mRNA_P-wetherbeei_contig14957.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14957.1.1
Unique NamemRNA_P-wetherbeei_contig14957.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14957.1.1 vs. uniprot
Match: A0A3D5DG28_9GAMM (PQQ-dependent catabolism-associated beta-propeller protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DG28_9GAMM)

HSP 1 Score: 242 bits (617), Expect = 5.220e-75
Identity = 129/247 (52.23%), Postives = 158/247 (63.97%), Query Frame = 1
Query:   61 RVFVTNEKGDSVSVIDAKTNQVIKTIAIGKRPRGVGMAPDGSAVYVAVSGANHIAVIDPVSLELKGQFASGNDPEAFAVHSNGNIYISNEEDAKASXXXXXXXXXXXXXXXXXXXXXXXXXXXGTRAIVTSESTNMLHIIAIPEHTVVNNIXXXXXXXXXXXXXXXXXXXXXXXXXGEVKKVDVASGTILGRMTLSDDQAKPKDIMVSRDGKRLYVAGGRANRVFVLDSNSLEVITSVPVGKRVWGL 801
            R+FVTNEK +SVSVID KTN VI TIAIG RPRG+G+APD S VYVA+S                 +F  G+DPEAFAVH NGNIYISNE+DAKA+                           GTR IVTSESTNMLH+IA+PEH ++NNI                         GEVKKVD++SGTI GRM L+DD+AKPKD++++ D  +L+VAGGRAN +FVLD+++LE+  S+PVGKRVWGL
Sbjct:   30 RIFVTNEKDNSVSVIDGKTNVVIATIAIGNRPRGIGIAPDLSEVYVAISXXXXXXXXXXXXXXXXRKFDGGHDPEAFAVHPNGNIYISNEDDAKATVLNPENGSKVDEIKVGMEPEGVAVSADGTRVIVTSESTNMLHVIAVPEHKIINNILVGARPRAATFNRAGTIAYATSEISGEVKKVDLSSGTITGRMPLADDRAKPKDVLLNVDESKLFVAGGRANCIFVLDAHTLEIQQSIPVGKRVWGL 276          
BLAST of mRNA_P-wetherbeei_contig14957.1.1 vs. uniprot
Match: A0A2G2IF17_COLSX (PQQ-dependent catabolism-associated beta-propeller protein n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2G2IF17_COLSX)

HSP 1 Score: 229 bits (585), Expect = 2.930e-70
Identity = 148/249 (59.44%), Postives = 183/249 (73.49%), Query Frame = 1
Query:   55 SGRVFVTNEKGDSVSVIDAKTNQVIKTIAIGKRPRGVGMAPDGSAVYVAVSGANHIAVIDPVSLELKGQFASGNDPEAFAVHSNGNIYISNEEDAKASXXXXXXXXXXXXXXXXXXXXXXXXXXXGTRAIVTSESTNMLHIIAIPEHTVVNNIXXXXXXXXXXXXXXXXXXXXXXXXXGEVKKVDVASGTILGRMTLSDDQAKPKDIMVSRDGKRLYVAGGRANRVFVLDSNSLEVITSVPVGKRVWGL 801
            +GRVFVTNE+ ++VSVI+  T+Q+  TI IG+RPRG+G++PDGS VYVA+S  + IAV DP SL++   F +G DPEAFAVH NGNIYISNE+ AKA+                           G R I+TSESTNMLH+IA+PEH      XXXXXXXXXXXXXXXXXXXXXXXXX  V KV++A+G I+ R++L DD+AKPKDI++S+DGK LYVAGGR N+V VLDS+SL +I  +PVGKRVWGL
Sbjct:   23 TGRVFVTNERSNTVSVINGTTHQLEATIEIGERPRGIGISPDGSEVYVAISKEDKIAVFDPKSLKILRTFHAGEDPEAFAVHPNGNIYISNEDSAKATVINPNNGEVIAEIPVGIEPEGVAISSDGKRVIITSESTNMLHVIAVPEHKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVIKVEMATGKIVQRISLGDDKAKPKDILLSKDGKSLYVAGGRLNQVMVLDSDSLTLIKGIPVGKRVWGL 271          
BLAST of mRNA_P-wetherbeei_contig14957.1.1 vs. uniprot
Match: A0A661BVN0_9GAMM (PQQ-dependent catabolism-associated beta-propeller protein n=3 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661BVN0_9GAMM)

HSP 1 Score: 226 bits (576), Expect = 6.810e-69
Identity = 143/249 (57.43%), Postives = 188/249 (75.50%), Query Frame = 1
Query:   55 SGRVFVTNEKGDSVSVIDAKTNQVIKTIAIGKRPRGVGMAPDGSAVYVAVSGANHIAVIDPVSLELKGQFASGNDPEAFAVHSNGNIYISNEEDAKASXXXXXXXXXXXXXXXXXXXXXXXXXXXGTRAIVTSESTNMLHIIAIPEHTVVNNIXXXXXXXXXXXXXXXXXXXXXXXXXGEVKKVDVASGTILGRMTLSDDQAKPKDIMVSRDGKRLYVAGGRANRVFVLDSNSLEVITSVPVGKRVWGL 801
            +GR+F+TNEKG++VSVI+ +T +V   IAIG+RPRG+G++PDG+ VYVAVS  N IAV DP +L++  +F SG+DPE FAVH NGNIYISNE+DAKA XXXXXXXXXXXXXXXXXXXXXXXXXXX ++ IVTSESTNMLH+I +P +T+ +NI                         GE+ K+D+ +  IL R  L D ++KPKD+++S+D K +YVAGGR+N V+++D+++LEVI  +PVGKRVWGL
Sbjct:   24 TGRIFITNEKGNTVSVINGETLEVESEIAIGERPRGIGISPDGTEVYVAVSEENLIAVFDPKTLKVLRKFESGSDPETFAVHPNGNIYISNEDDAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKVIVTSESTNMLHVITVPGNTITDNILVGSRPRAAVFTNNSKIAYATAEITGEIVKIDMENAKILKRSQLEDPKSKPKDVILSKDEKHIYVAGGRSNSVWLMDADTLEVIKGIPVGKRVWGL 272          
BLAST of mRNA_P-wetherbeei_contig14957.1.1 vs. uniprot
Match: A0A2E2BC08_9GAMM (PQQ-dependent catabolism-associated beta-propeller protein n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2E2BC08_9GAMM)

HSP 1 Score: 219 bits (559), Expect = 2.660e-66
Identity = 169/249 (67.87%), Postives = 200/249 (80.32%), Query Frame = 1
Query:   55 SGRVFVTNEKGDSVSVIDAKTNQVIKTIAIGKRPRGVGMAPDGSAVYVAVSGANHIAVIDPVSLELKGQFASGNDPEAFAVHSNGNIYISNEEDAKASXXXXXXXXXXXXXXXXXXXXXXXXXXXGTRAIVTSESTNMLHIIAIPEHTVVNNIXXXXXXXXXXXXXXXXXXXXXXXXXGEVKKVDVASGTILGRMTLSDDQAKPKDIMVSRDGKRLYVAGGRANRVFVLDSNSLEVITSVPVGKRVWGL 801
            +GRVFV+NE+GDSVSV D  TNQVI TI +GKRPRGVG++PDG+ VYVAVS  N IAV+DPV LE+   F+ G+DPEAFAVH NGNIYISNE      XXXXXXXXXXXXXXXXXXXXXXXXXXXGT+  VTSESTN+LHII IP H ++   XXXXXXXXXXXXXXXXXXXXXXXXX            I  +++L D +AKPKD++VS+DG++LYVAGGR+N++FVLD   L+++ S+PVGKRVWGL
Sbjct:   27 TGRVFVSNERGDSVSVFDGNTNQVISTIPVGKRPRGVGISPDGTEVYVAVSIDNLIAVVDPVKLEVXRTFSCGDDPEAFAVHPNGNIYISNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTKVAVTSESTNLLHIIGIPSHDILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQQKVSLGDARAKPKDVLVSKDGQKLYVAGGRSNKIFVLDEKELKILNSIPVGKRVWGL 275          
BLAST of mRNA_P-wetherbeei_contig14957.1.1 vs. uniprot
Match: A0A523P5J0_9PROT (PQQ-dependent catabolism-associated beta-propeller protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523P5J0_9PROT)

HSP 1 Score: 213 bits (541), Expect = 2.240e-63
Identity = 165/247 (66.80%), Postives = 195/247 (78.95%), Query Frame = 1
Query:   61 RVFVTNEKGDSVSVIDAKTNQVIKTIAIGKRPRGVGMAPDGSAVYVAVSGANHIAVIDPVSLELKGQFASGNDPEAFAVHSNGNIYISNEEDAKASXXXXXXXXXXXXXXXXXXXXXXXXXXXGTRAIVTSESTNMLHIIAIPEHTVVNNIXXXXXXXXXXXXXXXXXXXXXXXXXGEVKKVDVASGTILGRMTLSDDQAKPKDIMVSRDGKRLYVAGGRANRVFVLDSNSLEVITSVPVGKRVWGL 801
            R+FVTNE+ D+VSVID  TNQVI TIAIG+RPRG+G+APDGS VYVA+S  N IAV DP S E+  +F SG+DPE FAVH NGN+Y          XXXXXXXXXXXXXXXXXXXXXXXXXX GT+ I+TSESTNMLH+I++PEH +    XXXXXXXXXXXXXXXXXXXXXXXXX             +G+M L+DD+AKPKDI++++D   L+VAGGRANRVFVLD+N+LE+  S+PVGKRVWGL
Sbjct:   30 RIFVTNERDDTVSVIDGSTNQVIATIAIGRRPRGIGIAPDGSEVYVAISDDNAIAVFDPESFEVLRRFDSGSDPETFAVHPNGNLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGTKVIITSESTNMLHVISVPEHKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGKMPLADDKAKPKDILLNKDETLLFVAGGRANRVFVLDANTLELYKSIPVGKRVWGL 276          
BLAST of mRNA_P-wetherbeei_contig14957.1.1 vs. uniprot
Match: A0A1G0K0X5_9GAMM (PQQ-dependent catabolism-associated beta-propeller protein n=1 Tax=Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_61_13 TaxID=1798300 RepID=A0A1G0K0X5_9GAMM)

HSP 1 Score: 207 bits (528), Expect = 1.060e-61
Identity = 163/263 (61.98%), Postives = 201/263 (76.43%), Query Frame = 1
Query:   13 LALLLACALDSVAASGRVFVTNEKGDSVSVIDAKTNQVIKTIAIGKRPRGVGMAPDGSAVYVAVSGANHIAVIDPVSLELKGQFASGNDPEAFAVHSNGNIYISNEEDAKASXXXXXXXXXXXXXXXXXXXXXXXXXXXGTRAIVTSESTNMLHIIAIPEHTVVNNIXXXXXXXXXXXXXXXXXXXXXXXXXGEVKKVDVASGTILGRMTLSDDQAKPKDIMVSRDGKRLYVAGGRANRVFVLDSNSLEVITSVPVGKRVWGL 801
            LAL+   AL     +GR+FVTNE  DSVSVI+ KT +V +T+ IGKRPRG+G++PDG  +YVA S  N I V+DP SL++   F +G+DPE FAVH NG+IY          XXXXXXXXXXXXXXXXXXXXXXXXXXX +R IVTSESTNMLH+I +PEH +V NI XXXXXXXXXXXXXXXXXXXXX   GEVKKVD+ +  I+    ++D++AKPKD+M+S D K LYVAGGR++ V VLD+ +L++  ++PVGKRVWGL
Sbjct:    9 LALMALPALSQATGTGRIFVTNEGSDSVSVINGKTLEVEQTLTIGKRPRGIGLSPDGRELYVAASEDNAIVVVDPGSLKVLRTFPAGSDPETFAVHPNGHIYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRVIVTSESTNMLHVIRVPEHDIVANILXXXXXXXXXXXXXXXXXXXXXEISGEVKKVDMRANKIIAVEKIADEKAKPKDVMLSADEKTLYVAGGRSDAVIVLDAATLKIKATIPVGKRVWGL 271          
BLAST of mRNA_P-wetherbeei_contig14957.1.1 vs. uniprot
Match: A0A836TZ31_9GAMM (PQQ-dependent catabolism-associated beta-propeller protein n=1 Tax=Thiotrichaceae bacterium TaxID=2030882 RepID=A0A836TZ31_9GAMM)

HSP 1 Score: 204 bits (520), Expect = 1.670e-60
Identity = 138/263 (52.47%), Postives = 182/263 (69.20%), Query Frame = 1
Query:   19 LLLACALDSVAA--SGRVFVTNEKGDSVSVIDAKTNQVIKTIAIGKRPRGVGMAPDGSAVYVAVSGANHIAVIDPVSLELKGQFASGNDPEAFAVHSNGNIYISNEEDAKASXXXXXXXXXXXXXXXXXXXXXXXXXXXGTRAIVTSESTNMLHIIAIPEHTVVNNIXXXXXXXXXXXXXXXXXXXXXXXXXGEVKKVDVASGTILGRMTLSDDQAKPKDIMVSRDGKRLYVAGGRANRVFVLDSNSLEVITSVPVGKRVWGL 801
            +LLA   +SV A  SGR+F+TNE+ DSVSVI+  T +V  TI IG+RPRG+G++PDG+ +Y+AVS  N I V+DPVSL++  +F +G+DPE FAVH NGNI           XXXXXXXXXXXXXXXXXXXXXXXXXXX  R I+TSESTNMLH+I +P +T+ NNI                         GEV KVD+ +  I+   +  D ++KPKD+++S+D K +YVAGGRAN++ V+D+++LE+I  +PVGKR WGL
Sbjct:    9 ILLAVLANSVLAAPSGRIFITNERSDSVSVINGSTLEVEATIEIGERPRGIGLSPDGAELYIAVSEENKIKVVDPVSLKIIREFEAGSDPETFAVHPNGNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRVIITSESTNMLHVITVPGNTIENNILIGSRPRAATFSQSGDIAYATAEISGEVVKVDMINAKIIKTGSTGDSKSKPKDVVLSKDEKVIYVAGGRANKIIVMDADTLEIIKGIPVGKRTWGL 271          
BLAST of mRNA_P-wetherbeei_contig14957.1.1 vs. uniprot
Match: A0A1Z8WTJ3_9GAMM (Uncharacterized protein n=1 Tax=Methylococcaceae bacterium TMED69 TaxID=1986766 RepID=A0A1Z8WTJ3_9GAMM)

HSP 1 Score: 197 bits (500), Expect = 1.790e-57
Identity = 156/246 (63.41%), Postives = 198/246 (80.49%), Query Frame = 1
Query:   64 VFVTNEKGDSVSVIDAKTNQVIKTIAIGKRPRGVGMAPDGSAVYVAVSGANHIAVIDPVSLELKGQFASGNDPEAFAVHSNGNIYISNEEDAKASXXXXXXXXXXXXXXXXXXXXXXXXXXXGTRAIVTSESTNMLHIIAIPEHTVVNNIXXXXXXXXXXXXXXXXXXXXXXXXXGEVKKVDVASGTILGRMTLSDDQAKPKDIMVSRDGKRLYVAGGRANRVFVLDSNSLEVITSVPVGKRVWGL 801
            V VTNEK DSVS+ID KT +++K I++G RPRG+G+APD S +Y+AVSG N I VI+P S ++   F SG+DPE+FAVH +G I+ISNEE A+ SXXXXXXXXXXXXXXXXXXXXXXXXXXXG+  +VTSES+NM H I+  ++      XXXXXXXXXXXXXXXXXXXXXXXXX E+ K+ V+ G ++ ++TLS D AKPKDI+++RDGK L+VAGGRAN ++V+DS ++ V  S+ VG+RVWGL
Sbjct:   28 VLVTNEKSDSVSIIDIKTLELVKEISVGDRPRGLGLAPDNSEIYIAVSGENKIKVIEPNSFQVTRSFYSGDDPESFAVHPSGLIFISNEEIAQTSXXXXXXXXXXXXXXXXXXXXXXXXXXXGSTIVVTSESSNMAHFISGSDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEISKIRVSDGAVVNKITLSKDMAKPKDILLARDGKTLFVAGGRANEIYVVDSINMNVEDSIQVGRRVWGL 273          
BLAST of mRNA_P-wetherbeei_contig14957.1.1 vs. uniprot
Match: A0A2E0PXZ1_9GAMM (PQQ-dependent catabolism-associated beta-propeller protein n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E0PXZ1_9GAMM)

HSP 1 Score: 196 bits (498), Expect = 3.270e-57
Identity = 131/249 (52.61%), Postives = 173/249 (69.48%), Query Frame = 1
Query:   55 SGRVFVTNEKGDSVSVIDAKTNQVIKTIAIGKRPRGVGMAPDGSAVYVAVSGANHIAVIDPVSLELKGQFASGNDPEAFAVHSNGNIYISNEEDAKASXXXXXXXXXXXXXXXXXXXXXXXXXXXGTRAIVTSESTNMLHIIAIPEHTVVNNIXXXXXXXXXXXXXXXXXXXXXXXXXGEVKKVDVASGTILGRMTLSDDQAKPKDIMVSRDGKRLYVAGGRANRVFVLDSNSLEVITSVPVGKRVWGL 801
            +GR+F+TNE+GD+VSVI+  +  V  TI +G RPRG+G++PDGS +Y+AVS  N I V+DPVSL++  +F +G+DPE FAVH NGN            XXXXXXXXXXXXXXXXXXXXXXXXXXXG R IVTSESTNMLH+I   ++T+  NI                         GEV K+D+ +G IL R +  D+++KPKD+++++D   +YVA GRAN+V  +D+ +LE+ITS+PVGKRVWGL
Sbjct:   23 TGRIFITNERGDTVSVINGDSLVVEATIDVGDRPRGIGISPDGSEIYIAVSEENKIKVMDPVSLKIIREFNAGSDPETFAVHPNGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKRVIVTSESTNMLHVIRASDNTIEKNILVGARPRAATFTKSGDIAYATAEISGEVVKIDMNTGEILKRGSSGDNKSKPKDVVLNKDESVVYVAAGRANKVVAMDAQTLEIITSIPVGKRVWGL 271          
BLAST of mRNA_P-wetherbeei_contig14957.1.1 vs. uniprot
Match: A0A2E0Q0C2_9GAMM (PQQ-dependent catabolism-associated beta-propeller protein n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E0Q0C2_9GAMM)

HSP 1 Score: 194 bits (494), Expect = 1.370e-56
Identity = 133/250 (53.20%), Postives = 170/250 (68.00%), Query Frame = 1
Query:   52 ASGRVFVTNEKGDSVSVIDAKTNQVIKTIAIGKRPRGVGMAPDGSAVYVAVSGANHIAVIDPVSLELKGQFASGNDPEAFAVHSNGNIYISNEEDAKASXXXXXXXXXXXXXXXXXXXXXXXXXXXGTRAIVTSESTNMLHIIAIPEHTVVNNIXXXXXXXXXXXXXXXXXXXXXXXXXGEVKKVDVASGTILGRMTLSDDQAKPKDIMVSRDGKRLYVAGGRANRVFVLDSNSLEVITSVPVGKRVWGL 801
            A  R+FVTNEK +++SVI+A+T  V  TI +G RPRG+G++PD S +YVAVS  N I VIDP SL++   F +G+DPE FAVH NGNI           XXXXXXXXXXXXXXXXXXXXXXXXXXX    IVTSESTNMLH+I  PE+ + +NI                         GEV KVD+ +  IL    L D++AKPKD+++S+D K +YVAGGRAN++ V++S++LE++  +PVGKRVWGL
Sbjct:   23 AKDRIFVTNEKSNNISVINAETLVVEDTIEVGDRPRGIGLSPDSSELYVAVSEENKIVVIDPNSLKILRDFEAGSDPETFAVHPNGNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVIVTSESTNMLHVIKAPENVIESNILIGSRPRAAVFTKSGDIAYATAEISGEVVKVDIPNAKILKTAPLGDNKAKPKDVILSKDEKTIYVAGGRANKIIVMNSDTLEILKGIPVGKRVWGL 272          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14957.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D5DG28_9GAMM5.220e-7552.23PQQ-dependent catabolism-associated beta-propeller... [more]
A0A2G2IF17_COLSX2.930e-7059.44PQQ-dependent catabolism-associated beta-propeller... [more]
A0A661BVN0_9GAMM6.810e-6957.43PQQ-dependent catabolism-associated beta-propeller... [more]
A0A2E2BC08_9GAMM2.660e-6667.87PQQ-dependent catabolism-associated beta-propeller... [more]
A0A523P5J0_9PROT2.240e-6366.80PQQ-dependent catabolism-associated beta-propeller... [more]
A0A1G0K0X5_9GAMM1.060e-6161.98PQQ-dependent catabolism-associated beta-propeller... [more]
A0A836TZ31_9GAMM1.670e-6052.47PQQ-dependent catabolism-associated beta-propeller... [more]
A0A1Z8WTJ3_9GAMM1.790e-5763.41Uncharacterized protein n=1 Tax=Methylococcaceae b... [more]
A0A2E0PXZ1_9GAMM3.270e-5752.61PQQ-dependent catabolism-associated beta-propeller... [more]
A0A2E0Q0C2_9GAMM1.370e-5653.20PQQ-dependent catabolism-associated beta-propeller... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14957contigP-wetherbeei_contig14957:3..944 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1286106.MPL1_06069
PFAMsCytochrom_D1,Lactonase
Model size942
Max annot lvl72273|Thiotrichales
Hectar predicted targeting categorysignal peptide
Exons1
Evalue6.25e-18
EggNOG OGsCOG3391@1|root,COG3391@2|Bacteria,1P862@1224|Proteobacteria,1RQZK@1236|Gammaproteobacteria,460F7@72273|Thiotrichales
DescriptionPQQ-dependent catabolism-associated beta-propeller protein
Cds size942
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186038.6240487-CDS-P-wetherbeei_contig14957:2..9441683186038.6240487-CDS-P-wetherbeei_contig14957:2..944Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14957 3..944 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14957.1.1prot_P-wetherbeei_contig14957.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14957 3..944 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14957.1.1

>prot_P-wetherbeei_contig14957.1.1 ID=prot_P-wetherbeei_contig14957.1.1|Name=mRNA_P-wetherbeei_contig14957.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=314bp
RILVLALLLACALDSVAASGRVFVTNEKGDSVSVIDAKTNQVIKTIAIGK
RPRGVGMAPDGSAVYVAVSGANHIAVIDPVSLELKGQFASGNDPEAFAVH
SNGNIYISNEEDAKASVIDPRSGKLVAEIEVGIEPEGVAISPDGTRAIVT
SESTNMLHIIAIPEHTVVNNILVGARPRSATFSADGKLAYATSEIGGEVK
KVDVASGTILGRMTLSDDQAKPKDIMVSRDGKRLYVAGGRANRVFVLDSN
SLEVITSVPVGKRVWGLALSRDGSHLYTTDGADDQVSVIDTKSNAVTTRI
AVGAGPWGIVIDD*
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mRNA from alignment at P-wetherbeei_contig14957:3..944+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14957.1.1 ID=mRNA_P-wetherbeei_contig14957.1.1|Name=mRNA_P-wetherbeei_contig14957.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=942bp|location=Sequence derived from alignment at P-wetherbeei_contig14957:3..944+ (Phaeothamnion wetherbeei SAG_119_79)
CGTATCCTCGTTCTTGCCCTGTTGCTCGCCTGTGCGCTCGACAGCGTCGC GGCTAGCGGTCGCGTGTTCGTCACCAATGAAAAAGGCGACAGCGTCAGCG TCATCGACGCCAAAACCAATCAGGTCATCAAAACCATCGCCATCGGCAAG CGCCCGCGTGGGGTCGGTATGGCGCCTGATGGCAGCGCGGTCTATGTCGC GGTCAGCGGTGCCAATCACATCGCCGTCATAGACCCCGTCAGCCTCGAGC TCAAAGGCCAGTTCGCCAGCGGCAACGACCCCGAAGCCTTTGCCGTGCAC AGCAACGGCAATATCTATATCTCCAACGAGGAAGACGCCAAAGCCTCGGT CATCGACCCGCGCAGCGGTAAGCTGGTGGCGGAAATCGAAGTGGGTATAG AACCGGAAGGTGTCGCCATTTCGCCGGACGGCACGCGCGCCATAGTTACC AGCGAATCGACCAATATGCTGCACATCATCGCCATCCCGGAACACACCGT GGTGAATAACATCCTGGTTGGCGCACGACCACGCTCAGCCACTTTCAGTG CCGATGGCAAACTGGCCTATGCGACCTCCGAAATTGGCGGCGAGGTGAAG AAAGTCGATGTTGCGAGTGGCACCATCCTCGGTCGAATGACCTTGAGCGA CGATCAGGCCAAGCCCAAGGACATCATGGTCAGTCGTGACGGTAAGCGAC TGTATGTCGCAGGCGGTCGCGCCAACCGCGTGTTCGTGCTCGATTCCAAC AGTTTGGAAGTCATTACCAGCGTACCGGTAGGCAAGCGCGTATGGGGTCT CGCCCTGTCACGCGACGGCAGCCACCTCTATACCACCGACGGCGCCGACG ACCAGGTGTCGGTCATCGATACCAAGAGCAATGCGGTCACCACCAGGATT GCAGTCGGCGCGGGGCCGTGGGGCATTGTCATCGACGATTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14957:3..944+

>mRNA_P-wetherbeei_contig14957.1.1 ID=mRNA_P-wetherbeei_contig14957.1.1|Name=mRNA_P-wetherbeei_contig14957.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=942bp|location=Sequence derived from alignment at P-wetherbeei_contig14957:3..944+ (Phaeothamnion wetherbeei SAG_119_79)
CGTATCCTCGTTCTTGCCCTGTTGCTCGCCTGTGCGCTCGACAGCGTCGC
GGCTAGCGGTCGCGTGTTCGTCACCAATGAAAAAGGCGACAGCGTCAGCG
TCATCGACGCCAAAACCAATCAGGTCATCAAAACCATCGCCATCGGCAAG
CGCCCGCGTGGGGTCGGTATGGCGCCTGATGGCAGCGCGGTCTATGTCGC
GGTCAGCGGTGCCAATCACATCGCCGTCATAGACCCCGTCAGCCTCGAGC
TCAAAGGCCAGTTCGCCAGCGGCAACGACCCCGAAGCCTTTGCCGTGCAC
AGCAACGGCAATATCTATATCTCCAACGAGGAAGACGCCAAAGCCTCGGT
CATCGACCCGCGCAGCGGTAAGCTGGTGGCGGAAATCGAAGTGGGTATAG
AACCGGAAGGTGTCGCCATTTCGCCGGACGGCACGCGCGCCATAGTTACC
AGCGAATCGACCAATATGCTGCACATCATCGCCATCCCGGAACACACCGT
GGTGAATAACATCCTGGTTGGCGCACGACCACGCTCAGCCACTTTCAGTG
CCGATGGCAAACTGGCCTATGCGACCTCCGAAATTGGCGGCGAGGTGAAG
AAAGTCGATGTTGCGAGTGGCACCATCCTCGGTCGAATGACCTTGAGCGA
CGATCAGGCCAAGCCCAAGGACATCATGGTCAGTCGTGACGGTAAGCGAC
TGTATGTCGCAGGCGGTCGCGCCAACCGCGTGTTCGTGCTCGATTCCAAC
AGTTTGGAAGTCATTACCAGCGTACCGGTAGGCAAGCGCGTATGGGGTCT
CGCCCTGTCACGCGACGGCAGCCACCTCTATACCACCGACGGCGCCGACG
ACCAGGTGTCGGTCATCGATACCAAGAGCAATGCGGTCACCACCAGGATT
GCAGTCGGCGCGGGGCCGTGGGGCATTGTCATCGACGATTGA
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