mRNA_P-wetherbeei_contig14996.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14996.1.1
Unique NamemRNA_P-wetherbeei_contig14996.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig14996.1.1 vs. uniprot
Match: A0A1F4F6Y7_9PROT (ABM domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 TaxID=1797505 RepID=A0A1F4F6Y7_9PROT)

HSP 1 Score: 110 bits (275), Expect = 1.030e-29
Identity = 61/91 (67.03%), Postives = 68/91 (74.73%), Query Frame = 1 
Query:    1 LVVTIRIKPANVDAFMGMLAANAAAARK-EPGCLTFDVLVDPQDKTRVMLYEVYASEAAFQEHQAQEAFKVYLAEAVPLLAEREREFRTRV 270
            L V +RIKP NVDAFMGML  NA  AR+ EPGC  FDVLVDP D+T+VMLYEVYA + AF+ HQ    FK YLAEAVPLLA RER+   RV
Sbjct:    5 LAVQLRIKPENVDAFMGMLLENAQHARETEPGCKQFDVLVDPADRTKVMLYEVYADDKAFEAHQQTPHFKKYLAEAVPLLAARERQIWKRV 95
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BLAST of mRNA_P-wetherbeei_contig14996.1.1 vs. uniprot
Match: A0A536WPZ5_9PROT (Antibiotic biosynthesis monooxygenase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536WPZ5_9PROT)

HSP 1 Score: 108 bits (269), Expect = 8.440e-29
Identity = 57/91 (62.64%), Postives = 64/91 (70.33%), Query Frame = 1 
Query:    1 LVVTIRIKPANVDAFMGMLAANAAAARKEPGCLTFDVLVDPQDKTRVMLYEVYASEAAFQEHQAQEAFKVYLAEAVPLLAEREREFRTRVS 273
            LVV +RIKP NV+ FM M+ ANA  AR EPGC  FDVLVDPQ+KT+ MLYEVY  E AF+ HQ    FK YLAEAVPLL  RER    R +
Sbjct:    4 LVVNLRIKPENVERFMAMVLANAREARNEPGCRQFDVLVDPQEKTKAMLYEVYNDEKAFEAHQQTPHFKKYLAEAVPLLVSRERHVYRRAA 94
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BLAST of mRNA_P-wetherbeei_contig14996.1.1 vs. uniprot
Match: A0A536T0V9_9PROT (Antibiotic biosynthesis monooxygenase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536T0V9_9PROT)

HSP 1 Score: 107 bits (268), Expect = 1.160e-28
Identity = 58/91 (63.74%), Postives = 65/91 (71.43%), Query Frame = 1 
Query:    1 LVVTIRIKPANVDAFMGMLAANAAAARKEPGCLTFDVLVDPQDKTRVMLYEVYASEAAFQEHQAQEAFKVYLAEAVPLLAEREREFRTRVS 273
            LVV I+IKP NV+ +M M   NA  ARKEPGC  FDVLVDP+DKT VMLYE+Y  E AF+ HQ    FK YLAEAVPLLA RER   TR +
Sbjct:    4 LVVNIKIKPENVERWMKMALENAREARKEPGCRHFDVLVDPKDKTSVMLYEIYNDEPAFEAHQQTPHFKKYLAEAVPLLASRERHVYTRAN 94
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BLAST of mRNA_P-wetherbeei_contig14996.1.1 vs. uniprot
Match: A0A537A787_9PROT (Antibiotic biosynthesis monooxygenase n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537A787_9PROT)

HSP 1 Score: 105 bits (262), Expect = 9.820e-28
Identity = 55/89 (61.80%), Postives = 64/89 (71.91%), Query Frame = 1 
Query:    7 VTIRIKPANVDAFMGMLAANAAAARKEPGCLTFDVLVDPQDKTRVMLYEVYASEAAFQEHQAQEAFKVYLAEAVPLLAEREREFRTRVS 273
            V +RIKP NV++FM     NAA +RKEPGC  FDVLVDP++ TRVMLYEVY  + AF+ HQ    FK YLAEAVPLLA RER   TR +
Sbjct:    6 VELRIKPENVESFMASALENAAQSRKEPGCRQFDVLVDPKEPTRVMLYEVYLDDKAFEAHQQTAHFKKYLAEAVPLLASRERHVWTRAA 94
[Close]
BLAST of mRNA_P-wetherbeei_contig14996.1.1 vs. uniprot
Match: A0A521W812_9PROT (Antibiotic biosynthesis monooxygenase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521W812_9PROT)

HSP 1 Score: 105 bits (263), Expect = 1.590e-27
Identity = 53/89 (59.55%), Postives = 67/89 (75.28%), Query Frame = 1 
Query:    1 LVVTIRIKPANVDAFMGMLAANAAAARKEPGCLTFDVLVDPQDKTRVMLYEVYASEAAFQEHQAQEAFKVYLAEAVPLLAEREREFRTR 267
            L+V IR+ P NV+AF+  LA NA  ARKEPGC  F+VLVDP+D+T+++L+EVY  E AF+ HQ    F+ YLAEAVPLLA RER+  TR
Sbjct:   34 LIVNIRVTPENVEAFLQKLADNAREARKEPGCRQFEVLVDPKDRTKIVLFEVYEDERAFESHQQTPHFRKYLAEAVPLLASRERQVMTR 122
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BLAST of mRNA_P-wetherbeei_contig14996.1.1 vs. uniprot
Match: A0A1F3YKN5_9PROT (ABM domain-containing protein n=1 Tax=Betaproteobacteria bacterium RBG_16_66_20 TaxID=1797479 RepID=A0A1F3YKN5_9PROT)

HSP 1 Score: 102 bits (255), Expect = 1.140e-26
Identity = 55/84 (65.48%), Postives = 60/84 (71.43%), Query Frame = 1 
Query:    7 VTIRIKPANVDAFMGMLAANAAAARKEPGCLTFDVLVDPQDKTRVMLYEVYASEAAFQEHQAQEAFKVYLAEAVPLLAEREREF 258
            V IRIKP NV +FM  +  NA AAR EPGC  F+VLV P DKT VMLYEVY  + AF  HQA  AFK Y+AEAVPLLA RER F
Sbjct:    7 VNIRIKPENVASFMQKVIENAKAARSEPGCRQFEVLVSPDDKTSVMLYEVYNDQKAFDAHQAGAAFKKYVAEAVPLLASRERHF 90
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BLAST of mRNA_P-wetherbeei_contig14996.1.1 vs. uniprot
Match: A0A536W8D2_9PROT (Antibiotic biosynthesis monooxygenase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536W8D2_9PROT)

HSP 1 Score: 100 bits (249), Expect = 9.340e-26
Identity = 53/89 (59.55%), Postives = 62/89 (69.66%), Query Frame = 1 
Query:    7 VTIRIKPANVDAFMGMLAANAAAARKEPGCLTFDVLVDPQDKTRVMLYEVYASEAAFQEHQAQEAFKVYLAEAVPLLAEREREFRTRVS 273
            V +RIKP NV++F+     NAA +RKEPGC  FDVLVDP+D++R MLYEVYA E AF  HQ    FK YLAEAVPLLA R R    R +
Sbjct:    6 VDLRIKPENVESFLAGALENAAHSRKEPGCRQFDVLVDPEDRSRAMLYEVYADEKAFSAHQQTAHFKKYLAEAVPLLASRMRHVWKRAA 94
[Close]
BLAST of mRNA_P-wetherbeei_contig14996.1.1 vs. uniprot
Match: A0A537DKP2_9PROT (Antibiotic biosynthesis monooxygenase n=4 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537DKP2_9PROT)

HSP 1 Score: 100 bits (248), Expect = 1.330e-25
Identity = 53/82 (64.63%), Postives = 59/82 (71.95%), Query Frame = 1 
Query:    7 VTIRIKPANVDAFMGMLAANAAAARKEPGCLTFDVLVDPQDKTRVMLYEVYASEAAFQEHQAQEAFKVYLAEAVPLLAERER 252
            V +RIKP NVD FM  +  NA  ARKE GC  FDVLVDP D+ +VMLYEVYA E AF+ HQ    FK YLAEAVPLLA R+R
Sbjct:    7 VQLRIKPENVDRFMKQVLENAQHARKEAGCRQFDVLVDPHDRAQVMLYEVYADEQAFEAHQQTVHFKKYLAEAVPLLASRQR 88
[Close]
BLAST of mRNA_P-wetherbeei_contig14996.1.1 vs. uniprot
Match: A0A537AR54_9PROT (Antibiotic biosynthesis monooxygenase n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537AR54_9PROT)

HSP 1 Score: 99.4 bits (246), Expect = 2.670e-25
Identity = 51/89 (57.30%), Postives = 62/89 (69.66%), Query Frame = 1 
Query:    7 VTIRIKPANVDAFMGMLAANAAAARKEPGCLTFDVLVDPQDKTRVMLYEVYASEAAFQEHQAQEAFKVYLAEAVPLLAEREREFRTRVS 273
            V +RIKP NV++F+     N+A +RKEPGC  FDVLVDP+D+T+VMLYE Y  + AF  HQ    FK YLAEAVPLLA RER    R +
Sbjct:    6 VDLRIKPENVESFIARAIENSADSRKEPGCRQFDVLVDPKDRTKVMLYEAYLDDKAFDAHQQTAHFKKYLAEAVPLLASRERHVWKRAA 94
[Close]
BLAST of mRNA_P-wetherbeei_contig14996.1.1 vs. uniprot
Match: A0A537ARI1_9PROT (Antibiotic biosynthesis monooxygenase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537ARI1_9PROT)

HSP 1 Score: 99.8 bits (247), Expect = 5.040e-25
Identity = 51/89 (57.30%), Postives = 62/89 (69.66%), Query Frame = 1 
Query:    7 VTIRIKPANVDAFMGMLAANAAAARKEPGCLTFDVLVDPQDKTRVMLYEVYASEAAFQEHQAQEAFKVYLAEAVPLLAEREREFRTRVS 273
            V +RIKP +V++F+     NAA +RKEPGC  FDVLVDP+D+T+ MLYEVYA E AF  HQ    FK Y+AEAVPLLA R R    R +
Sbjct:   41 VDLRIKPESVESFIAKAIENAAGSRKEPGCRQFDVLVDPEDRTQAMLYEVYADEKAFDAHQQTAHFKKYIAEAVPLLASRRRHVWKRAA 129
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14996.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1F4F6Y7_9PROT1.030e-2967.03ABM domain-containing protein n=1 Tax=Betaproteoba... [more]
A0A536WPZ5_9PROT8.440e-2962.64Antibiotic biosynthesis monooxygenase n=1 Tax=Beta... [more]
A0A536T0V9_9PROT1.160e-2863.74Antibiotic biosynthesis monooxygenase n=1 Tax=Beta... [more]
A0A537A787_9PROT9.820e-2861.80Antibiotic biosynthesis monooxygenase n=2 Tax=Beta... [more]
A0A521W812_9PROT1.590e-2759.55Antibiotic biosynthesis monooxygenase n=1 Tax=Beta... [more]
A0A1F3YKN5_9PROT1.140e-2665.48ABM domain-containing protein n=1 Tax=Betaproteoba... [more]
A0A536W8D2_9PROT9.340e-2659.55Antibiotic biosynthesis monooxygenase n=1 Tax=Beta... [more]
A0A537DKP2_9PROT1.330e-2564.63Antibiotic biosynthesis monooxygenase n=4 Tax=Beta... [more]
A0A537AR54_9PROT2.670e-2557.30Antibiotic biosynthesis monooxygenase n=2 Tax=Beta... [more]
A0A537ARI1_9PROT5.040e-2557.30Antibiotic biosynthesis monooxygenase n=1 Tax=Beta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14996contigP-wetherbeei_contig14996:3..281 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog399739.Pmen_1703
PFAMsABM
Model size279
Max annot lvl1236|Gammaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.4e-13
EggNOG OGsCOG1359@1|root,COG1359@2|Bacteria,1N98F@1224|Proteobacteria,1T0MG@1236|Gammaproteobacteria,1YKXS@136841|Pseudomonas aeruginosa group
DescriptionAntibiotic biosynthesis monooxygenase
Cds size279
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186039.526953-CDS-P-wetherbeei_contig14996:2..2811683186039.526953-CDS-P-wetherbeei_contig14996:2..281Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14996 3..281 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14996.1.1prot_P-wetherbeei_contig14996.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14996 3..281 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14996.1.1

>prot_P-wetherbeei_contig14996.1.1 ID=prot_P-wetherbeei_contig14996.1.1|Name=mRNA_P-wetherbeei_contig14996.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=93bp
LVVTIRIKPANVDAFMGMLAANAAAARKEPGCLTFDVLVDPQDKTRVMLY
EVYASEAAFQEHQAQEAFKVYLAEAVPLLAEREREFRTRVSH*
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mRNA from alignment at P-wetherbeei_contig14996:3..281+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14996.1.1 ID=mRNA_P-wetherbeei_contig14996.1.1|Name=mRNA_P-wetherbeei_contig14996.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=279bp|location=Sequence derived from alignment at P-wetherbeei_contig14996:3..281+ (Phaeothamnion wetherbeei SAG_119_79)
CTGGTCGTCACCATCCGCATCAAGCCCGCGAACGTCGACGCCTTCATGGG
CATGCTCGCCGCCAACGCGGCGGCCGCGAGGAAGGAACCGGGCTGCCTCA
CCTTCGACGTCCTCGTCGACCCCCAGGACAAGACCCGCGTGATGCTTTAC
GAGGTCTACGCCAGCGAAGCCGCATTCCAGGAGCACCAGGCGCAGGAGGC
CTTCAAGGTCTACCTCGCCGAGGCGGTGCCGCTGCTCGCCGAGCGCGAGC
GGGAGTTCAGGACCCGCGTCTCGCACTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14996:3..281+

>mRNA_P-wetherbeei_contig14996.1.1 ID=mRNA_P-wetherbeei_contig14996.1.1|Name=mRNA_P-wetherbeei_contig14996.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=279bp|location=Sequence derived from alignment at P-wetherbeei_contig14996:3..281+ (Phaeothamnion wetherbeei SAG_119_79)
CTGGTCGTCACCATCCGCATCAAGCCCGCGAACGTCGACGCCTTCATGGG
CATGCTCGCCGCCAACGCGGCGGCCGCGAGGAAGGAACCGGGCTGCCTCA
CCTTCGACGTCCTCGTCGACCCCCAGGACAAGACCCGCGTGATGCTTTAC
GAGGTCTACGCCAGCGAAGCCGCATTCCAGGAGCACCAGGCGCAGGAGGC
CTTCAAGGTCTACCTCGCCGAGGCGGTGCCGCTGCTCGCCGAGCGCGAGC
GGGAGTTCAGGACCCGCGTCTCGCACTAA
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