mRNA_P-wetherbeei_contig14932.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14932.1.1 vs. uniprot
Match: A0A7C4TPS5_9HYPH (RibD family protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4TPS5_9HYPH) HSP 1 Score: 293 bits (750), Expect = 1.600e-97 Identity = 146/221 (66.06%), Postives = 178/221 (80.54%), Query Frame = 1
Query: 4 DPYVPVRNAPAGRAFVIAQLGQSLDGRIATPTGESRWINQSCALDHVHRLRAAVDAVVVGVGTVVADDPLLTVRRVEGRHPVRVVIDPSGRCPSTARVFNDDGIRRILIRSPESGAAVPAGVEVIRIGASGRTLAPSDIVGALYSAGISTMLIEGGAWTVSQFIDDGAVDRLHVMVAPMLLGSGKTGLELRPIARLADARRPHTNVHVLPDGDVLFDCNLR 666
D +RNAP+ R FV+AQLGQSLDGRIAT TGESRWIN S ALDH+HRLRA+VDAVVVG+GT +ADDP LTVRRV GR+P RVVIDP G+ P +AR +DG RR+L+R+ ++ A+ P GVEV+ I A G+ L P+ IV AL+ G+ +LIEGGA T+SQFID G VDRLHV+VAP+++GSGKTGLEL PI RL+ ARRP+T VH+L DGDVLFDC+LR
Sbjct: 18 DVCAAIRNAPSNRPFVVAQLGQSLDGRIATITGESRWINSSAALDHLHRLRASVDAVVVGIGTALADDPQLTVRRVAGRNPARVVIDPEGQLPPSARCLVEDGARRLLVRASKA-ASCPRGVEVVTIDAVGKPLCPTAIVEALFERGLRRLLIEGGARTISQFIDAGTVDRLHVLVAPLIIGSGKTGLELAPIRRLSQARRPYTEVHLLADGDVLFDCDLR 237
BLAST of mRNA_P-wetherbeei_contig14932.1.1 vs. uniprot
Match: A0A2W4RDK2_9PROT (Deaminase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4RDK2_9PROT) HSP 1 Score: 284 bits (726), Expect = 5.230e-94 Identity = 143/229 (62.45%), Postives = 178/229 (77.73%), Query Frame = 1
Query: 4 DPYVPVRNAPAGRAFVIAQLGQSLDGRIATPTGESRWINQSCALDHVHRLRAAVDAVVVGVGTVVADDPLLTVRRVEGRHPVRVVIDPSGRCPSTARVFNDDGIRRILIRSPESGAAVPAGVEVIRIGASGRTLAPSDIVGALYSAGISTMLIEGGAWTVSQFIDDGAVDRLHVMVAPMLLGSGKTGLELRPIARLADARRPHTNVHVLPDGDVLFDCNLRTNWEGEKP 690
DP +R A + FV+AQLGQSLDGR+ATPTGESRWIN+ ALDH+HRLRA VDAVVVG+GTV+ADDP L VRRV G HP RVVIDP+G+ P A+ +DG RRI+IR+ + A VP GVEVIR+ + + P++IV AL+ G +LIEGGA TVS+FID GAVDRLH++VAP+++GSG+TGL LRPI+RL +ARRP T VH+L DGDVLFDC+LR+ +G P
Sbjct: 13 DPCEVIRRASLTQPFVVAQLGQSLDGRVATPTGESRWINRDAALDHLHRLRACVDAVVVGIGTVLADDPRLNVRRVSGPHPARVVIDPNGKLPVNAQCLAEDGARRIVIRACD--AQVPEGVEVIRLVSGPMGIDPNEIVAALFDRGFKRLLIEGGARTVSRFIDAGAVDRLHLLVAPLIIGSGQTGLALRPISRLCEARRPRTRVHLLDDGDVLFDCDLRS--DGRSP 237
BLAST of mRNA_P-wetherbeei_contig14932.1.1 vs. uniprot
Match: A0A2W4MVJ5_9PROT (Deaminase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4MVJ5_9PROT) HSP 1 Score: 283 bits (725), Expect = 8.780e-94 Identity = 140/219 (63.93%), Postives = 173/219 (79.00%), Query Frame = 1
Query: 16 PVRNAPAGRAFVIAQLGQSLDGRIATPTGESRWINQSCALDHVHRLRAAVDAVVVGVGTVVADDPLLTVRRVEGRHPVRVVIDPSGRCPSTARVFNDDGIRRILIRSPESGAAVPAGVEVIRIGASGRTLAPSDIVGALYSAGISTMLIEGGAWTVSQFIDDGAVDRLHVMVAPMLLGSGKTGLELRPIARLADARRPHTNVHVLPDGDVLFDCNLRTN 672
P+RNA GR +V+AQLGQSLDGR+ATP+GESRWIN+ ALDH+HRLRA VDAVVVGVGTV+ADDP L VRRV G HP RVVIDP+ R P++A+ DDG RRI++R+ + A PAGVEVIR+ + + P IV AL+ G+ +LIEGG T+S+FID AVDRLHV+VAP+++GSG TGL L PI RLA+ARRP T VH+L DGDVLFDC+LR++
Sbjct: 8 PIRNASPGRPYVVAQLGQSLDGRVATPSGESRWINRDAALDHLHRLRACVDAVVVGVGTVLADDPQLNVRRVTGSHPARVVIDPNARLPASAKCLADDGARRIVVRACQEPA--PAGVEVIRLPVTDGRMDPKAIVSALFECGLKKLLIEGGPQTISRFIDANAVDRLHVLVAPLIIGSGPTGLTLEPICRLAEARRPRTCVHLLEDGDVLFDCDLRSD 224
BLAST of mRNA_P-wetherbeei_contig14932.1.1 vs. uniprot
Match: A0A3S0G652_9HYPH (RibD family protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A3S0G652_9HYPH) HSP 1 Score: 273 bits (699), Expect = 9.260e-90 Identity = 142/225 (63.11%), Postives = 168/225 (74.67%), Query Frame = 1
Query: 1 PDPYVPVRNAPAGRAFVIAQLGQSLDGRIATPTGESRWINQSCALDHVHRLRAAVDAVVVGVGTVVADDPLLTVRRVEGRHPVRVVIDPSGRCPSTARVFNDDGIRRILIRSPESG--AAVPAGVEVIRIGASGRTLAPSDIVGALYSAGISTMLIEGGAWTVSQFIDDGAVDRLHVMVAPMLLGSGKTGLELRPIARLADARRPHTNVHVLPDGDVLFDCNLRT 669
PDP +R AP R FV+AQLGQSLDG+IAT +GESRWIN ALDHVH LRAAVDAVVVG GTV+ADDP L VRRV GR P RV+IDPSGR + A+ DG R L+++ +S A +P+ VE + + SG ++P IV AL++ G+ TMLIEGGA TVS FI D AVDRLHV+VAPM++GSGK GL L P+ARL DA RP T VHVL DGDVLFDC+LRT
Sbjct: 16 PDPLAAIRAAPGDRPFVVAQLGQSLDGKIATDSGESRWINNCAALDHVHALRAAVDAVVVGAGTVMADDPKLNVRRVPGRSPARVIIDPSGRLRADAKCLLADGCRVYLVQAEDSPEPAGLPSLVERVTVARSGPHISPRAIVAALFAKGLRTMLIEGGAMTVSSFIADAAVDRLHVLVAPMIIGSGKPGLVLPPLARLGDALRPKTTVHVLADGDVLFDCDLRT 240
BLAST of mRNA_P-wetherbeei_contig14932.1.1 vs. uniprot
Match: A0A7Y5CXD9_HYPSQ (RibD family protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A7Y5CXD9_HYPSQ) HSP 1 Score: 273 bits (698), Expect = 1.040e-89 Identity = 140/217 (64.52%), Postives = 166/217 (76.50%), Query Frame = 1
Query: 16 PVRNAPAGRAFVIAQLGQSLDGRIATPTGESRWINQSCALDHVHRLRAAVDAVVVGVGTVVADDPLLTVRRVEGRHPVRVVIDPSGRCPSTARVFNDDGIRRILIRSPESGAAVPAGVEVIRIGASGRTLAPSDIVGALYSAGISTMLIEGGAWTVSQFIDDGAVDRLHVMVAPMLLGSGKTGLELRPIARLADARRPHTNVHVLPDGDVLFDCNLR 666
P+ NA + R FVIAQLGQSLDGRIATPTG+SRWIN +CALDHVHRLRA VDAVVVG+GTVVADDP LTVRRV GRHP RVVIDP+ R P +A V DGIRR+++ P G E + +G G L P++IV AL+ G+ +LIEGGA T+S F+D G VDRLHV+VAP++LGSG TGL LR I L +ARRP T+VHVL DGDVLFDC+L+
Sbjct: 23 PLVNARSDRPFVIAQLGQSLDGRIATPTGDSRWINGNCALDHVHRLRANVDAVVVGIGTVVADDPYLTVRRVAGRHPARVVIDPNHRLPPSAHVLAADGIRRLIVCGETH--VCPQGSETVVVGRRGFLLDPAEIVSALFKLGLKKILIEGGASTISAFMDAGVVDRLHVLVAPVILGSGTTGLSLRAIQGLDEARRPRTSVHVLDDGDVLFDCDLQ 237
BLAST of mRNA_P-wetherbeei_contig14932.1.1 vs. uniprot
Match: A0A6N6T2I0_9HYPH (RibD family protein n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A6N6T2I0_9HYPH) HSP 1 Score: 272 bits (696), Expect = 1.960e-89 Identity = 140/223 (62.78%), Postives = 169/223 (75.78%), Query Frame = 1
Query: 4 DPYVPVRNAPAGRAFVIAQLGQSLDGRIATPTGESRWINQSCALDHVHRLRAAVDAVVVGVGTVVADDPLLTVRRVEGRHPVRVVIDPSGRCPSTARVFNDDGIRRILIRSPESGAAVPAGVEVIRIGASGRTLAPSDIVGALYSAGISTMLIEGGAWTVSQFIDDGAVDRLHVMVAPMLLGSGKTGLELRPIARLADARRPHTNVHVLPDGDVLFDCNLRTN 672
D + P+R+AP R FV+AQLGQSLDGRIAT TGES+WIN +CALDH+H LRA VDAVVVGVGTV+ADDP L VRRV GR P RVVIDPSGR P A+ NDDG+ R ++R+ E A P GVE I + +P IV AL++ G+ +LIEGGA TVS FI AVDRLH++VAP++LGSGK G+ L PIA+L+DA RP T VHVL DGDVLFDC+LR++
Sbjct: 14 DVFAPLRHAPPNRPFVVAQLGQSLDGRIATATGESQWINHNCALDHLHGLRAHVDAVVVGVGTVLADDPRLNVRRVPGRSPARVVIDPSGRLPPGAKCLNDDGVARFVVRACEIPA--PDGVETIHVPRGTDHFSPQTIVDALFARGLRRLLIEGGAMTVSSFIAARAVDRLHMLVAPVILGSGKPGVVLPPIAKLSDALRPVTRVHVLADGDVLFDCDLRSD 234
BLAST of mRNA_P-wetherbeei_contig14932.1.1 vs. uniprot
Match: A0A849TGF9_9HYPH (RibD family protein n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A849TGF9_9HYPH) HSP 1 Score: 266 bits (681), Expect = 4.100e-87 Identity = 144/222 (64.86%), Postives = 171/222 (77.03%), Query Frame = 1
Query: 16 PVRNAPAGRAFVIAQLGQSLDGRIATPTGESRWINQSCALDHVHRLRAAVDAVVVGVGTVVADDPLLTVRRVEGRHPVRVVIDPSGRCPSTARVFND-DGIRRILIRSPE-SGAAVPAGVEVIRI--GASGRTLAPSDIVGALYSAGISTMLIEGGAWTVSQFIDDGAVDRLHVMVAPMLLGSGKTGLELRPIARLADARRPHTNVHVLPDGDVLFDCNLRT 669
P+ NAPAG FVIAQLGQSLDGRIATPTGESRWIN+ ALDHVHRLRA VDAVVVG+GT +ADDP+L VRRVEGR+P RV+IDP GR + R D DG RRI+IRS + S ++PAGVE++ + G+ L P IV AL + G+ +LIEGGAWTVS+FI AVDRLHV+VAP++LGSGKTGL L I +L++A RP T V L DGDVLFDC+LRT
Sbjct: 17 PLINAPAGHPFVIAQLGQSLDGRIATPTGESRWINKDAALDHVHRLRAHVDAVVVGIGTALADDPMLNVRRVEGRNPARVIIDPRGRLHADRRCLQDGDGCRRIVIRSTDTSSPSLPAGVEILALPPDTDGK-LNPVAIVDALTAHGLPKLLIEGGAWTVSEFIAARAVDRLHVLVAPLILGSGKTGLALPTIDKLSEAIRPATRVFPLADGDVLFDCDLRT 237
BLAST of mRNA_P-wetherbeei_contig14932.1.1 vs. uniprot
Match: A0A1E4CT39_9HYPH (Deaminase n=2 Tax=unclassified Hyphomicrobium TaxID=2619925 RepID=A0A1E4CT39_9HYPH) HSP 1 Score: 264 bits (675), Expect = 2.740e-86 Identity = 138/222 (62.16%), Postives = 168/222 (75.68%), Query Frame = 1
Query: 7 PYVPVRNAPAGRAFVIAQLGQSLDGRIATPTGESRWINQSCALDHVHRLRAAVDAVVVGVGTVVADDPLLTVRRVEGRHPVRVVIDPSGRCPSTAR-VFNDDGIRRILIRSPESGAAVPAGVEVIRIGASGRTLAPSDIVGALYSAGISTMLIEGGAWTVSQFIDDGAVDRLHVMVAPMLLGSGKTGLELRPIARLADARRPHTNVHVLPDGDVLFDCNLRT 669
P + +AP R FV+AQLGQSLDGRIA +GESRWIN AL HVHR+RAAVDAVVVGVGTV ADDP+L VR V GR+P RVVIDP+GR P AR + +DG RR+++R+ S +P GVE +RI ++ L P+ IV L+ G+ +MLIEGGA TVS F+ GA+DRLHV+VAP++LGSGK GL L PIARLADA RP +VHVL DGDVLFDC+LR+
Sbjct: 16 PIARILSAPRDRPFVVAQLGQSLDGRIAIESGESRWINAQSALTHVHRVRAAVDAVVVGVGTVAADDPMLNVRHVPGRNPARVVIDPNGRLPQAARCLLGEDGCRRVIVRAGNS--PLPQGVEELRIESNAGRLCPNAIVDGLFRLGLRSMLIEGGAHTVSAFLAAGALDRLHVLVAPVILGSGKPGLLLPPIARLADALRPPADVHVLDDGDVLFDCDLRS 235
BLAST of mRNA_P-wetherbeei_contig14932.1.1 vs. uniprot
Match: A0A433A5Q4_HYPSQ (RibD family protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A433A5Q4_HYPSQ) HSP 1 Score: 263 bits (671), Expect = 1.040e-85 Identity = 135/224 (60.27%), Postives = 162/224 (72.32%), Query Frame = 1
Query: 10 YVPVRNAPAGRAFVIAQLGQSLDGRIATPTGESRWINQSCALDHVHRLRAAVDAVVVGVGTVVADDPLLTVRRVEGRHPVRVVIDPSGRCPSTARVFNDDGIRRILIRSPESGAAVPAGVEVIRIGASGRTLAPSDIVGALYSAGISTMLIEGGAWTVSQFIDDGAVDRLHVMVAPMLLGSGKTGLELRPIARLADARRPHTNVHVLPDGDVLFDCNLRTNWEG 681
+ P+ NAPA R FV+AQLGQSLDGRIAT +GESRWIN ALDH+HRLRA+VDAVVVG+GTV+ADDP LTVRRV G PVRV+IDP GR PS+AR +++ + E P G E++ + G LAPSDIVGAL++ G+ +L+EGGA TVS FI GAVDRLH++VAPM+LGSG GL L PI L A RP T VH+L GDVLFDC+LR G
Sbjct: 12 FQPIMNAPADRPFVLAQLGQSLDGRIATASGESRWINGPSALDHLHRLRASVDAVVVGIGTVLADDPRLTVRRVAGAEPVRVIIDPRGRLPSSARCLTTGNQPCLIVTNRERDP--PEGAELMLVKGEGERLAPSDIVGALFARGLKRILVEGGASTVSDFIGSGAVDRLHLLVAPMILGSGIPGLTLSPIGNLDQALRPETRVHILDGGDVLFDCDLRHERRG 233
BLAST of mRNA_P-wetherbeei_contig14932.1.1 vs. uniprot
Match: UPI001FE01425 (RibD family protein n=1 Tax=Aquabacter cavernae TaxID=2496029 RepID=UPI001FE01425) HSP 1 Score: 260 bits (664), Expect = 1.280e-84 Identity = 133/213 (62.44%), Postives = 169/213 (79.34%), Query Frame = 1
Query: 34 AGRAFVIAQLGQSLDGRIATPTGESRWINQSCALDHVHRLRAAVDAVVVGVGTVVADDPLLTVRRVEGRHPVRVVIDPSGRCPSTARVFNDDGIRRILIRSPESGAAVPAGVEVIRI--GASGRTLAPSDIVGALYSAGISTMLIEGGAWTVSQFIDDGAVDRLHVMVAPMLLGSGKTGLELRPIARLADARRPHTNVHVLPDGDVLFDCNLR 666
+ R+ VI QLGQSLDGR+AT +GES++I+ SCALDH+HRLRAAVDAV+VGVGTVVADDPLLTVRRVEGR P RVVIDPSGR AR DDG RR ++R+P +G+ +P GVEV+ + A GR +AP I+ AL +AG+S +L+EGG T++ FI+ G +DRLHV+V+P++LGSG+TGL+L PIA L DA RP V + PDGDVLFDC++R
Sbjct: 4 SARSLVIGQLGQSLDGRVATLSGESKYISGSCALDHLHRLRAAVDAVLVGVGTVVADDPLLTVRRVEGRSPARVVIDPSGRVDPDARCLADDGARRFVVRTPAAGSTLPPGVEVLVVCPDAQGR-IAPRAILSALAAAGLSRILVEGGPATLAAFIEAGLLDRLHVVVSPVILGSGRTGLDLTPIAGLGDALRPPACVTLFPDGDVLFDCDMR 215 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14932.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14932.1.1 >prot_P-wetherbeei_contig14932.1.1 ID=prot_P-wetherbeei_contig14932.1.1|Name=mRNA_P-wetherbeei_contig14932.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=231bp PDPYVPVRNAPAGRAFVIAQLGQSLDGRIATPTGESRWINQSCALDHVHRback to top mRNA from alignment at P-wetherbeei_contig14932:499..1191+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14932.1.1 ID=mRNA_P-wetherbeei_contig14932.1.1|Name=mRNA_P-wetherbeei_contig14932.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=693bp|location=Sequence derived from alignment at P-wetherbeei_contig14932:499..1191+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14932:499..1191+ >mRNA_P-wetherbeei_contig14932.1.1 ID=mRNA_P-wetherbeei_contig14932.1.1|Name=mRNA_P-wetherbeei_contig14932.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=693bp|location=Sequence derived from alignment at P-wetherbeei_contig14932:499..1191+ (Phaeothamnion wetherbeei SAG_119_79)back to top |