PRSGCFEANPPFIPKVIKRMADHMTALLNAADGPLAFIVIIPAWQETEGWQQLNASRFNQRHLLIPQKQHGYCEGKQQIRKTRWRI-ASFDTSVFFWQNSKACNKWPVTEKKLEGLKQAF 319
BLAST of mRNA_P-wetherbeei_contig14999.1.1 vs. uniprot
Match: A0A329T4D0_9STRA (PCIF1_WW domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329T4D0_9STRA) HSP 1 Score: 106 bits (264), Expect = 5.650e-22 Identity = 57/163 (34.97%), Postives = 87/163 (53.37%), Query Frame = 2
Query: 347 TPTKVSHSKFCWHCESTGVRWLQVGVC*YLVLYFAFRFVWCAHRPSGSFQANPPFDYGTVAAMARHIDVLLSAATGPMSFAIVFPHWPDQACWRLVDGSRHKRHHLLLVRQCHGYLDGAQHARRKKSGTGTSFDSSLFFLQNSLGAQRWPVNAERCKRLQAAF 835
+P +S+FC T + VG +F F SG F+ANPPF + MA H+ LL+AA GP++F ++ P W + W+ ++ SR + HLL+ ++ HGY +G Q R+ + SFD+SLFF QNS +WPV ++ + L+ AF
Sbjct: 302 SPLNCRYSRFCSAFLDTDFAFGSVGS------FFDFS------PRSGCFEANPPFIPKVIKRMADHMTALLNAADGPLAFIVIIPAWQETEGWQQLNASRFNQRHLLVPQKQHGYCEGKQQIRKTRWRI-ASFDTSLFFWQNSKACNKWPVTEKKLESLKQAF 451
BLAST of mRNA_P-wetherbeei_contig14999.1.1 vs. uniprot
Match: A0A0P1A8A2_PLAHL (Phosphorylated CTD interacting factor 1, WW domain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A8A2_PLAHL) HSP 1 Score: 105 bits (263), Expect = 7.350e-22 Identity = 56/163 (34.36%), Postives = 88/163 (53.99%), Query Frame = 2
Query: 347 TPTKVSHSKFCWHCESTGVRWLQVGVC*YLVLYFAFRFVWCAHRPSGSFQANPPFDYGTVAAMARHIDVLLSAATGPMSFAIVFPHWPDQACWRLVDGSRHKRHHLLLVRQCHGYLDGAQHARRKKSGTGTSFDSSLFFLQNSLGAQRWPVNAERCKRLQAAF 835
+P +S+FC T + VG +F F SG F+ANPPF + MA H+ LL+AA GP++F ++ P W W+ ++ SR+ + H+L+ ++ HG+ +G Q R+ + SFD+S+FFLQNS +WPV ++ K L+ AF
Sbjct: 289 SPLNCRYSRFCSAFLDTDFAFGSVGS------FFDFS------PRSGCFEANPPFIPKVIKRMADHMAELLTAANGPLTFIVIIPSWQKTEGWQQLNASRYNQRHVLIPQKQHGFCEGKQQLRKTRWRI-ASFDTSIFFLQNSKACNQWPVTDQKLKLLKQAF 438
BLAST of mRNA_P-wetherbeei_contig14999.1.1 vs. uniprot
Match: A0A3M6VL48_9STRA (PCIF1_WW domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VL48_9STRA) HSP 1 Score: 103 bits (256), Expect = 5.960e-21 Identity = 56/163 (34.36%), Postives = 86/163 (52.76%), Query Frame = 2
Query: 347 TPTKVSHSKFCWHCESTGVRWLQVGVC*YLVLYFAFRFVWCAHRPSGSFQANPPFDYGTVAAMARHIDVLLSAATGPMSFAIVFPHWPDQACWRLVDGSRHKRHHLLLVRQCHGYLDGAQHARRKKSGTGTSFDSSLFFLQNSLGAQRWPVNAERCKRLQAAF 835
+P +S+FC T + VG +F F SG F+ANPPF + MA H+ LL+AA GP++F I+ P W W+ ++ SR + HLL+ ++ HGY +G Q R+ + SFD+S+FF QN++ WPV ++ + L+ AF
Sbjct: 282 SPLNCRYSRFCSAFLDTDFVFGSVGS------FFDFS------PRSGCFEANPPFIPKVIKRMADHMTALLTAADGPLAFIIIIPTWQKTEGWQQLNASRFNQRHLLIPQKQHGYCEGKQQIRKTRWRI-ASFDTSVFFWQNAMACNEWPVTEKKLESLKHAF 431
BLAST of mRNA_P-wetherbeei_contig14999.1.1 vs. uniprot
Match: H3HC97_PHYRM (SMC hinge domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HC97_PHYRM) HSP 1 Score: 102 bits (254), Expect = 2.900e-20 Identity = 58/169 (34.32%), Postives = 89/169 (52.66%), Query Frame = 2
Query: 347 TPTKVSHSKFCWHCESTGVRWLQVGVC*YLVLYFAFRFVWCAHRPSGSFQANPPFDYGTVAAMARHIDVLLSAATGPMSFAIVFPHWPDQAC------WRLVDGSRHKRHHLLLVRQCHGYLDGAQHARRKKSGTGTSFDSSLFFLQNSLGAQRWPVNAERCKRLQAAF 835
+P +S+FC T + VG +F F SGSF+ANPPF + MA H+ LL+AA GP++F ++ P W + W+ ++ SR + HLL+ ++ HGY +G Q R+ + SFD+S+FF QNS +WPV+ ++ + LQ AF
Sbjct: 1466 SPLNCRYSRFCSAFLDTDFAFGSVGS------FFDFS------PRSGSFEANPPFIPKVIKRMADHMTELLNAADGPLAFIVIIPAWHETEVLIIALGWQQLNSSRFNQRHLLIPQKQHGYCEGKQQIRKTRWRI-ASFDTSVFFWQNSKACSKWPVSEKKLESLQRAF 1621
BLAST of mRNA_P-wetherbeei_contig14999.1.1 vs. uniprot
Match: A0A7S0CUG5_MICPS (Hypothetical protein (Fragment) n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0CUG5_MICPS) HSP 1 Score: 96.7 bits (239), Expect = 1.750e-18 Identity = 49/124 (39.52%), Postives = 70/124 (56.45%), Query Frame = 2
Query: 470 AHRPS-GSFQANPPFDYGTVAAMARHIDVLLSAATGPMSFAIVFPHWPDQACWRLVDGSRHKRHHLL-LVRQCHGYLDGAQHARRKKSGTGTSFDSSLFFLQNSLGAQRWPVNAERCKRLQAAF 835
A +P GSFQANPPFD + + + + LL P+SF ++ P+WP +ACW+ + S KR LL L + HGY+ G+ A R K T SF + + FLQN GA +WPV + ++ F
Sbjct: 377 AFKPKRGSFQANPPFDSAFIGRLVKRFETLLRDTNEPLSFVLIVPYWPTEACWKNLTSSPFKRKPLLRLKKNKHGYVAGSS-ATRVKRTTPASFTTDVVFLQNEAGAFKWPVTDTTLRLIKIGF 499 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14999.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14999.1.1 >prot_P-wetherbeei_contig14999.1.1 ID=prot_P-wetherbeei_contig14999.1.1|Name=mRNA_P-wetherbeei_contig14999.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=61bp MGPSNRDRPFQLECFASPLNCRYSSFCSAFKDVDSRFGSIGSFFEFHPNEback to top mRNA from alignment at P-wetherbeei_contig14999:2..1183+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14999.1.1 ID=mRNA_P-wetherbeei_contig14999.1.1|Name=mRNA_P-wetherbeei_contig14999.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1182bp|location=Sequence derived from alignment at P-wetherbeei_contig14999:2..1183+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14999:2..1183+ >mRNA_P-wetherbeei_contig14999.1.1 ID=mRNA_P-wetherbeei_contig14999.1.1|Name=mRNA_P-wetherbeei_contig14999.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=183bp|location=Sequence derived from alignment at P-wetherbeei_contig14999:2..1183+ (Phaeothamnion wetherbeei SAG_119_79)back to top |