mRNA_P-wetherbeei_contig149.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig149.2.1
Unique NamemRNA_P-wetherbeei_contig149.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig149.2.1 vs. uniprot
Match: A0A835YW60_9STRA (Ferric oxidoreductase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW60_9STRA)

HSP 1 Score: 149 bits (375), Expect = 5.820e-33
Identity = 111/397 (27.96%), Postives = 168/397 (42.32%), Query Frame = 1 
Query:  259 PLFAAVFTGALYEALWLRNYVRERHM-------------QKELEKGGDGGCNVSWTLLAPLR-VQIKVPLFG-CWATTGELLLFLLWNVMHVSILWNGVSASLRYFSEATAH---CPGDEQGPLCWDYSSCFPSSTSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTGPCAESGSRLDYALQSVALRLGYNAVAALCFVFLPVARDSRLLAGLGIPAQRAVVYHRVIGHYFMWALFGHGFMYVVWWGKTGGMHKIWNES--FSSPNDAY------------------------ISVRAGWLAFLVGVPAWLATLEVVRRRRYPAFKTLHWLNIPVLCLSAVHWPYLSMYIFGGVIIYAVHVVSRLSSWQRWRASWRLAAAP 1317
            P++  V  GALYE     ++V++R                  L+K       ++  L A  R + IKV +    WA+ GEL +F  W V HV+  W    A+ ++  +   +   CP D     CW+Y      +                                                     + +   Y L   AL +G+ A   L  V LPV+R SRL A L +P +RAV+YH++IGH F W +  H F+  V+W    G   +W+ES  +   +D+Y                        IS+ AGW+A L GVP W+ +   VRR  Y  FK +HW+ +PVL  S +H+  ++ ++   V +YA H+ +RL+SWQRWR  W+    P
Sbjct:   77 PVYFLVIAGALYET----SFVKQRRSWLLSVGSTGTPQGATNLKKSESHPSRIAAVLAAVRRLITIKVKIASDTWASFGELTVFAAWVVSHVTGTW----AATKWAEDLPDYIEPCPFDVT-KTCWNYIDSGADAPEL--------------------------------------------------APNMAQYKLYMAALGIGFLATTDLALVLLPVSRTSRLWAALDVPFERAVLYHKIIGHTFFWDVVLHAFLCCVYWIWFQGWDYMWSESVTWDGSSDSYRHSRSVLERQAPDVVTEPLDGVKHISIPAGWMALLFGVPLWITSTGYVRRHWYSLFKAVHWMCVPVLYFSVMHYYGVAAFLIAPVGLYAAHIATRLASWQRWRL-WQRWTGP 413
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BLAST of mRNA_P-wetherbeei_contig149.2.1 vs. uniprot
Match: D7FK19_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK19_ECTSI)

HSP 1 Score: 132 bits (333), Expect = 2.210e-28
Identity = 101/348 (29.02%), Postives = 144/348 (41.38%), Query Frame = 1 
Query:  259 PLFAAVFTGALYEALWLRNYVRERHMQKELEKGGDGGCNVSWTLLAPLRVQIKVPL---FGCWATTGELLLFLLWNVMHVSILWNGVSASLRYFSEATAHCPGDEQGPLCWDYSSCFPSSTSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTGPCAESGSRLDYALQSVALRLGYNAVAALCFVFLPVARDSRLLAGLGIPAQRAVVYHRVIGHYFMWALFGHGFMYVVWWGKTGGMHKIWNESFSSPNDAY---ISVRAGWLAFLVGVPAWLATLEVVRRRRYPAFKTLHWLNIPVLCLSAVHWPYLSMYIFGGVIIYAVHVVSRLSSWQR 1284
            P+  A   G +YEALWL    RE       E    GG     T+ + +  Q + PL   +  W T GE     LW  + VS L  GV A  R   E+   C  D   P  W  S                                                      GP         + L  VA   GY   +    + +PVARDS++ + LG+P +RAV+YH   GH     +  H F++VV+W    G      ES  +P + +   + +  GW+A L G+P W+ ++  VRRR Y  FK  H+L I V    A+HW   ++Y  GG+ +Y +H++SRL SW+R
Sbjct:   79 PIILAAALGGVYEALWLS---REAKAGDAAEASKAGGFLA--TIHSIMHCQFR-PLGSSYFPWLTVGEAAAMFLWICVMVSELTQGVLA--REHGESYVVCEDD---PTDWCSSR------------------------------------------------DGTPGGPTPNQ-----WMLFRVATYFGYICSSHFAVILVPVARDSKIWSSLGVPYERAVLYHTFAGHLAFTTMAVHAFLFVVYWVWYDGWAHAIRESIHAPAEKHHHGLDIPMGWMALLCGLPMWITSINFVRRRYYSLFKLAHFLFIGVFVFGAMHWSRNTLYYLGGLTLYTLHIMSRLESWKR 362
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BLAST of mRNA_P-wetherbeei_contig149.2.1 vs. uniprot
Match: D7G5Y8_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D7G5Y8_ECTSI)

HSP 1 Score: 130 bits (328), Expect = 2.940e-27
Identity = 92/348 (26.44%), Postives = 137/348 (39.37%), Query Frame = 1 
Query:  256 LPLFAAVFTGALYEALWLRNYVRERHMQKELEKGG---DGGCNVSWTLLAPLRVQIKVPL--FGCWATTGELLLFLLWNVMHVSILWNGVSASLRYFSEATAHCPGDEQGPLCWDYSSCFPSSTSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTGPCAESGSRLDYALQSVALRLGYNAVAALCFVFLPVARDSRLLAGLGIPAQRAVVYHRVIGHYFMWALFGHGFMYVVWWGKTGGMHKIWNES--FSSPNDAYISVRAGWLAFLVGVPAWLATLEVVRRRRYPAFKTLHWLNIPVLCLSAVHWPYLSMYIFGGVIIYAVHVVSRLSSW 1278
            LP+      G +YEALW R  +R      +    G   D    +     + +  Q + PL  +  W T GE  +  LW +   S  W GV     +F +    CP D   P  W     F S                                                 GP         Y L+ + + +G    +    + +PV+RDS++ + LG+P +RAV+YH + GH    +LF H  +    W +  G     +ES  F       +    GW+A L  +P W  ++  VRR+ Y  FK  HWL I V   S +HW   ++Y  GG+ +Y +HV+SRL SW
Sbjct:   79 LPIILTAALGGVYEALWKRREIRSTQEHPDSAAAGEEEDSKPGILAFFHSVVHYQYR-PLGQYSPWLTVGETTVLTLWLLAMGSQCWQGVLNHGNHFHDIYMVCPDD---PTQWCNQFSFESG------------------------------------------------GPTPNQ-----YRLRMIGIFMGLVCSSHFAIILVPVSRDSKIWSALGVPFERAVLYHAIAGHLAFTSLFFHALLLTAHWVQYEGWSHAVHESIHFDPNTHGGVDTPMGWMAGLCAIPMWATSVNWVRRKYYSLFKLAHWLFIGVFVFSVMHWAPNALYFLGGLTLYIMHVLSRLESW 369
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BLAST of mRNA_P-wetherbeei_contig149.2.1 vs. uniprot
Match: A0A6H5KAK2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAK2_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 5.200e-27
Identity = 57/147 (38.78%), Postives = 87/147 (59.18%), Query Frame = 1 
Query:  856 PVARDSRLLAGLGIPAQRAVVYHRVIGHYFMWALFGHGFMYVVWWGKTGGMHKIWNESFSSPNDAY---ISVRAGWLAFLVGVPAWLATLEVVRRRRYPAFKTLHWLNIPVLCLSAVHWPYLSMYIFGGVIIYAVHVVSRLSSWQRW 1287
            P ARDS++ + LG+P +RAV+YH   GH     +  H F++VV+W    G      ES  +P + +   + +  GW+A L G+P W+ ++  VRRR Y  FK  H+L I V    A+HW   ++Y  GG+ +Y +H++SRL SW+RW
Sbjct:  124 PAARDSKIWSSLGVPYERAVLYHTFAGHLAFTTMAVHAFLFVVYWVWYDGWAHAIRESIHAPAEKHHHGLDIPMGWMALLCGLPMWITSINFVRRRYYSLFKLAHFLFIGVFVFGAMHWSRNTLYYLGGLTLYTLHIMSRLESWKRW 270
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BLAST of mRNA_P-wetherbeei_contig149.2.1 vs. uniprot
Match: D7FGP2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGP2_ECTSI)

HSP 1 Score: 122 bits (305), Expect = 9.960e-25
Identity = 68/168 (40.48%), Postives = 95/168 (56.55%), Query Frame = 2 
Query: 1484 GSFFAYLSSPGIYGTFEAHPISVALRGAPPSLAEDIYVTGGGSG------DQIFTVYIKVVGDWSAMLARMVQAGGSVGRSPHLLVDIDGFYGA--SVESISTSGGAECILLVAGGSGATPFLCMLQEWFAAVDRGLRVPSVHFVWASRSVEEFEVVGEFLWARLAAA 1963
            G  F Y+S P   GT EAH I+VALRGAPPS +    ++ G +       + +FTVYIK +G W+  L    +   + G +  LLVD+DGFY    S  S+  +GG   +++VAGGSG T  +  +Q+W  A   G  VP V+  W  R + E E+VGE L + LA+A
Sbjct:  265 GGSFVYISVPAALGTDEAHAITVALRGAPPSFSHAAKLSSGRNSAAQEDENDVFTVYIKDLGKWTKTLKDTARGAEAAGDARSLLVDVDGFYTQVQSFSSMKVAGGTSRVMVVAGGSGMTSLMGFIQDWAVAAREGADVPEVNLAWCCRYMSEMELVGECLPSVLASA 432
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BLAST of mRNA_P-wetherbeei_contig149.2.1 vs. uniprot
Match: D7G8Y6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Y6_ECTSI)

HSP 1 Score: 120 bits (300), Expect = 3.610e-24
Identity = 57/166 (34.34%), Postives = 90/166 (54.22%), Query Frame = 1 
Query:  787 YALQSVALRLGYNAVAALCFVFLPVARDSRLLAGLGIPAQRAVVYHRVIGHYFMWALFGHGFMYVVWWGKTGGMHKIWNES--FSSPNDAYISVRAGWLAFLVGVPAWLATLEVVRRRRYPAFKTLHWLNIPVLCLSAVHWPYLSMYIFGGVIIYAVHVVSRLSSW 1278
            Y L+ + + +G    +    + +PV+RDS++ + LG+P +RAV+YH + GH    +LF H  +    W +  G     +ES  F       + +  GW+A L  +P W  ++  VRR+ Y  FK  HWL I V   S +HW   ++Y  GG+ +Y +HV+SRL SW
Sbjct:   73 YRLRMIGIFMGLVCSSHFAIILVPVSRDSKIWSALGVPFERAVLYHAIAGHLAFTSLFFHALLLTAHWVQYEGWSHAVHESIHFDPNTHGGVDIPMGWMAGLCAIPMWATSVNWVRRKYYSLFKLAHWLFIGVFVFSVMHWAPNALYFLGGLTLYIMHVLSRLESW 238
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BLAST of mRNA_P-wetherbeei_contig149.2.1 vs. uniprot
Match: D7G4X0_ECTSI (Ferric chelate reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4X0_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 1.290e-23
Identity = 74/177 (41.81%), Postives = 100/177 (56.50%), Query Frame = 2 
Query: 1439 LVLQTPAASPALPPAGSFFAYLSSPGIYGTFEAHPISVALRGAPPSLAEDIYVTGGGSGDQIFTVYIKVVGDWSAMLARMVQAGGSVGRSPHLLVDIDGFYGA--SVESISTSGGAECILLVAGGSGATPFLCMLQEWFAAVDRGLRVPSVHFVWASRSVEEFEVVGEFLWARLAAA 1963
            LVL+ P  S   P  G  F Y+S P + GT EAHP+SVALRGAPP L            D +FT+YIK +G W+  L +          S +L V +DG YG   S+ S+  +G  + ++L AGGSG T F  ++Q+W  A   G  VP+VH VW+ R + E E++GE L + LAAA
Sbjct:  226 LVLRNP--SNHSPAKGGTFVYISVPALLGTIEAHPMSVALRGAPPHLWN------ASLDDGVFTLYIKTMGSWTLALQKQ--------ESDNLTVHVDGLYGGAPSLASMKQAGFPK-VVLFAGGSGVTSFTALIQDWCEAYSGGEDVPAVHLVWSCRRMSEIELLGEALPSFLAAA 385
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BLAST of mRNA_P-wetherbeei_contig149.2.1 vs. uniprot
Match: A0A6H5KRK1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRK1_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 1.850e-23
Identity = 72/176 (40.91%), Postives = 97/176 (55.11%), Query Frame = 2 
Query: 1439 LVLQTPAASPALPPAGSFFAYLSSPGIYGTFEAHPISVALRGAPPSLAEDIYVTGGGSGDQIFTVYIKVVGDWSAMLARMVQAGGSVGRSPHLLVDIDGFYGASVESISTS-GGAECILLVAGGSGATPFLCMLQEWFAAVDRGLRVPSVHFVWASRSVEEFEVVGEFLWARLAAA 1963
            LVL+ P  S   P  G  F Y+S P + GT EAHP+SVALRGAPP L    +       D +FT+Y+K +G W+  L +          S  L V +DG YG +    S    G   ++L AGGSG T F  ++Q+W  A   G  VP+VH VW+ RS+ E E++GE + + LAAA
Sbjct:  380 LVLRNP--SNHSPAKGGAFVYISVPALLGTIEAHPMSVALRGAPPHLWNAAF------DDGVFTLYVKTMGSWTLALQKQ--------ESDDLTVHVDGLYGGAPSLASMKQAGFPRVVLFAGGSGVTSFTTLIQDWCEAYSGGEDVPAVHLVWSCRSMSEIELLGEAIPSFLAAA 539
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BLAST of mRNA_P-wetherbeei_contig149.2.1 vs. uniprot
Match: A0A835ZAT9_9STRA (Ferric oxidoreductase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAT9_9STRA)

HSP 1 Score: 118 bits (295), Expect = 3.230e-23
Identity = 66/167 (39.52%), Postives = 90/167 (53.89%), Query Frame = 1 
Query:  775 SRLDYALQSVALRLGYNAVAALCFVFLPVARDSRLLAGLGIPAQRAVVYHRVIGHYFMWALFGHGFMYVVWWGKTGGM---HKIWNESFSSPNDAY-------ISVRAGWLAFLVGVPAWLATLEVVRRRRYPAFKTLHWLNIPVLCLSAVHWPYLSMYIFGGVIIY 1245
            S+  Y L   A+ LG+ A + L  V LP +R SRL  GLG+P +RA+ YH +IGH F   +  H  M+VV+W    G    HK   ++  +  + +       +S+ AGW A  VG P WLA+   VRRR Y AFK LHWL +P+L  +  HWP       GG  +Y
Sbjct:  194 SQSQYQLSRAAIALGFVAASDLMLVLLPASRTSRLWVGLGVPFERAIWYHTIIGHAFFCHIVLHAAMFVVYWLWFEGACWHHKA--DTLLTEIEVHHVFAMQDVSIPAGWTALAVGAPMWLASTAYVRRRCYSAFKALHWLALPLLYFAVTHWP-------GGSFVY 351
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BLAST of mRNA_P-wetherbeei_contig149.2.1 vs. uniprot
Match: D8LNK5_ECTSI (Ferric reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNK5_ECTSI)

HSP 1 Score: 117 bits (292), Expect = 5.070e-23
Identity = 62/163 (38.04%), Postives = 88/163 (53.99%), Query Frame = 1 
Query:  793 LQSVALRLGYNAVAALCFVFLPVARDSRLLAGLGIPAQRAVVYHRVIGHYFMWALFGHGFMYV---VWWGKTGGMHKIWNESFSSPNDAY--ISVRAGWLAFLVGVPAWLATLEVVRRRRYPAFKTLHWLNIPVLCLSAVHWPYLSMYIFGGVIIYAVHVVSR 1266
            L  +A   G+ A      + +PVARDS+L + +GIP +RAV+YH + GH     +F H F+++   VW     G    W  S    ND Y  + V  GW A L  +P W+ ++  VRRR Y  FK  HWL I V    A+HW   ++Y  GG+ +Y +HV+SR
Sbjct:  144 LSVIAAYFGFAASCHFAVILIPVARDSKLWSAVGIPFERAVLYHVIAGHLAFATMFLHAFLFLSSCVW---ENGWRHAWEVSTLQANDDYGDVDVPMGWAAGLCALPMWITSVNYVRRRWYSLFKASHWLFIGVFIFGALHWDTNAIYFGGGLALYIMHVMSR 303
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig149.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A835YW60_9STRA5.820e-3327.96Ferric oxidoreductase domain-containing protein n=... [more]
D7FK19_ECTSI2.210e-2829.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G5Y8_ECTSI2.940e-2726.44Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KAK2_9PHAE5.200e-2738.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FGP2_ECTSI9.960e-2540.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G8Y6_ECTSI3.610e-2434.34Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7G4X0_ECTSI1.290e-2341.81Ferric chelate reductase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KRK1_9PHAE1.850e-2340.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZAT9_9STRA3.230e-2339.52Ferric oxidoreductase domain-containing protein n=... [more]
D8LNK5_ECTSI5.070e-2338.04Ferric reductase n=1 Tax=Ectocarpus siliculosus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig149contigP-wetherbeei_contig149:5536..9347 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G5M5
Preferred nameAIM14
PFAMsFAD_binding_8,Ferric_reduct,NAD_binding_6
Model size3301
Max annot lvl2759|Eukaryota
KEGG koko:K00521
Hectar predicted targeting categorymitochondrion
GOsGO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005783,GO:0006873,GO:0006875,GO:0006915,GO:0008150,GO:0008152,GO:0008219,GO:0009987,GO:0012501,GO:0012505,GO:0016020,GO:0016021,GO:0016175,GO:0016491,GO:0016651,GO:0016722,GO:0019725,GO:0030003,GO:0031090,GO:0031224,GO:0032956,GO:0032970,GO:0033043,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0048471,GO:0048878,GO:0050664,GO:0050789,GO:0050794,GO:0050801,GO:0051128,GO:0051493,GO:0055065,GO:0055080,GO:0055082,GO:0055114,GO:0065007,GO:0065008,GO:0097038,GO:0098588,GO:0098771,GO:0098805,GO:0098852
Exons3
Evalue3.3e-29
EggNOG OGsKOG0039@1|root,KOG0039@2759|Eukaryota
EC1.16.1.7
Descriptionoxidoreductase activity, acting on NAD(P)H, oxygen as acceptor
Cds size2436
COG categoryC
BRITEko00000,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186036.9273221-UTR-P-wetherbeei_contig149:5535..58981683186036.9273221-UTR-P-wetherbeei_contig149:5535..5898Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig149 5536..5898 -
1683186036.9536228-UTR-P-wetherbeei_contig149:8366..84341683186036.9536228-UTR-P-wetherbeei_contig149:8366..8434Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig149 8367..8434 -
1683186036.961828-UTR-P-wetherbeei_contig149:8913..93471683186036.961828-UTR-P-wetherbeei_contig149:8913..9347Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig149 8914..9347 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186036.9371297-CDS-P-wetherbeei_contig149:5898..75161683186036.9371297-CDS-P-wetherbeei_contig149:5898..7516Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig149 5899..7516 -
1683186036.9453304-CDS-P-wetherbeei_contig149:7548..83661683186036.9453304-CDS-P-wetherbeei_contig149:7548..8366Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig149 7549..8366 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig149.2.1prot_P-wetherbeei_contig149.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig149 5899..8366 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig149.2.1

>prot_P-wetherbeei_contig149.2.1 ID=prot_P-wetherbeei_contig149.2.1|Name=mRNA_P-wetherbeei_contig149.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=812bp
MAFPRPFVTFLRPRLTAQAMNRAPFAGTTRRAFQAAHRLPVTPVTPATPA
TPATPATPATPATPVTPATPTTRTTPTRVRRPPRGRAPNQARDWTTPSSR
WPCGSATTLWPRCASSSCPSRETADCLPASASPHSARSCTTASSATTSCG
RSSAMASCTSSGGGKLVACIKFGTSRSPHRTTPTSVFAPAGWRSWSACRR
GWPPLRSYDAGGIQRSRRCTGSTSLYFASPQSTGRTSACTSLAVSSSMQF
TSCHVSLPGSAGALRGGWQPPRRSSEEDSGALDATADGSSRSAPAFAFAT
VLQAKTVGSVVTLVLQTPAASPALPPAGSFFAYLSSPGIYGTFEAHPISV
ALRGAPPSLAEDIYVTGGGSGDQIFTVYIKVVGDWSAMLARMVQAGGSVG
RSPHLLVDIDGFYGASVESISTSGGAECILLVAGGSGATPFLCMLQEWFA
AVDRGLRVPSVHFVWASRSVEEFEVVGEFLWARLAAAVTEEGFCPRGDLE
VSLFLTGGPTAVVLASADGAAEEAGLPAHGVRYSGVGPTSLRGGGGLATL
ARTNGTTAAVAAAAVEEMQRFAPQRAVTTTDGGSDRRGHGAPAWWASISS
GIETVLAGGAAYAGHVAAMCEIQRRDLAFWRRGMIDIILIILFAVFMVLL
WRTAECAVTFAYCSVAARSRARVKEPIVGGRDAVSPTMLPRSANVRPDGG
STGIGNKNNDEGKAQERATGEAPIESDAAVAGWSGQHLQDGRHVSLTVLP
SIGRPDIPALLLREAAAAAAAGRRRIGIKVSGPRGLIDDVLRSAKAMDCS
MYHAEAVSFQF*
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mRNA from alignment at P-wetherbeei_contig149:5536..9347-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig149.2.1 ID=mRNA_P-wetherbeei_contig149.2.1|Name=mRNA_P-wetherbeei_contig149.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3812bp|location=Sequence derived from alignment at P-wetherbeei_contig149:5536..9347- (Phaeothamnion wetherbeei SAG_119_79)
GAGCCGCGCGGCGCAAGGAACTAGTGCGTGACGGCCATGGAGCTCATTCT
GGCCGGCCTTCGCGGCCTCACGCTGTCGTTGGTCGGGGCGTCGCTTTTCT
TTTATGCGATCTGGTTAACGAAGTTCTTTGGGGACAAAATCGTCGCCAAG
GCGATGCCTTCATGGTCCATCGGGATGTTCACGGATTCGAGCAGCAGCAG
CAGCAGCAGTCACACTATCTACGCGGTCGACAATGTGGCCGCCGCGATGG
GGCAGCTTCCTCTGTTTGCCGCGGTGTTCACTGGTGCGCTGTACGAGGCG
TTGTGGCTCCGCAATTACGTGCGAGAGAGGCACATGCAAAAGGAACTCGA
AAAAGGCGGCGACGGTGGTTGCAATGTGTCGTGGACCCTGCTAGCGCCGC
TGCGCGTGCAGATCAAGGTACCCCTTTTCGGATGGTGAGTGTAAAACAAG
AGAGCCCCTGATCCGTTTTCCGTTAGATTGATAAAACCTTTATTTTTTTG
ACATTTCAAACATTCCCTCTTGACGGCTGACGCACGTGCGCGCTTGTAGC
TCGTTGCTGAATGCCGCATGTGAGAACGCTAGGTGTGCAGGCATGCGCTT
GGTATCATTTGAATGCGCCTCTGACTCGCCATAGCACATCGCATCCCATC
GCACCCTCCAAAAACCCGCACGACTTCCTCTTTCTCGCACCGTTCATTGG
TTTCTGTGCACATCTTTGTGGACTTTTGCTTTTGGGGGGGGGGGGGGGGG
GGCCTCAAAAGCGTTGCCCCGTTGGTGGCAGGTGGGGGAGGCAGGGGGGG
GGTGTGTTGTTTTNNNNNNNNNNGCTGCTTTCGTGTGTTCTTTGGTGTGT
GGTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCTCAACGACAATGGCCG
CCGCTGTGGCCAGCTGGGCAACGACGGGAGAGCTGCTGTTGTTTCTGCTA
TGGAACGTCATGCACGTGTCAATATTGTGGAATGGCGTTTCCGCGTCCCT
TCGTTACTTTTCTGAGGCCACGGCTCACTGCCCAGGCGATGAACAGGGCC
CCCTTTGCTGGGACTACTCGTCGTGCTTTCCAAGCAGCACATCGACTACC
AGTCACTCCGGTCACACCAGCCACACCAGCCACACCAGCCACACCAGCCA
CACCAGCCACTCCAGCCACTCCAGTCACTCCAGCCACTCCTACTACTCGT
ACTACTCCTACTCGAGTTCGTCGTCCACCACGGGGCCGTGCGCCGAATCA
GGCTCGAGACTGGACTACGCCCTCCAGTCGGTGGCCCTGCGGCTCGGCTA
CAACGCTGTGGCCGCGCTGTGCTTCGTCTTCTTGCCCGTCGCGCGAGACA
GCCGACTGCTTGCCGGCCTCGGCATCCCCGCACAGCGCGCGGTCGTGTAC
CACCGCGTCATCGGCCACTACTTCATGTGGGCGCTCTTCGGCCATGGCTT
CATGTACGTCGTCTGGTGGGGGAAAACTGGTGGCATGCATAAAATTTGGA
ACGAGTCGTTCTCCTCACCGAACGACGCCTACATCAGTGTTCGCGCCGGC
TGGCTGGCGTTCCTGGTCGGCGTGCCGGCGTGGCTGGCCACCCTTGAGGT
CGTACGACGCCGGCGGTATCCAGCGTTCAAGACGCTGCACTGGCTCAACA
TCCCTGTACTTTGCCTCTCCGCAGTCCACTGGCCGTACCTCAGCATGTAC
ATCTTTGGCGGTGTCATCATCTATGCAGTTCACGTCGTGTCACGTCTCTC
TTCCTGGCAGCGCTGGCGCGCTTCGTGGCGGCTGGCAGCCGCCCCGCCGG
TGCCGGGCTGCCGTTCGCCGGCGCCGTGGAGGAGCAGTGAGGAGGACTCC
GGCGCCCTCGACGCGACGGCAGACGGCAGCAGCAGATCGGCGCCCGCGTT
TGCATTCGCGACGGTCCTGCAAGCGAAGACTGTGGGGTCGGTTGTCACGC
TTGTGCTGCAAACGCCGGCTGCTTCGCCGGCTCTGCCTCCAGCCGGCAGC
TTCTTTGCCTACCTGAGCTCGCCGGGCATCTACGGCACCTTCGAGGCGCA
CCCAATCAGCGTGGCGCTCCGTGGGGCGCCCCCATCGCTTGCGGAAGATA
TCTACGTGACTGGCGGCGGCAGCGGTGACCAAATCTTCACCGTGTACATC
AAAGTCGTCGGAGACTGGTCGGCCATGCTTGCGCGAATGGTGCAGGCCGG
GGGGAGCGTGGGCCGGTCTCCTCACCTCTTGGTGGACATCGACGGCTTCT
ACGGGGCAAGCGTTGAATCCATCTCCACCTCTGGCGGCGCTGAGTGCATC
CTGCTGGTGGCCGGTGGATCGGGTGCGACACCGTTTCTGTGCATGCTGCA
GGAATGGTTCGCAGCCGTCGACCGTGGCCTACGCGTCCCCAGCGTCCATT
TCGTCTGGGCCAGTCGCAGCGTGGAAGAGTTTGAGGTTGTGGGTGAGTTC
CTGTGGGCCCGCCTTGCAGCTGCCGTCACGGAAGAGGGCTTCTGTCCTCG
TGGGGACCTTGAGGTGAGCCTCTTTCTCACCGGCGGCCCTACCGCAGTCG
TTCTTGCATCGGCGGATGGAGCAGCAGAAGAAGCAGGCCTGCCAGCTCAC
GGGGTGCGATACAGCGGCGTCGGCCCAACATCACTGCGTGGCGGCGGCGG
CCTAGCAACCCTTGCCCGGACGAATGGGACGACGGCAGCAGTGGCGGCGG
CGGCGGTTGAGGAGATGCAGCGGTTCGCCCCCCAGCGTGCAGTCACCACT
ACTGACGGCGGCAGTGATCGAAGAGGACACGGCGCTCCGGCTTGGTGGGC
GAGCATCAGCAGCGGTATCGAGACTGTACTCGCGGGCGGAGCGGCGTACG
CTGGTCATGTCGCAGCCATGTGTGAGATACAGCGGCGTGACTTGGCCTTC
TGGCGGCGCGGGATGATCGATATCATTCTCATAATCTTGTTTGCGGTCTT
CATGGTGCTGCTGTGGAGAACCGCCGAGTGCGCCGTCACTTTCGCCTACT
GCAGCGTCGCAGCGAGATCGCGTGCCCGGGTGAAGGAGCCTATCGTCGGC
GGCAGGGATGCCGTTTCCCCAACAATGCTGCCGCGGTCCGCCAACGTTCG
ACCTGACGGCGGCAGCACTGGGATTGGCAACAAGAATAATGACGAAGGCA
AGGCGCAAGAGAGGGCTACCGGGGAGGCTCCGATAGAATCCGACGCTGCC
GTGGCTGGTTGGAGCGGCCAGCATCTTCAAGATGGCAGGCATGTTTCGCT
GACCGTGCTGCCGAGCATCGGTCGCCCCGACATTCCGGCGCTTCTCCTGC
GCGAAGCGGCTGCAGCTGCTGCAGCGGGCAGGCGCCGCATTGGCATCAAG
GTCAGCGGCCCGCGTGGACTTATCGACGACGTGTTGCGCTCTGCCAAGGC
GATGGACTGTAGCATGTATCACGCAGAAGCAGTCTCTTTTCAGTTCTGAC
GCTGATCTGTCGGCGGCGGTGGCGCTTTCGGTGGCAGTGAGCAGTGGCTT
TGGCAGCGGTAGCGATAGCTTCTGCGCGAATGCACTCGAGTTAAGAAAAA
TTTGGGGGGGTGCTAGACACTTTTCGTACCTTAATCTATGGCCACCTGTG
TCCACTGGGCGGCGAAAATAGAATACGTCGCCACGACACCGCTGGCGGCC
ATGTTTGGCTATTCGCGCTGCCCCTGCCACCGCGACCACCCTTTTCGCTC
TTCTCTGGGCACGGCGCGGCGGCATGTCGTCGGTCGCTGGGAGATGCTTG
AAGGCGTCTCGGCGGGGCCGCCGTGGTGTTCCTTTTTTCCGAACCTCTCG
CTTTGTATCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig149:5536..9347-

>mRNA_P-wetherbeei_contig149.2.1 ID=mRNA_P-wetherbeei_contig149.2.1|Name=mRNA_P-wetherbeei_contig149.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2436bp|location=Sequence derived from alignment at P-wetherbeei_contig149:5536..9347- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGTTTCCGCGTCCCTTCGTTACTTTTCTGAGGCCACGGCTCACTGC
CCAGGCGATGAACAGGGCCCCCTTTGCTGGGACTACTCGTCGTGCTTTCC
AAGCAGCACATCGACTACCAGTCACTCCGGTCACACCAGCCACACCAGCC
ACACCAGCCACACCAGCCACACCAGCCACTCCAGCCACTCCAGTCACTCC
AGCCACTCCTACTACTCGTACTACTCCTACTCGAGTTCGTCGTCCACCAC
GGGGCCGTGCGCCGAATCAGGCTCGAGACTGGACTACGCCCTCCAGTCGG
TGGCCCTGCGGCTCGGCTACAACGCTGTGGCCGCGCTGTGCTTCGTCTTC
TTGCCCGTCGCGCGAGACAGCCGACTGCTTGCCGGCCTCGGCATCCCCGC
ACAGCGCGCGGTCGTGTACCACCGCGTCATCGGCCACTACTTCATGTGGG
CGCTCTTCGGCCATGGCTTCATGTACGTCGTCTGGTGGGGGAAAACTGGT
GGCATGCATAAAATTTGGAACGAGTCGTTCTCCTCACCGAACGACGCCTA
CATCAGTGTTCGCGCCGGCTGGCTGGCGTTCCTGGTCGGCGTGCCGGCGT
GGCTGGCCACCCTTGAGGTCGTACGACGCCGGCGGTATCCAGCGTTCAAG
ACGCTGCACTGGCTCAACATCCCTGTACTTTGCCTCTCCGCAGTCCACTG
GCCGTACCTCAGCATGTACATCTTTGGCGGTGTCATCATCTATGCAGTTC
ACGTCGTGTCACGTCTCTCTTCCTGGCAGCGCTGGCGCGCTTCGTGGCGG
CTGGCAGCCGCCCCGCCGGAGCAGTGAGGAGGACTCCGGCGCCCTCGACG
CGACGGCAGACGGCAGCAGCAGATCGGCGCCCGCGTTTGCATTCGCGACG
GTCCTGCAAGCGAAGACTGTGGGGTCGGTTGTCACGCTTGTGCTGCAAAC
GCCGGCTGCTTCGCCGGCTCTGCCTCCAGCCGGCAGCTTCTTTGCCTACC
TGAGCTCGCCGGGCATCTACGGCACCTTCGAGGCGCACCCAATCAGCGTG
GCGCTCCGTGGGGCGCCCCCATCGCTTGCGGAAGATATCTACGTGACTGG
CGGCGGCAGCGGTGACCAAATCTTCACCGTGTACATCAAAGTCGTCGGAG
ACTGGTCGGCCATGCTTGCGCGAATGGTGCAGGCCGGGGGGAGCGTGGGC
CGGTCTCCTCACCTCTTGGTGGACATCGACGGCTTCTACGGGGCAAGCGT
TGAATCCATCTCCACCTCTGGCGGCGCTGAGTGCATCCTGCTGGTGGCCG
GTGGATCGGGTGCGACACCGTTTCTGTGCATGCTGCAGGAATGGTTCGCA
GCCGTCGACCGTGGCCTACGCGTCCCCAGCGTCCATTTCGTCTGGGCCAG
TCGCAGCGTGGAAGAGTTTGAGGTTGTGGGTGAGTTCCTGTGGGCCCGCC
TTGCAGCTGCCGTCACGGAAGAGGGCTTCTGTCCTCGTGGGGACCTTGAG
GTGAGCCTCTTTCTCACCGGCGGCCCTACCGCAGTCGTTCTTGCATCGGC
GGATGGAGCAGCAGAAGAAGCAGGCCTGCCAGCTCACGGGGTGCGATACA
GCGGCGTCGGCCCAACATCACTGCGTGGCGGCGGCGGCCTAGCAACCCTT
GCCCGGACGAATGGGACGACGGCAGCAGTGGCGGCGGCGGCGGTTGAGGA
GATGCAGCGGTTCGCCCCCCAGCGTGCAGTCACCACTACTGACGGCGGCA
GTGATCGAAGAGGACACGGCGCTCCGGCTTGGTGGGCGAGCATCAGCAGC
GGTATCGAGACTGTACTCGCGGGCGGAGCGGCGTACGCTGGTCATGTCGC
AGCCATGTGTGAGATACAGCGGCGTGACTTGGCCTTCTGGCGGCGCGGGA
TGATCGATATCATTCTCATAATCTTGTTTGCGGTCTTCATGGTGCTGCTG
TGGAGAACCGCCGAGTGCGCCGTCACTTTCGCCTACTGCAGCGTCGCAGC
GAGATCGCGTGCCCGGGTGAAGGAGCCTATCGTCGGCGGCAGGGATGCCG
TTTCCCCAACAATGCTGCCGCGGTCCGCCAACGTTCGACCTGACGGCGGC
AGCACTGGGATTGGCAACAAGAATAATGACGAAGGCAAGGCGCAAGAGAG
GGCTACCGGGGAGGCTCCGATAGAATCCGACGCTGCCGTGGCTGGTTGGA
GCGGCCAGCATCTTCAAGATGGCAGGCATGTTTCGCTGACCGTGCTGCCG
AGCATCGGTCGCCCCGACATTCCGGCGCTTCTCCTGCGCGAAGCGGCTGC
AGCTGCTGCAGCGGGCAGGCGCCGCATTGGCATCAAGGTCAGCGGCCCGC
GTGGACTTATCGACGACGTGTTGCGCTCTGCCAAGGCGATGGACTGTAGC
ATGTATCACGCAGAAGCAGTCTCTTTTCAGTTCTGA
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