mRNA_P-wetherbeei_contig1488.7.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1488.7.1 vs. uniprot
Match: A0A3C1FQJ5_9PROT (Uncharacterized protein n=5 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C1FQJ5_9PROT) HSP 1 Score: 94.7 bits (234), Expect = 8.380e-23 Identity = 48/78 (61.54%), Postives = 58/78 (74.36%), Query Frame = 1
Query: 1 MLPPGLARGDELPPGLERQYQRNGTLPPGLQKRQLPDDLARALPRRRGDYDRVIVGNDVLLIQIATGVILDIMEGVAS 234
+LPPGLA+ D L RQ QRNG LPPGL+KR LPD+L RALP R+ D +RVIVGNDV+LI+ T +ILDI+E V
Sbjct: 90 LLPPGLAKRDTLXXXXARQLQRNGKLPPGLEKRGLPDELKRALPARQSDLERVIVGNDVVLIRRGTELILDILEDVVG 167
BLAST of mRNA_P-wetherbeei_contig1488.7.1 vs. uniprot
Match: A0A1G0FU97_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium RBG_16_51_14 TaxID=1798265 RepID=A0A1G0FU97_9GAMM) HSP 1 Score: 93.2 bits (230), Expect = 2.970e-22 Identity = 46/79 (58.23%), Postives = 58/79 (73.42%), Query Frame = 1
Query: 4 LPPGLARGDELPPGLERQYQRNGTLPPGLQKRQLPDDLARALPRRRGDYDRVIVGNDVLLIQIATGVILDIMEGVASGR 240
LPPGLA+ ++LPPGLERQ QRNGTLPPGL R+LP DL + LP ++R IV N V+L++ ATG I DI+E V +G
Sbjct: 87 LPPGLAKKEKLPPGLERQLQRNGTLPPGLAXRELPPDLEQQLPEPAEGFERTIVENTVVLVEKATGRIADIIEDVIAGE 165
BLAST of mRNA_P-wetherbeei_contig1488.7.1 vs. uniprot
Match: A0A1E5Q8G8_9PROT (Uncharacterized protein n=1 Tax=Magnetovibrio blakemorei TaxID=28181 RepID=A0A1E5Q8G8_9PROT) HSP 1 Score: 90.1 bits (222), Expect = 1.790e-20 Identity = 47/79 (59.49%), Postives = 55/79 (69.62%), Query Frame = 1
Query: 4 LPPGLARGDELPPGLERQYQRNGTLPPGLQKRQLPDDLARALPRRRGDYDRVIVGNDVLLIQIATGVILDIMEGVASGR 240
LPPGLA+ LPPGL++QY +NG L KR LPDDL LPRR + D V VGNDV+LI ATGVILD + GV +GR
Sbjct: 102 LPPGLAKRSSLPPGLQKQYDKNGRLXXXXXKRDLPDDLRSKLPRRVENQDVVEVGNDVVLIDRATGVILDTILGVLNGR 180
BLAST of mRNA_P-wetherbeei_contig1488.7.1 vs. uniprot
Match: A0A848WA85_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A848WA85_9PROT) HSP 1 Score: 86.7 bits (213), Expect = 9.130e-20 Identity = 42/78 (53.85%), Postives = 52/78 (66.67%), Query Frame = 1
Query: 7 PPGLARGDELPPGLERQYQRNGTLPPGLQKRQLPDDLARALPRRRGDYDRVIVGNDVLLIQIATGVILDIMEGVASGR 240
PPGLA+ D LPPGL+RQ QRNG LPPGL+K+ P L LP +RVI+GND +LI AT V+LD++ V R
Sbjct: 80 PPGLAKRDSLPPGLQRQLQRNGRLPPGLEKKAFPAHLTGQLPSPLRGTERVIIGNDAVLIDTATNVVLDVVRDVMGNR 157
BLAST of mRNA_P-wetherbeei_contig1488.7.1 vs. uniprot
Match: A0A651FYI3_9PROT (Uncharacterized protein n=1 Tax=Micavibrio sp. TaxID=2024841 RepID=A0A651FYI3_9PROT) HSP 1 Score: 85.9 bits (211), Expect = 2.380e-19 Identity = 43/76 (56.58%), Postives = 55/76 (72.37%), Query Frame = 1
Query: 7 PPGLARGDELPPGLERQYQRNGTLPPGLQKRQLPDDLARALPRRRGDYDRVIVGNDVLLIQIATGVILDIMEGVAS 234
PPGLA+ D LPPGL Q +RNG LPPGL+K+ L DL R LP R G R++ G+DVLL+ AT +I+DI++GVA
Sbjct: 94 PPGLAKRDSLPPGLAMQLERNGRLPPGLEKQGLSADLERRLPLREG-LKRILAGDDVLLVDTATDIIVDILKGVAQ 168
BLAST of mRNA_P-wetherbeei_contig1488.7.1 vs. uniprot
Match: A0A557SH50_9GAMM (Uncharacterized protein n=1 Tax=Sedimenticola selenatireducens TaxID=191960 RepID=A0A557SH50_9GAMM) HSP 1 Score: 81.3 bits (199), Expect = 9.230e-18 Identity = 41/75 (54.67%), Postives = 52/75 (69.33%), Query Frame = 1
Query: 4 LPPGLARGDELPPGLERQYQRNGTLPPGLQKRQLPDDLARALPRRRGDYDRVIVGNDVLLIQIATGVILDIMEGV 228
+PPGLA+ + Q +RNG LPPGL+KR LPD L + LP RR RV+V NDVLLI+ ATG+ILDI++ V
Sbjct: 73 MPPGLAKREXXXXXXXXQLERNGRLPPGLEKRDLPDGLDKLLPPRRHGQQRVVVDNDVLLIETATGLILDILKDV 147
BLAST of mRNA_P-wetherbeei_contig1488.7.1 vs. uniprot
Match: A0A357FZN3_9PROT (Uncharacterized protein (Fragment) n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A357FZN3_9PROT) HSP 1 Score: 79.3 bits (194), Expect = 9.300e-18 Identity = 44/74 (59.46%), Postives = 54/74 (72.97%), Query Frame = 1
Query: 4 LPPGLA-RGDELPPGLERQYQRNGTLPPGLQKRQLPDDLARALPRRRGDYDRVIVGNDVLLIQIATGVILDIME 222
LP GL+ R +LPPGL++ ++NGTLPPGL KR+LPDDL R L R IV NDV+LI+ ATGVILDI+E
Sbjct: 3 LPHGLSKRCGDLPPGLQKHLEKNGTLPPGLAKRELPDDLYRRLGPPPKGTGRYIVDNDVVLIEEATGVILDIIE 76
BLAST of mRNA_P-wetherbeei_contig1488.7.1 vs. uniprot
Match: A0A1G0JW19_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_56_15 TaxID=1798298 RepID=A0A1G0JW19_9GAMM) HSP 1 Score: 79.3 bits (194), Expect = 7.770e-17 Identity = 43/80 (53.75%), Postives = 53/80 (66.25%), Query Frame = 1
Query: 4 LPPGLARGDELPPGLERQYQRNGTLPPGLQKRQLPDDLARALPRRRGDYDRVIVGNDVL-LIQIATGVILDIMEGVASGR 240
LP GLA+ + LPPGLERQ Q+NG LPPGL KR LP DL R LP + Y+R I+ + V+ L+ ATG I DI+ GR
Sbjct: 85 LPTGLAKRERLPPGLERQLQKNGALPPGLAKRGLPADLERQLPPVKEGYERQIIEDSVIILVDQATGRIADIITDAIVGR 164
BLAST of mRNA_P-wetherbeei_contig1488.7.1 vs. uniprot
Match: UPI0004722C57 (hypothetical protein n=1 Tax=Sneathiella glossodoripedis TaxID=418853 RepID=UPI0004722C57) HSP 1 Score: 79.0 bits (193), Expect = 8.930e-17 Identity = 41/77 (53.25%), Postives = 53/77 (68.83%), Query Frame = 1
Query: 4 LPPGLARGDELPPGLERQYQRNGTLPPGLQKRQLPDDLARALPRRRGDYDRVIVGNDVLLIQIATGVILDIMEGVAS 234
LPPGLA+ + Q Q G+LPP L KRQLPD L + LP+R ++RVIVGND+LLI+ T +ILDI+ GVA+
Sbjct: 79 LPPGLAKKNXXXXXXXXQLQIKGSLPPRLAKRQLPDKLHQRLPKRSPIFERVIVGNDILLIEKGTEIILDILRGVAN 155
BLAST of mRNA_P-wetherbeei_contig1488.7.1 vs. uniprot
Match: A0A7C1D104_9GAMM (Uncharacterized protein n=1 Tax=Thioalkalivibrio sp. TaxID=2093813 RepID=A0A7C1D104_9GAMM) HSP 1 Score: 79.0 bits (193), Expect = 1.120e-16 Identity = 41/75 (54.67%), Postives = 50/75 (66.67%), Query Frame = 1
Query: 4 LPPGLARGDELPPGLERQYQRNGTLPPGLQKRQLPDDLARALPRRRGDYDRVIVGNDVLLIQIATGVILDIMEGV 228
LPPGLAR + LPPGLERQ GTLPPGL+ R+LP DL R L R Y R++VG V+LI T ++ DI+ V
Sbjct: 89 LPPGLARRERLPPGLERQLYSRGTLPPGLEYRRLPYDLDRQLSRLPDGYGRMVVGAHVVLIDENTRIVFDIIRNV 163 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1488.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1488.7.1 >prot_P-wetherbeei_contig1488.7.1 ID=prot_P-wetherbeei_contig1488.7.1|Name=mRNA_P-wetherbeei_contig1488.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=81bp MLPPGLARGDELPPGLERQYQRNGTLPPGLQKRQLPDDLARALPRRRGDYback to top mRNA from alignment at P-wetherbeei_contig1488:5502..5744- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1488.7.1 ID=mRNA_P-wetherbeei_contig1488.7.1|Name=mRNA_P-wetherbeei_contig1488.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=243bp|location=Sequence derived from alignment at P-wetherbeei_contig1488:5502..5744- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1488:5502..5744- >mRNA_P-wetherbeei_contig1488.7.1 ID=mRNA_P-wetherbeei_contig1488.7.1|Name=mRNA_P-wetherbeei_contig1488.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=243bp|location=Sequence derived from alignment at P-wetherbeei_contig1488:5502..5744- (Phaeothamnion wetherbeei SAG_119_79)back to top |