prot_P-wetherbeei_contig1494.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1494.1.1
Unique Nameprot_P-wetherbeei_contig1494.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length511
Homology
BLAST of mRNA_P-wetherbeei_contig1494.1.1 vs. uniprot
Match: D7FJK8_ECTSI (rRNA biogenesis protein RRP36 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJK8_ECTSI)

HSP 1 Score: 196 bits (498), Expect = 3.240e-55
Identity = 107/175 (61.14%), Postives = 140/175 (80.00%), Query Frame = 0
Query:  328 PARLGKNRPQEMSSRRAVGRHRQVVESEQRRGRDPRFEALSG--RLNYDVFRKSYSFLEGYQDGEVDQLRKALRKEKNPERSAKIQAALTKLQQERATRLRADATTAALRSAKRAEAEKVAAGKAPFYLKKSEKRRVALEQRYAELEKEGRLAKFLEKKRKRNAAKDHRWLPGSR 500
            P+R  KNRPQE SSRRAVGR R+VV ++++  RDPRFE   G  +LNYD+FRK+Y FL  YQD E+++L+K+L+KEKN ERS ++QA LT+LQQERA R + D T  A+R AK+ E E VA+GK PF+LK SEK+R++LEQRY  L+++G+L+KF+EKKRK+NAAKDHRWLP  R
Sbjct:  117 PSRANKNRPQEASSRRAVGRFREVVVTKRKTSRDPRFEGGGGSSKLNYDIFRKAYGFLGTYQDSEIEELKKSLKKEKNQERSGRLQALLTRLQQERAERSQGDRTRTAIREAKKKEREAVASGKKPFFLKGSEKKRLSLEQRYEGLKEDGKLSKFMEKKRKKNAAKDHRWLPSKR 291          
BLAST of mRNA_P-wetherbeei_contig1494.1.1 vs. uniprot
Match: A0A835YP85_9STRA (rRNA biogenesis protein RRP36 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP85_9STRA)

HSP 1 Score: 196 bits (498), Expect = 2.430e-54
Identity = 110/181 (60.77%), Postives = 138/181 (76.24%), Query Frame = 0
Query:  328 PARLGKNRPQEMSSRRAVGRHRQVVESEQRRGRDPRFEALSGRLNYDVFRKSYSFLEGYQDGEVDQLRKALRKEK------NPERSAKIQAALTKLQQERATRLRADATTAALRSAKRAEAEKVAAGKAPFYLKKSEKRRVALEQRYAELEKEGRLAKFLEKKRKRNAAKDHRWLPGSRRS 502
            P R  KN+P EMSS+RAVGRHR+VVE  +RR RDPRF+A +G LNYD+FRKSY FLEGYQDGE+D LRK   K K      + ER+A  +A LTK+QQERA R RADAT AAL   ++AEAE VA GKAP+++K  ++R +ALE RY EL +EG++ KF++KKRKRNAAKD RW+P  R++
Sbjct:  175 PKRANKNQPMEMSSKRAVGRHREVVEVRRRRARDPRFDAATGTLNYDMFRKSYEFLEGYQDGEIDALRKEAAKAKKRRGDGSAERAAAAKALLTKMQQERAERKRADATRAALSQRRKAEAEAVAKGKAPYFMKARDRRALALETRYEELRREGKVQKFVQKKRKRNAAKDRRWMPAKRQN 355          
BLAST of mRNA_P-wetherbeei_contig1494.1.1 vs. uniprot
Match: T0S1H5_SAPDV (rRNA biogenesis protein RRP36 n=2 Tax=Saprolegnia TaxID=4769 RepID=T0S1H5_SAPDV)

HSP 1 Score: 150 bits (380), Expect = 5.820e-39
Identity = 84/172 (48.84%), Postives = 123/172 (71.51%), Query Frame = 0
Query:  330 RLGKNRPQEMSSRRAVGRHRQVVESEQRRGRDPRFEALSGRLNYDVFRKSYSFLEGYQDGEVDQLRKALRKEKNPERSAKIQAALTKLQQERATRLRADATTAALRSAKRAEAEKVAAGKAPFYLKKSEKRRVALEQRYAELEKEGRLAKFLEKKRKRNAAKDHRWLPGSRR 501
            R  KN P+EM+S+R V R R+V++  ++  RDPRF+A SG+LN D+F+K+Y+FLE Y+D E+D+++K L+K K+  R A ++  L   +QERA   RAD    A +  KR E E VA GK+ FYLK+ +K++V L+ +Y EL++ GRL+KF+ K+RK+NA KDHRWLP  R+
Sbjct:   46 RANKNCPREMTSKRPVARFREVLQIRKKASRDPRFDAASGKLNEDLFKKAYTFLEDYKDAELDEVKKQLKKAKSATRKAALKEELASRKQERAETHRADKIREATQKRKREEREAVANGKSAFYLKRKDKKQVELKAKYDELQESGRLSKFMAKRRKKNANKDHRWLPTQRK 217          
BLAST of mRNA_P-wetherbeei_contig1494.1.1 vs. uniprot
Match: A0A662WCQ7_9STRA (rRNA biogenesis protein RRP36 n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WCQ7_9STRA)

HSP 1 Score: 149 bits (375), Expect = 3.930e-38
Identity = 84/172 (48.84%), Postives = 123/172 (71.51%), Query Frame = 0
Query:  330 RLGKNRPQEMSSRRAVGRHRQVVESEQRRGRDPRFEALSGRLNYDVFRKSYSFLEGYQDGEVDQLRKALRKEKNPERSAKIQAALTKLQQERATRLRADATTAALRSAKRAEAEKVAAGKAPFYLKKSEKRRVALEQRYAELEKEGRLAKFLEKKRKRNAAKDHRWLPGSRR 501
            R  KNRP E++S+RAVGR +QVVE ++RR  DPRFEA SGRLN D+F KSYSFL+ Y+  E+ +L++ L+  K+  R  +I+  ++   QER+ + + +    AL   KR E E VA+GK PFYLK+ +K+++ L+ ++  L++ GRL+KF+ KKRK+NA+KDHRWLP  R+
Sbjct:   58 RANKNRPMELTSKRAVGRFKQVVEVKKRRVLDPRFEAQSGRLNEDLFAKSYSFLDEYKQRELGELKRQLKSAKSTTRKEEIKHEISLRSQERSEKQKTEKIRDALTKRKREEREAVASGKNPFYLKRKDKKKLELQAKFQNLQETGRLSKFMAKKRKKNASKDHRWLPTQRK 229          
BLAST of mRNA_P-wetherbeei_contig1494.1.1 vs. uniprot
Match: A0A1V9YXH6_9STRA (rRNA biogenesis protein RRP36 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YXH6_9STRA)

HSP 1 Score: 148 bits (373), Expect = 4.980e-38
Identity = 84/173 (48.55%), Postives = 122/173 (70.52%), Query Frame = 0
Query:  330 RLGKNRPQEMSSRRAVGRHRQVVESEQRRGRDPRFEALSGRLNYDVFRKSYSFLEGYQDGEVDQLRKALRKEKNPERSAKIQAALTKLQQERATRLRADATTAALRSAKRAEAEKVAAGKAPFYLKKSEKRRVALEQRYAELEKEGRLAKFLEKKRKRNAAKDHRWLPGSRRS 502
            R  KN P+EM+S+R V R R+V++  ++  RDPRF+  SG+LN D+F+KSY+FLE Y+D E+D ++K LRK K+  R  +++A L   +QERA   RAD    A    KR E E VA GK+ FYLK+ +K+++ L+ +Y EL++ GRL+KF+ K+RK+NA KDHRWLP  R++
Sbjct:   42 RANKNCPREMTSKRPVARFREVLQIRKKGSRDPRFDNASGKLNEDLFKKSYAFLEDYKDAELDDVKKQLRKAKSKTRREELKADLATRKQERAESHRADRIREATLKRKREEREAVANGKSAFYLKRKDKKQIELKAKYDELQESGRLSKFMAKRRKKNANKDHRWLPTQRKT 214          
BLAST of mRNA_P-wetherbeei_contig1494.1.1 vs. uniprot
Match: A0A3M6VW06_9STRA (rRNA biogenesis protein RRP36 n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VW06_9STRA)

HSP 1 Score: 147 bits (372), Expect = 7.330e-38
Identity = 84/172 (48.84%), Postives = 123/172 (71.51%), Query Frame = 0
Query:  330 RLGKNRPQEMSSRRAVGRHRQVVESEQRRGRDPRFEALSGRLNYDVFRKSYSFLEGYQDGEVDQLRKALRKEKNPERSAKIQAALTKLQQERATRLRADATTAALRSAKRAEAEKVAAGKAPFYLKKSEKRRVALEQRYAELEKEGRLAKFLEKKRKRNAAKDHRWLPGSRR 501
            R  KN+P E+SS+RAVGR RQVVE +++R  DPRFEA SGRLN D+F KSY+FL+ Y+  E+ QL++ L+K K+  +  +++  +   QQE   + + D   +AL   KR E E VA+GK  FYLK+ +K++V L+ ++ +L++ GRL+KF+ KKRK+NA+KDHRWLP  R+
Sbjct:   45 RANKNQPLELSSKRAVGRFRQVVEVKKKRLLDPRFEAQSGRLNEDLFNKSYAFLDEYKQRELQQLKQQLKKTKSVAKKDELKHEIALRQQEMTEKQKRDKIQSALTKRKREEREAVASGKGAFYLKRKDKKKVELQAKFQDLQETGRLSKFMAKKRKKNASKDHRWLPTQRK 216          
BLAST of mRNA_P-wetherbeei_contig1494.1.1 vs. uniprot
Match: G4YS32_PHYSP (rRNA biogenesis protein RRP36 n=4 Tax=Phytophthora TaxID=4783 RepID=G4YS32_PHYSP)

HSP 1 Score: 147 bits (371), Expect = 9.920e-38
Identity = 82/172 (47.67%), Postives = 123/172 (71.51%), Query Frame = 0
Query:  330 RLGKNRPQEMSSRRAVGRHRQVVESEQRRGRDPRFEALSGRLNYDVFRKSYSFLEGYQDGEVDQLRKALRKEKNPERSAKIQAALTKLQQERATRLRADATTAALRSAKRAEAEKVAAGKAPFYLKKSEKRRVALEQRYAELEKEGRLAKFLEKKRKRNAAKDHRWLPGSRR 501
            R  KN+P E+SS+RAVGR RQVVE ++RR  DPRFEA SGRLN D+F KSY+FL+ Y+  E+ +L++ L+K K+  +  +++  +   QQE   + + +   +AL   KR E E VA+GK  FYLK+ +K+++ L+ ++ +L++ GRL+KF+ KKRK+NA+KDHRWLP  R+
Sbjct:   44 RANKNQPLELSSKRAVGRFRQVVEVKKRRALDPRFEAQSGRLNEDLFNKSYAFLDDYKQRELQELKQQLKKTKSVTKKDELKHEIALRQQEMTEKQKTEKIKSALTKRKREEREAVASGKGAFYLKRKDKKKLELQAKFQDLQETGRLSKFMAKKRKKNASKDHRWLPTQRK 215          
BLAST of mRNA_P-wetherbeei_contig1494.1.1 vs. uniprot
Match: A0A2P4X8B4_9STRA (rRNA biogenesis protein RRP36 n=2 Tax=Phytophthora TaxID=4783 RepID=A0A2P4X8B4_9STRA)

HSP 1 Score: 145 bits (367), Expect = 3.940e-37
Identity = 82/172 (47.67%), Postives = 123/172 (71.51%), Query Frame = 0
Query:  330 RLGKNRPQEMSSRRAVGRHRQVVESEQRRGRDPRFEALSGRLNYDVFRKSYSFLEGYQDGEVDQLRKALRKEKNPERSAKIQAALTKLQQERATRLRADATTAALRSAKRAEAEKVAAGKAPFYLKKSEKRRVALEQRYAELEKEGRLAKFLEKKRKRNAAKDHRWLPGSRR 501
            R  KN+P E+SS+RAVGR RQVVE +++R  DPRFEA SGRLN D+F KSY+FL+ Y+  E+ +L++ L+K KN  +  +++  +   QQE   + + +   +AL   KR E E VA+GK  FYLK+ +K+++ L+ ++ +L++ GRL+KF+ KKRK+NA+KDHRWLP  R+
Sbjct:   46 RANKNQPLELSSKRAVGRFRQVVEVKKKRVLDPRFEAQSGRLNEDLFNKSYAFLDEYKQRELQELKQQLKKTKNMTKKDELKHEIALRQQEMTEKNKQEKIKSALTKRKREEREAVASGKGAFYLKRKDKKKLELQAKFQDLQETGRLSKFMAKKRKKNASKDHRWLPTQRK 217          
BLAST of mRNA_P-wetherbeei_contig1494.1.1 vs. uniprot
Match: A0A024GFI2_9STRA (rRNA biogenesis protein RRP36 n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GFI2_9STRA)

HSP 1 Score: 144 bits (362), Expect = 1.830e-36
Identity = 81/168 (48.21%), Postives = 114/168 (67.86%), Query Frame = 0
Query:  330 RLGKNRPQEMSSRRAVGRHRQVVESEQRRGRDPRFEALSGRLNYDVFRKSYSFLEGYQDGEVDQLRKALRKEKNPERSAKIQAALTKLQQERATRLRADATTAALRSAKRAEAEKVAAGKAPFYLKKSEKRRVALEQRYAELEKEGRLAKFLEKKRKRNAAKDHRWLP 497
            R  KN+P EM+S++ VGR RQVV+   +R  DPRF+ L G+LN D+F KSYSFL+ Y++ E+D LRK ++K KN ER   +Q  +  L QE   + ++     AL   KR E E V  GK+PFY+K+ +K++V L+ ++ ELE+ G LA F+ KKRK+N+ KDHRWLP
Sbjct:   42 RSNKNQPIEMTSKKPVGRFRQVVDVRNKRPHDPRFDPLCGKLNQDLFAKSYSFLDSYKENELDTLRKEVKKAKNKERKGDLQQKVNVLAQEIKEKKKSSRLQNALTERKRQEREAVINGKSPFYMKRKDKKKVELQIKFQELEESGNLANFMAKKRKKNSNKDHRWLP 209          
BLAST of mRNA_P-wetherbeei_contig1494.1.1 vs. uniprot
Match: A0A7S2Y0G1_9STRA (rRNA biogenesis protein RRP36 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0G1_9STRA)

HSP 1 Score: 142 bits (359), Expect = 6.150e-36
Identity = 91/187 (48.66%), Postives = 125/187 (66.84%), Query Frame = 0
Query:  330 RLGKNRPQEMSSRRAVGRHRQVV---------ESEQRRGRDPRFEALSGRLNYDVFRKSYSFLEGYQDGEVD----QLRKALRKEKN-PERSAKIQAALTKLQQERATRLRADATTAALRSAKRAEAEKVAAGKAP-FYLKKSEKRRVALEQRYAELEKEGRLAKFLEKKRKRNAAKDHRWLPGSRR 501
            R  KNRP E SS+  VGR+R V           +++ + RDPRFE +SG++NYD+FRK+Y FLE YQD E+     +L+KA +K K+  ER +++Q AL KL+QER+ R+R D     L + K+ E   V  GK   FYLK   K+ + LEQRY EL+++G+L KF+EKKRK+NA+KDHRWLP +RR
Sbjct:   34 RENKNRPVERSSKVPVGRYRDVAVRPGDGSQSTAQKYQPRDPRFEGVSGKMNYDLFRKTYQFLEQYQDSEIQALEAELKKAQKKSKSGAERVSEVQLALQKLRQERSQRVRGDRVRGVLGAHKKLERRAVQQGKKKAFYLKGKAKKEIVLEQRYQELKEKGQLKKFMEKKRKKNASKDHRWLPAARR 220          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1494.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJK8_ECTSI3.240e-5561.14rRNA biogenesis protein RRP36 n=2 Tax=Ectocarpus T... [more]
A0A835YP85_9STRA2.430e-5460.77rRNA biogenesis protein RRP36 n=1 Tax=Tribonema mi... [more]
T0S1H5_SAPDV5.820e-3948.84rRNA biogenesis protein RRP36 n=2 Tax=Saprolegnia ... [more]
A0A662WCQ7_9STRA3.930e-3848.84rRNA biogenesis protein RRP36 n=2 Tax=Nothophytoph... [more]
A0A1V9YXH6_9STRA4.980e-3848.55rRNA biogenesis protein RRP36 n=1 Tax=Achlya hypog... [more]
A0A3M6VW06_9STRA7.330e-3848.84rRNA biogenesis protein RRP36 n=1 Tax=Peronospora ... [more]
G4YS32_PHYSP9.920e-3847.67rRNA biogenesis protein RRP36 n=4 Tax=Phytophthora... [more]
A0A2P4X8B4_9STRA3.940e-3747.67rRNA biogenesis protein RRP36 n=2 Tax=Phytophthora... [more]
A0A024GFI2_9STRA1.830e-3648.21rRNA biogenesis protein RRP36 n=1 Tax=Albugo candi... [more]
A0A7S2Y0G1_9STRA6.150e-3648.66rRNA biogenesis protein RRP36 (Fragment) n=1 Tax=F... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 454..474
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 174..195
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 327..363
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..279
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 336..363
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 480..511
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..107
IPR009292rRNA biogenesis protein RRP36PFAMPF06102RRP36coord: 332..494
e-value: 1.1E-46
score: 158.9
IPR009292rRNA biogenesis protein RRP36PANTHERPTHR21738UNCHARACTERIZEDcoord: 303..499

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1494contigP-wetherbeei_contig1494:644..2698 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1494.1.1mRNA_P-wetherbeei_contig1494.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1494 642..2698 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1494.1.1 ID=prot_P-wetherbeei_contig1494.1.1|Name=mRNA_P-wetherbeei_contig1494.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=511bp
MGKRTRTKRSREANGGPTPAPPASAQASRPGTNGVKRAPRPHAAISQPPV
TNAGALRTTWRGKDGLPSRGENGGAGEAQKGDRSKEEDGDKDRLARIRRR
ADIEPSSDEEDGGGGGSSGGSSGSEDGDEGDGAAPAEESDALARIRWRAE
IEPSSDEGGSSSDGATANEPYGDGGLESEEEDRNGDDDDKGDDDDEGSAG
FYRQGDGYSSDEADANNNGNRGGGGGSGRDGKAAGNDAADAAGLTMEERL
QLLGHGVGPPRKRRRTGADGVDAVGGSGLGRGRPAAAAATTLAARLGNGR
AAAMRADGDTAAATSGASAAAAAAAVAPARLGKNRPQEMSSRRAVGRHRQ
VVESEQRRGRDPRFEALSGRLNYDVFRKSYSFLEGYQDGEVDQLRKALRK
EKNPERSAKIQAALTKLQQERATRLRADATTAALRSAKRAEAEKVAAGKA
PFYLKKSEKRRVALEQRYAELEKEGRLAKFLEKKRKRNAAKDHRWLPGSR
RSMPGDAGGLE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009292RRP36