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Homology
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR001680 | WD40 repeat | SMART | SM00320 | WD40_4 | coord: 214..257
e-value: 2.0E-5
score: 34.0
coord: 406..448
e-value: 48.0
score: 6.4
coord: 109..147
e-value: 38.0
score: 7.0
coord: 357..401
e-value: 0.0024
score: 27.1
coord: 63..103
e-value: 0.11
score: 21.5
coord: 315..354
e-value: 7.9E-10
score: 48.6
coord: 154..192
e-value: 2.5E-4
score: 30.4 |
| IPR001680 | WD40 repeat | PFAM | PF00400 | WD40 | coord: 167..191
e-value: 2.6E-4
score: 21.7
coord: 227..256
e-value: 4.9E-5
score: 24.0
coord: 73..102
e-value: 0.18
score: 12.7
coord: 318..353
e-value: 5.6E-8
score: 33.3 |
| IPR001680 | WD40 repeat | PROSITE | PS50082 | WD_REPEATS_2 | coord: 322..363
score: 15.487762 |
| IPR001680 | WD40 repeat | PROSITE | PS50082 | WD_REPEATS_2 | coord: 167..193
score: 9.071468 |
| IPR001680 | WD40 repeat | PROSITE | PS50082 | WD_REPEATS_2 | coord: 225..256
score: 12.981398 |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | GENE3D | 2.130.10.10 | | coord: 44..285
e-value: 1.1E-31
score: 112.0 |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | GENE3D | 2.130.10.10 | | coord: 297..457
e-value: 8.3E-24
score: 86.1 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..51 |
| None | No IPR available | PANTHER | PTHR44129 | FAMILY NOT NAMED | coord: 123..449
coord: 73..261 |
| None | No IPR available | PROSITE | PS50294 | WD_REPEATS_REGION | coord: 225..256
score: 10.785595 |
| None | No IPR available | PROSITE | PS50294 | WD_REPEATS_REGION | coord: 322..353
score: 12.235586 |
| IPR036322 | WD40-repeat-containing domain superfamily | SUPERFAMILY | 50978 | WD40 repeat-like | coord: 69..440 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-wetherbeei_contig1492.1.1 ID=prot_P-wetherbeei_contig1492.1.1|Name=mRNA_P-wetherbeei_contig1492.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=471bp
MRHAPPPRKKGASGRVVVVAPASDDNAVPPASPQAAAAGGPTAAKEAGFQ
QAADCQHEHGFSKFEPTTMWISAHGEGALWACISARGNYLASCGADGTAV
IWYVRSANRGFIRLVLPPPPRDVVQCTFSPDEEHLVVASGDVLTVWLSSK
GILRHTILVPLTPNAALTGVDWSPDGSTLASCSSDAHVCIWGLHEALRRG
GRITSSSAGAAAPDGALLADLSLEENAHTQWVTRVAFAPNGKSLLTCSQD
KAVKLWVSLDQTGGISSVGRNGDGIDGIGSIGRNAGGGGIGSIGRNAGGG
GIGSIGRNAGGGSRPCRHLCTYRGHRDSVTSVAWNSQSTLFASGSADRTV
VVWRPSSTEPLHVLRGGHQLEIGCVCFCHHSTASAGCLVSCGRDRYMCFF
DVTSTKAKLREQIPTGSDRRTTCVSFHTTETALVTASAGKEASLLLWRPC
SSWLVWWRRLIALWRGIWFD* back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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