mRNA_P-wetherbeei_contig104.10.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig104.10.1
Unique NamemRNA_P-wetherbeei_contig104.10.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig104.10.1 vs. uniprot
Match: A0A2E7I5J3_9PROT (Phosphoribosylformylglycinamidine synthase subunit PurS n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E7I5J3_9PROT)

HSP 1 Score: 121 bits (304), Expect = 1.610e-34
Identity = 56/80 (70.00%), Postives = 68/80 (85.00%), Query Frame = 1 
Query:    1 MKARIHITLKKGVLDPQGKAIANALTHLGFDGVEGVRQGKYIEIDLSDKDVEKARIKLDAMCAQLLANTVIENYAVELDQ 240
            MKA +HITLK GVLDPQGKAI+N+LT LGFDGVEGVRQGK+IE+DL+D D E A+ ++  MC +LLANTVIENY VE+ +
Sbjct:    1 MKAHVHITLKNGVLDPQGKAISNSLTSLGFDGVEGVRQGKFIELDLADSDAEVAKARVSKMCEKLLANTVIENYTVEISE 80
[Close]
BLAST of mRNA_P-wetherbeei_contig104.10.1 vs. uniprot
Match: A0A353LSD3_9PROT (Phosphoribosylformylglycinamidine synthase subunit PurS n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A353LSD3_9PROT)

HSP 1 Score: 120 bits (302), Expect = 3.070e-34
Identity = 58/79 (73.42%), Postives = 67/79 (84.81%), Query Frame = 1 
Query:    1 MKARIHITLKKGVLDPQGKAIANALTHLGFDGVEGVRQGKYIEIDLSDKDVEKARIKLDAMCAQLLANTVIENYAVELD 237
            MKARIHITLK GVLDPQGKAI   L+HLGF GVE VRQGKYIE++L++ D  KA   +DAMC+QLLANTVIENYA+EL+
Sbjct:    1 MKARIHITLKNGVLDPQGKAIETTLSHLGFAGVEDVRQGKYIELELNETDRNKAHAAVDAMCSQLLANTVIENYAIELE 79
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BLAST of mRNA_P-wetherbeei_contig104.10.1 vs. uniprot
Match: A0A2D6M2N2_9PROT (Phosphoribosylformylglycinamidine synthase subunit PurS n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D6M2N2_9PROT)

HSP 1 Score: 120 bits (301), Expect = 4.490e-34
Identity = 58/79 (73.42%), Postives = 68/79 (86.08%), Query Frame = 1 
Query:    1 MKARIHITLKKGVLDPQGKAIANALTHLGFDGVEGVRQGKYIEIDLSDKDVEKARIKLDAMCAQLLANTVIENYAVELD 237
            MKARIHITLK+GVLDPQGKAIANAL  LGF  V+GVRQGKYIEIDL + D E AR  +DAMC +LLANTVIE+Y++E++
Sbjct:    1 MKARIHITLKQGVLDPQGKAIANALEALGFSDVDGVRQGKYIEIDLQENDSEAARASVDAMCEKLLANTVIEDYSIEIE 79
[Close]
BLAST of mRNA_P-wetherbeei_contig104.10.1 vs. uniprot
Match: A0A2D6TA04_9PROT (Phosphoribosylformylglycinamidine synthase subunit PurS n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D6TA04_9PROT)

HSP 1 Score: 119 bits (299), Expect = 1.180e-33
Identity = 54/79 (68.35%), Postives = 68/79 (86.08%), Query Frame = 1 
Query:    1 MKARIHITLKKGVLDPQGKAIANALTHLGFDGVEGVRQGKYIEIDLSDKDVEKARIKLDAMCAQLLANTVIENYAVELD 237
            M AR+H+TLKKGVLDPQGKAIA AL  LGFDG++GVRQGKYIE+DL D D E AR +++ MC +LLANTVIE+Y++E++
Sbjct:    1 MLARVHVTLKKGVLDPQGKAIARALEALGFDGIDGVRQGKYIELDLGDSDTEAARTRVEEMCGKLLANTVIEDYSIEVE 79
[Close]
BLAST of mRNA_P-wetherbeei_contig104.10.1 vs. uniprot
Match: A0A2D4VHN8_9HYPH (Phosphoribosylformylglycinamidine synthase subunit PurS n=2 Tax=Parvibaculum TaxID=256616 RepID=A0A2D4VHN8_9HYPH)

HSP 1 Score: 119 bits (298), Expect = 1.330e-33
Identity = 58/80 (72.50%), Postives = 67/80 (83.75%), Query Frame = 1 
Query:    1 MKARIHITLKKGVLDPQGKAIANALTHLGFDGVEGVRQGKYIEIDLSDKDVEKARIKLDAMCAQLLANTVIENYAVELDQ 240
            MKARI +TLK GVLDPQGKAI +AL  LGFDGVEGVRQGK+IE++L++ D  KA   LD MC QLLANTVIENYA+ELD+
Sbjct:    1 MKARIKVTLKNGVLDPQGKAIQHALGALGFDGVEGVRQGKFIEVELAETDKAKAEAALDEMCRQLLANTVIENYAIELDE 80
[Close]
BLAST of mRNA_P-wetherbeei_contig104.10.1 vs. uniprot
Match: A0A4R3JGK5_9PROT (Phosphoribosylformylglycinamidine synthase subunit PurS n=1 Tax=Varunaivibrio sulfuroxidans TaxID=1773489 RepID=A0A4R3JGK5_9PROT)

HSP 1 Score: 119 bits (297), Expect = 1.830e-33
Identity = 53/78 (67.95%), Postives = 67/78 (85.90%), Query Frame = 1 
Query:    1 MKARIHITLKKGVLDPQGKAIANALTHLGFDGVEGVRQGKYIEIDLSDKDVEKARIKLDAMCAQLLANTVIENYAVEL 234
            MKA++H+TLK GVLDPQGKA+ + L  LGFDGV+ VRQGKYIE+DL + D +KAR ++DAMC QLLANTVIENY++E+
Sbjct:    1 MKAKVHVTLKNGVLDPQGKAVQHTLASLGFDGVDNVRQGKYIELDLLETDADKARAQVDAMCRQLLANTVIENYSIEI 78
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BLAST of mRNA_P-wetherbeei_contig104.10.1 vs. uniprot
Match: UPI0003B6263C (phosphoribosylformylglycinamidine synthase subunit PurS n=2 Tax=Fodinicurvata TaxID=1121829 RepID=UPI0003B6263C)

HSP 1 Score: 118 bits (296), Expect = 2.600e-33
Identity = 56/79 (70.89%), Postives = 67/79 (84.81%), Query Frame = 1 
Query:    1 MKARIHITLKKGVLDPQGKAIANALTHLGFDGVEGVRQGKYIEIDLSDKDVEKARIKLDAMCAQLLANTVIENYAVELD 237
            MKARIH+TLK GVLDPQGK I++AL  LGFDGVE VRQGKY+E+DL + D EKAR ++D MC +LLANTVIENY VE++
Sbjct:    1 MKARIHVTLKPGVLDPQGKTISHALDALGFDGVEEVRQGKYLELDLKESDPEKARAEVDEMCRKLLANTVIENYQVEIE 79
[Close]
BLAST of mRNA_P-wetherbeei_contig104.10.1 vs. uniprot
Match: A0A7D5MXK2_9PROT (Phosphoribosylformylglycinamidine synthase subunit PurS n=1 Tax=Defluviicoccus sp. TaxID=2682137 RepID=A0A7D5MXK2_9PROT)

HSP 1 Score: 118 bits (295), Expect = 3.690e-33
Identity = 57/78 (73.08%), Postives = 68/78 (87.18%), Query Frame = 1 
Query:    1 MKARIHITLKKGVLDPQGKAIANALTHLGFDGVEGVRQGKYIEIDLSDKDVEKARIKLDAMCAQLLANTVIENYAVEL 234
            MKAR+HITLK GVLDPQGKA+ ++L+ LGFDGVE VRQGKYIEIDL+D D   A+ +LDAMC QLLANTVIENYA+++
Sbjct:    1 MKARVHITLKPGVLDPQGKAVQHSLSALGFDGVEQVRQGKYIEIDLADGDRTLAQERLDAMCRQLLANTVIENYAIDI 78
[Close]
BLAST of mRNA_P-wetherbeei_contig104.10.1 vs. uniprot
Match: A0A2E5KN82_9PROT (Phosphoribosylformylglycinamidine synthase subunit PurS n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E5KN82_9PROT)

HSP 1 Score: 117 bits (294), Expect = 5.400e-33
Identity = 54/79 (68.35%), Postives = 68/79 (86.08%), Query Frame = 1 
Query:    1 MKARIHITLKKGVLDPQGKAIANALTHLGFDGVEGVRQGKYIEIDLSDKDVEKARIKLDAMCAQLLANTVIENYAVELD 237
            MKAR+HITLK GVLDPQGKA+ NALT LGF+GV+ VRQGKY+E+DL + D E+AR  ++AMC +LLANTVIE+Y +EL+
Sbjct:    1 MKARVHITLKSGVLDPQGKAVHNALTSLGFNGVDDVRQGKYLELDLVESDAEQARAAVEAMCTRLLANTVIEDYQIELE 79
[Close]
BLAST of mRNA_P-wetherbeei_contig104.10.1 vs. uniprot
Match: A0A2E6QIV0_9PROT (Phosphoribosylformylglycinamidine synthase subunit PurS n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6QIV0_9PROT)

HSP 1 Score: 117 bits (293), Expect = 7.250e-33
Identity = 55/79 (69.62%), Postives = 69/79 (87.34%), Query Frame = 1 
Query:    1 MKARIHITLKKGVLDPQGKAIANALTHLGFDGVEGVRQGKYIEIDLSDKDVEKARIKLDAMCAQLLANTVIENYAVELD 237
            MKA++HITLK GVLDPQGKAI++AL  LGFDG+E VRQGKYIEI L++ D E AR K++AMC++LLAN VIENY++EL+
Sbjct:    1 MKAKVHITLKTGVLDPQGKAISHALDSLGFDGIEDVRQGKYIEIRLAETDAETARSKVEAMCSRLLANPVIENYSIELE 79
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig104.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E7I5J3_9PROT1.610e-3470.00Phosphoribosylformylglycinamidine synthase subunit... [more]
A0A353LSD3_9PROT3.070e-3473.42Phosphoribosylformylglycinamidine synthase subunit... [more]
A0A2D6M2N2_9PROT4.490e-3473.42Phosphoribosylformylglycinamidine synthase subunit... [more]
A0A2D6TA04_9PROT1.180e-3368.35Phosphoribosylformylglycinamidine synthase subunit... [more]
A0A2D4VHN8_9HYPH1.330e-3372.50Phosphoribosylformylglycinamidine synthase subunit... [more]
A0A4R3JGK5_9PROT1.830e-3367.95Phosphoribosylformylglycinamidine synthase subunit... [more]
UPI0003B6263C2.600e-3370.89phosphoribosylformylglycinamidine synthase subunit... [more]
A0A7D5MXK2_9PROT3.690e-3373.08Phosphoribosylformylglycinamidine synthase subunit... [more]
A0A2E5KN82_9PROT5.400e-3368.35Phosphoribosylformylglycinamidine synthase subunit... [more]
A0A2E6QIV0_9PROT7.250e-3369.62Phosphoribosylformylglycinamidine synthase subunit... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig104contigP-wetherbeei_contig104:8168..8410 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog570952.ATVH01000011_gene309
Preferred namepurS
PFAMsPurS
Model size243
Max annot lvl204441|Rhodospirillales
KEGG rclassRC00010,RC01160
KEGG koko:K01952
KEGG ReactionR04463
KEGG Pathwayko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130
KEGG ModuleM00048
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.26e-34
EggNOG OGsCOG1828@1|root,COG1828@2|Bacteria,1N83G@1224|Proteobacteria,2UF7S@28211|Alphaproteobacteria,2JTEV@204441|Rhodospirillales
EC6.3.5.3
DescriptionPart of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
Cds size243
COG categoryF
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185867.5598383-CDS-P-wetherbeei_contig104:8167..84101683185867.5598383-CDS-P-wetherbeei_contig104:8167..8410Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig104 8168..8410 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig104.10.1prot_P-wetherbeei_contig104.10.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig104 8168..8410 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig104.10.1

>prot_P-wetherbeei_contig104.10.1 ID=prot_P-wetherbeei_contig104.10.1|Name=mRNA_P-wetherbeei_contig104.10.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=81bp
MKARIHITLKKGVLDPQGKAIANALTHLGFDGVEGVRQGKYIEIDLSDKD
VEKARIKLDAMCAQLLANTVIENYAVELDQ*
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mRNA from alignment at P-wetherbeei_contig104:8168..8410-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig104.10.1 ID=mRNA_P-wetherbeei_contig104.10.1|Name=mRNA_P-wetherbeei_contig104.10.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=243bp|location=Sequence derived from alignment at P-wetherbeei_contig104:8168..8410- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGGCACGTATTCACATTACCTTGAAAAAAGGTGTTCTTGATCCCCA
GGGCAAGGCCATTGCCAATGCGCTGACCCATCTGGGGTTTGATGGGGTCG
AAGGTGTCCGCCAGGGGAAATATATCGAGATCGACCTGTCCGACAAAGAT
GTTGAAAAGGCCCGCATCAAACTGGACGCCATGTGTGCCCAGCTGCTGGC
CAACACCGTTATCGAAAACTATGCGGTTGAGCTGGACCAGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig104:8168..8410-

>mRNA_P-wetherbeei_contig104.10.1 ID=mRNA_P-wetherbeei_contig104.10.1|Name=mRNA_P-wetherbeei_contig104.10.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=243bp|location=Sequence derived from alignment at P-wetherbeei_contig104:8168..8410- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGGCACGTATTCACATTACCTTGAAAAAAGGTGTTCTTGATCCCCA
GGGCAAGGCCATTGCCAATGCGCTGACCCATCTGGGGTTTGATGGGGTCG
AAGGTGTCCGCCAGGGGAAATATATCGAGATCGACCTGTCCGACAAAGAT
GTTGAAAAGGCCCGCATCAAACTGGACGCCATGTGTGCCCAGCTGCTGGC
CAACACCGTTATCGAAAACTATGCGGTTGAGCTGGACCAGTGA
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