mRNA_P-wetherbeei_contig1488.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1488.3.1
Unique NamemRNA_P-wetherbeei_contig1488.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1488.3.1 vs. uniprot
Match: A0A363TRV1_9BRAD (Formate transporter FocA n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A363TRV1_9BRAD)

HSP 1 Score: 322 bits (824), Expect = 2.110e-107
Identity = 167/276 (60.51%), Postives = 208/276 (75.36%), Query Frame = 1
Query:    1 DALLPKEMAEKAERIGADKTRLPVLSLLTLAVLAGAFIAFGSMFSTIAISATDNHLTFGLARVVAGLTFSLGLILVVVGGAELFTGNNLMVMAWAGGKISLGGMLRAWALVYIGNFVGAVATAVMVFLAGVHGNGDAAVGAAALNIAEAKAALPFFPALMRGVLGNVLVCLAVWLCYSAHSTTDRILCIVPPVTAFVAAGFEHSVANMFILPYGLLIKELAEPAFWTAIQQSPASYEALSWGAFFSNLAPVTIGNVIGGGMFVGAVYWFIYLRSRT 828
            DALLP+E+AEKAE +G  K R   ++L  L VLAGAFIA G+MF+T  ++ ++  L FG++R++AGL F LGLILV++GGAELFTGN LMVMA A GK+SLG MLRAW +VY GN VGA+ TA +VFL+G +   D AV   AL++A  KA LPF  AL  G+L NVLVCLAVWL   A STTD+++ IV PV+AFV AGFEHSVANM+++P GLLIK LA  A W+A+  +PA    L+ G  F+NL PVTIGNVIGGG+ VGAVYWF+YLR+R 
Sbjct:   11 DALLPQEVAEKAEALGIQKARRDAVTLFVLGVLAGAFIALGAMFATTVLAGSEGVLPFGVSRLLAGLVFCLGLILVILGGAELFTGNALMVMALAAGKLSLGAMLRAWGIVYAGNLVGALGTAALVFLSGQYLAADGAVARVALSLASDKATLPFDRALFLGILCNVLVCLAVWLALGARSTTDKVMAIVFPVSAFVVAGFEHSVANMYLIPLGLLIKWLAPAALWSALATTPAELGGLTLGGLFANLVPVTIGNVIGGGVLVGAVYWFVYLRTRA 286          
BLAST of mRNA_P-wetherbeei_contig1488.3.1 vs. uniprot
Match: A0A5Q4ELK2_9BACT (Formate transporter FocA n=1 Tax=Phycisphaeraceae bacterium TaxID=2026777 RepID=A0A5Q4ELK2_9BACT)

HSP 1 Score: 316 bits (809), Expect = 4.580e-105
Identity = 163/276 (59.06%), Postives = 205/276 (74.28%), Query Frame = 1
Query:    1 DALLPKEMAEKAERIGADKTRLPVLSLLTLAVLAGAFIAFGSMFSTIAISATDNHLTFGLARVVAGLTFSLGLILVVVGGAELFTGNNLMVMAWAGGKISLGGMLRAWALVYIGNFVGAVATAVMVFLAGVHGNGDAAVGAAALNIAEAKAALPFFPALMRGVLGNVLVCLAVWLCYSAHSTTDRILCIVPPVTAFVAAGFEHSVANMFILPYGLLIKELAEPAFWTAIQQSPASYEALSWGAFF-SNLAPVTIGNVIGGGMFVGAVYWFIYLRSR 825
            DAL+P EMA +AE IG  K  L  L+   LAVLAGAFI+ G++F+T   +     L +G+ R++AGL F LGLILVVV GAELFTGNNL+VMAWA  K+S+  +LR W +V++GNF GA+AT V++ ++G H  G  AVGAAAL  A+AK  L F  A+  G+  N LVCLAVW+ YSA +TTDRIL I+ P+TAFVAAGFEHSVANM+ +P GLLI++LA P FWT I Q+ A Y++L+WGAF   NL PVT+GN+IGGG+ VG VYWFIYLR R
Sbjct:    8 DALMPPEMAVRAEEIGVRKANLDALTTFVLAVLAGAFISLGAIFATTVTAGAAEVLPWGVTRLLAGLVFCLGLILVVVAGAELFTGNNLIVMAWASRKVSITRLLRNWGVVFVGNFAGALATVVIMHISGQHNFGAGAVGAAALATAKAKVELGFIEAIALGIFCNALVCLAVWMTYSARTTTDRILAILFPITAFVAAGFEHSVANMYFIPIGLLIRDLATPEFWTMIGQASADYDSLTWGAFLLRNLLPVTLGNIIGGGLMVGVVYWFIYLRPR 283          
BLAST of mRNA_P-wetherbeei_contig1488.3.1 vs. uniprot
Match: A0A6N6L5J6_9CHLR (Formate transporter FocA n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6N6L5J6_9CHLR)

HSP 1 Score: 312 bits (800), Expect = 9.620e-104
Identity = 159/275 (57.82%), Postives = 206/275 (74.91%), Query Frame = 1
Query:    1 DALLPKEMAEKAERIGADKTRLPVLSLLTLAVLAGAFIAFGSMFSTIAISATDNHLTFGLARVVAGLTFSLGLILVVVGGAELFTGNNLMVMAWAGGKISLGGMLRAWALVYIGNFVGAVATAVMVFLAGVHGNGDAAVGAAALNIAEAKAALPFFPALMRGVLGNVLVCLAVWLCYSAHSTTDRILCIVPPVTAFVAAGFEHSVANMFILPYGLLIKELAEPAFWTAIQQSPASYEALSWGAFF-SNLAPVTIGNVIGGGMFVGAVYWFIYLRS 822
            DAL+P EMA KAE +G  K RL    +  LAVLAG+FI  G++F+T   + +   + +GL R++ G+ FSLGLILV+VGGAELFTGNNL+VMAWA  KI+ G +LR W +VY+GNFVG++ TA ++FL+G + NG  AVGA+AL  A AKA L F  AL+ G+L N LVCLAVWL +SA +TTD+I+ I+PP+ AFVAAGFEHSVANM+ +P GLLIK  A P FW +I ++ A Y  L+W  FF +NL PVTIGN+IGG +FVG VYWF++LR+
Sbjct:   10 DALIPAEMAAKAEAVGVSKARLGKRRMFLLAVLAGSFIGLGAIFATTVAAGSGGIMPYGLTRLLVGIVFSLGLILVIVGGAELFTGNNLIVMAWANQKITTGRLLRNWIVVYLGNFVGSILTAGLLFLSGQYQNGGGAVGASALATANAKAGLGFVEALVLGILCNALVCLAVWLTFSARTTTDKIMAIIPPIAAFVAAGFEHSVANMYFIPVGLLIKSGASPEFWASIGKTAADYPDLTWMNFFITNLVPVTIGNIIGGTLFVGGVYWFLFLRT 284          
BLAST of mRNA_P-wetherbeei_contig1488.3.1 vs. uniprot
Match: A0A3D0CXV0_9CHLR (Formate transporter FocA n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3D0CXV0_9CHLR)

HSP 1 Score: 313 bits (802), Expect = 1.100e-103
Identity = 158/276 (57.25%), Postives = 204/276 (73.91%), Query Frame = 1
Query:    1 DALLPKEMAEKAERIGADKTRLPVLSLLTLAVLAGAFIAFGSMFSTIAISATDNHLTFGLARVVAGLTFSLGLILVVVGGAELFTGNNLMVMAWAGGKISLGGMLRAWALVYIGNFVGAVATAVMVFLAGVHGNGDAAVGAAALNIAEAKAALPFFPALMRGVLGNVLVCLAVWLCYSAHSTTDRILCIVPPVTAFVAAGFEHSVANMFILPYGLLIKELAEPAFWTAIQQSPASYEALSWGAFF-SNLAPVTIGNVIGGGMFVGAVYWFIYLRSR 825
            DALLP EMA KAE++G  K  + ++S+  LAVLAGAFIA G++F+T  ++   + L +G+ R++AG  F+LGLILV+VGGAELFTGNNL+VMAWA  K+S   +LR W +VY+GNFVG+V TA++VF++G    G  A+G AAL  A  K  L F  A+  G+L N LVCLAVWL +SA +TTDRIL I+PP+ AFVAAGFEHSVANM+ +P GL IK  A  +FW  I +SPA Y  L+WG F  +NL PVT+GN+IGG + VGAVYWF+YLR +
Sbjct:   10 DALLPPEMAAKAEQVGVKKAHMDLVSMFVLAVLAGAFIALGAIFATTVVAGAGDGLPYGVTRLLAGSVFTLGLILVIVGGAELFTGNNLIVMAWANHKVSTDLLLRNWTIVYLGNFVGSVGTALLVFVSGQFTFGQGAIGVAALATASGKVGLSFVQAIALGILCNALVCLAVWLTFSARTTTDRILAIIPPIAAFVAAGFEHSVANMYFVPIGLFIKAGAPASFWATIGKSPADYPGLTWGRFLLNNLLPVTMGNIIGGAILVGAVYWFVYLRPQ 285          
BLAST of mRNA_P-wetherbeei_contig1488.3.1 vs. uniprot
Match: H0I3D7_9HYPH (Formate/nitrite transporter n=2 Tax=Mesorhizobium alhagi TaxID=475067 RepID=H0I3D7_9HYPH)

HSP 1 Score: 311 bits (798), Expect = 1.250e-103
Identity = 164/268 (61.19%), Postives = 202/268 (75.37%), Query Frame = 1
Query:   22 MAEKAERIGADKTRLPVLSLLTLAVLAGAFIAFGSMFSTIAISATDNHLTFGLARVVAGLTFSLGLILVVVGGAELFTGNNLMVMAWAGGKISLGGMLRAWALVYIGNFVGAVATAVMVFLAGVHGNGDAAVGAAALNIAEAKAALPFFPALMRGVLGNVLVCLAVWLCYSAHSTTDRILCIVPPVTAFVAAGFEHSVANMFILPYGLLIKELAEPAFWTAIQQSPASYEALSWGAFFSNLAPVTIGNVIGGGMFVGAVYWFIYLRSR 825
            MA+ AE+IG DKTRL  LSLL LAVLAGAFIAFGSMFS I  + T+  L +G+ R++ GL FSLGLILVVVGGAELFTGNNLMVMA+A G++ +G +LRAW LVY+GNFVG +  A +VFLA  + +G  AVG AAL  AE K +L    AL+ G+L NVLVCLA+WLCYSA +TTD+IL IVPPV  FVAAGFEHS+ANM++L + LL K  A   FW AI Q+P+++  L+  A  +NL  VTIGN++GG + VG  YWF+YLR R
Sbjct:    1 MAQAAEQIGVDKTRLDTLSLLALAVLAGAFIAFGSMFSVIVTAGTEGALPYGVIRLLGGLVFSLGLILVVVGGAELFTGNNLMVMAYASGRVGMGEVLRAWGLVYLGNFVGGLGIAALVFLAAGYSHGSGAVGEAALASAETKTSLSALQALIHGILANVLVCLAIWLCYSARTTTDKILAIVPPVAGFVAAGFEHSIANMYLLSFALLTKFGAPSEFWDAISQTPSAFPHLTVVAALANLLWVTIGNMMGG-ILVGVTYWFVYLRKR 267          
BLAST of mRNA_P-wetherbeei_contig1488.3.1 vs. uniprot
Match: A0A1F8NLE9_9CHLR (Formate transporter FocA n=1 Tax=Chloroflexi bacterium RBG_13_66_10 TaxID=1797637 RepID=A0A1F8NLE9_9CHLR)

HSP 1 Score: 310 bits (795), Expect = 1.010e-102
Identity = 166/287 (57.84%), Postives = 208/287 (72.47%), Query Frame = 1
Query:    1 DALLPKEMAEKAERIGADKTRLPVLSLLTLAVLAGAFIAFGSMFST------IAISATDNHLTF------GLARVVAGLTFSLGLILVVVGGAELFTGNNLMVMAWAGGKISLGGMLRAWALVYIGNFVGAVATAVMVFLAGVHGNGDAAVGAAALNIAEAKAALPFFPALMRGVLGNVLVCLAVWLCYSAHSTTDRILCIVPPVTAFVAAGFEHSVANMFILPYGLLIKELAEPAFWTAIQQSPASYEALSWGAFF-SNLAPVTIGNVIGGGMFVGAVYWFIYLRS 822
            DALLP  MA +AE IG  K RL +  +  LAVLAGAFIA G++F+T      IA+ A D  LTF      G+ R++ GL F+LGLILV+VGG+ELFTGNNL+VMA+A GK+ LG +LR W +VY+GNFVG++ATA +VFL+  +  G  A+G   L I EAK +L F  A+  GVL N LVCLAVWLC+SA STTDRIL I+PP+ AFVAAGFEHS+ANM+ +P  L +K+  EPAF+  I ++ A +  L+WG FF SNL PVTIGN+IGG + VG VYWFIYLRS
Sbjct:    8 DALLPPAMASRAENIGLVKARLGIRRMFALAVLAGAFIAMGAIFATTVGAGGIAVRAADGTLTFSTGLPYGVVRLLTGLVFTLGLILVIVGGSELFTGNNLIVMAFASGKVGLGQLLRNWTVVYVGNFVGSIATAFVVFLSKQYTFGGGAIGLNVLAIGEAKTSLEFVQAIALGVLCNALVCLAVWLCFSARSTTDRILSIIPPIAAFVAAGFEHSIANMYFIPVALFVKQWGEPAFFQTIGRTAADFPHLTWGGFFVSNLIPVTIGNIIGGAVMVGLVYWFIYLRS 294          
BLAST of mRNA_P-wetherbeei_contig1488.3.1 vs. uniprot
Match: A0A7C1IZF4_9CHLR (Formate transporter FocA n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C1IZF4_9CHLR)

HSP 1 Score: 309 bits (792), Expect = 1.680e-102
Identity = 162/275 (58.91%), Postives = 204/275 (74.18%), Query Frame = 1
Query:    1 DALLPKEMAEKAERIGADKTRLPVLSLLTLAVLAGAFIAFGSMFSTIAISATDNHLTFGLARVVAGLTFSLGLILVVVGGAELFTGNNLMVMAWAGGKISLGGMLRAWALVYIGNFVGAVATAVMVFLAGVHGNGDAAVGAAALNIAEAKAALPFFPALMRGVLGNVLVCLAVWLCYSAHSTTDRILCIVPPVTAFVAAGFEHSVANMFILPYGLLIKELAEPAFWTAIQQSPASYEALSWGAFF-SNLAPVTIGNVIGGGMFVGAVYWFIYLRS 822
            DALLP EMA KAE IG  K  +  +S+  LAVLAGAFI+ G++FST  I+     L +G+AR++AGL F+LGLILVVVGGAELFTGNNL+VMAWA GK+S G +L+ W +VY+GNFVGA ATA ++F    +  G  AVG AALN   AK+ L F  AL  GV+ N LVCLAVWL +SA +TTDRI+ I+PP+TAFVAAGFEHSVANM+ +P  L IK  A   FW+AI ++ A +  L+W  FF +NL PVT+GN++GG + VGAVYWF+YLR+
Sbjct:    9 DALLPAEMASKAETIGVKKAHMNAVSMFVLAVLAGAFISLGAIFSTTVIAGA-GELPYGVARLLAGLVFTLGLILVVVGGAELFTGNNLIVMAWADGKVSAGLLLKNWIIVYLGNFVGAFATAGLMFFTRQYSFGGGAVGLAALNTGNAKSGLDFVQALALGVMCNALVCLAVWLTFSARTTTDRIVAIIPPITAFVAAGFEHSVANMYFIPVALFIKAGAPDTFWSAIGKTAADFTNLTWDKFFLNNLLPVTLGNILGGAVLVGAVYWFVYLRA 282          
BLAST of mRNA_P-wetherbeei_contig1488.3.1 vs. uniprot
Match: E8N272_ANATU (Formate/nitrite transporter n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) TaxID=926569 RepID=E8N272_ANATU)

HSP 1 Score: 309 bits (792), Expect = 1.680e-102
Identity = 167/281 (59.43%), Postives = 214/281 (76.16%), Query Frame = 1
Query:    1 DALLPKEMAEKAERIGADKTRLPVLSLLTLAVLAGAFIAFGSMFSTIAISATDNHLTFGLARVVAGLTFSLGLILVVVGGAELFTGNNLMVMAWAGGKISLGGMLRAWALVYIGNFVGAVATAVMVFLAGVHGNGDAAVGAAALNIAEAKAALPFFPALMRGVLGNVLVCLAVWLCYSAHSTTDRILCIVPPVTAFVAAGFEHSVANMFILPYGLLIKELAEPAFW--TAIQQS---PASYEALSWGAFF-SNLAPVTIGNVIGGGMFVGAVYWFIYLRSR 825
            DALLP EMA+KAE IG  K  L +LS+  LAVLAGAFIA G++FST  +SA  + L +G+ R++AGL FSLGL LVVVGGAELFTGN L++MA+A GK+S G +LR W +VY+GNFVG++ATA +VFL+  +  G+  VG  ALNIA +K+AL F PA+  G+L N LVCLAVWL YSA +TTD+IL I+PP+TAFVAAGFEHS+ANM+ +P GL IK  A  +FW   A++++     S+ AL+WG FF +NL PVT+GN+IGGG+ VG VYWF+YLR  
Sbjct:   10 DALLPPEMAKKAEAIGVKKASLDLLSMFALAVLAGAFIAMGAIFST-TVSA-GSTLPYGVTRLLAGLAFSLGLTLVVVGGAELFTGNVLILMAFANGKVSFGALLRNWLVVYLGNFVGSLATAGLVFLSKQYTFGNGVVGLTALNIANSKSALEFVPAVALGILCNALVCLAVWLTYSARTTTDKILAILPPITAFVAAGFEHSIANMYFIPLGLFIKNWAPASFWGLKALEEAGKTAGSFTALTWGNFFVNNLIPVTLGNIIGGGVLVGLVYWFVYLRGH 288          
BLAST of mRNA_P-wetherbeei_contig1488.3.1 vs. uniprot
Match: UPI001CD41E6F (formate/nitrite transporter family protein n=2 Tax=Bradyrhizobiaceae TaxID=41294 RepID=UPI001CD41E6F)

HSP 1 Score: 309 bits (791), Expect = 2.730e-102
Identity = 166/274 (60.58%), Postives = 203/274 (74.09%), Query Frame = 1
Query:    1 DALLPKEMAEKAERIGADKTRLPVLSLLTLAVLAGAFIAFGSMFSTIAISATDNHLTFGLARVVAGLTFSLGLILVVVGGAELFTGNNLMVMAWAGGKISLGGMLRAWALVYIGNFVGAVATAVMVFLAGVHGNGDAAVGAAALNIAEAKAALPFFPALMRGVLGNVLVCLAVWLCYSAHSTTDRILCIVPPVTAFVAAGFEHSVANMFILPYGLLIKELAEPAFWTAIQQSPASYEALSWGAFFSNLAPVTIGNVIGGGMFVGAVYWFIYLRS 822
            DALLP+EMAE+AE+IG DKT L    L+ LAVLAGAFIAFGSMFS +A++  +  L +G+ R++ G  FSLGLILV+VGGAELFTGNNLM+MA A G++  G +LRAW LVYIGNFVGAV  AV+VFLA  H +G+ AVG  AL  A+AKA+L    AL+ GVL NVLVCLA WLCY A STTD+IL IV P+ AF AAGFEHS+ANM++L +GLL K  A+ +FW  I ++  S+  L+     SNL  VT GN+IGG + VG  YWFIYLR 
Sbjct:   11 DALLPREMAERAEQIGVDKTHLETGRLMALAVLAGAFIAFGSMFSVVAMAGAEGVLPYGVIRLLGGTVFSLGLILVIVGGAELFTGNNLMIMACASGRVGAGALLRAWTLVYIGNFVGAVGIAVLVFLAAGHAHGNGAVGMTALAGADAKASLSAMQALIHGVLANVLVCLATWLCYGARSTTDKILAIVFPIAAFAAAGFEHSIANMYLLTFGLLTKFGADSSFWGLIGKTSHSFPQLTVLGALSNLIWVTFGNMIGG-VLVGITYWFIYLRG 283          
BLAST of mRNA_P-wetherbeei_contig1488.3.1 vs. uniprot
Match: A0A0P6XHP4_9CHLR (Formate transporter n=1 Tax=Thermanaerothrix daxensis TaxID=869279 RepID=A0A0P6XHP4_9CHLR)

HSP 1 Score: 305 bits (781), Expect = 7.860e-101
Identity = 160/281 (56.94%), Postives = 211/281 (75.09%), Query Frame = 1
Query:    1 DALLPKEMAEKAERIGADKTRLPVLSLLTLAVLAGAFIAFGSMFSTIAISATDNHLTFGLARVVAGLTFSLGLILVVVGGAELFTGNNLMVMAWAGGKISLGGMLRAWALVYIGNFVGAVATAVMVFLAGVHGNGDAAVGAAALNIAEAKAALPFFPALMRGVLGNVLVCLAVWLCYSAHSTTDRILCIVPPVTAFVAAGFEHSVANMFILPYGLLIKELAEPAFWT--AIQQSPA---SYEALSWGAFF-SNLAPVTIGNVIGGGMFVGAVYWFIYLRSR 825
            DAL+P EMA+KAE IG  K  L   S+L L++LAGAFIA G++F+T  +SA  + L +G+ R++ GL F+LGLILV+VGGAELFTGNNL++MA+  GK++LG ++R W +VY+GNF+G++ATA++VFL+G +  G+ A+G  ALNIA AK +L F  A+  G+L N LVCLAVWLCYSA +TTD+IL I+PP++AFVAAGFEHS+ANM+ +P GL IK+ A  +FW   A+  S     SY  L+W  FF +NL PVTIGN+IGG   VG VYWFIYLR  
Sbjct:   10 DALMPPEMAQKAEAIGVKKANLDFWSMLALSILAGAFIALGAIFAT-TVSA-GSTLPYGVTRLLTGLVFTLGLILVIVGGAELFTGNNLIIMAFTSGKVTLGALMRNWVIVYVGNFIGSIATALLVFLSGQYKFGNGAIGLNALNIANAKVSLEFVQAIALGILCNALVCLAVWLCYSARTTTDKILSIIPPISAFVAAGFEHSIANMYFIPIGLFIKQWAPASFWKLQALVDSGKTVESYANLTWVNFFLANLLPVTIGNIIGGAFMVGLVYWFIYLRHH 288          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1488.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A363TRV1_9BRAD2.110e-10760.51Formate transporter FocA n=1 Tax=Bradyrhizobiaceae... [more]
A0A5Q4ELK2_9BACT4.580e-10559.06Formate transporter FocA n=1 Tax=Phycisphaeraceae ... [more]
A0A6N6L5J6_9CHLR9.620e-10457.82Formate transporter FocA n=1 Tax=Chloroflexi bacte... [more]
A0A3D0CXV0_9CHLR1.100e-10357.25Formate transporter FocA n=1 Tax=Chloroflexi bacte... [more]
H0I3D7_9HYPH1.250e-10361.19Formate/nitrite transporter n=2 Tax=Mesorhizobium ... [more]
A0A1F8NLE9_9CHLR1.010e-10257.84Formate transporter FocA n=1 Tax=Chloroflexi bacte... [more]
A0A7C1IZF4_9CHLR1.680e-10258.91Formate transporter FocA n=1 Tax=Chloroflexi bacte... [more]
E8N272_ANATU1.680e-10259.43Formate/nitrite transporter n=1 Tax=Anaerolinea th... [more]
UPI001CD41E6F2.730e-10260.58formate/nitrite transporter family protein n=2 Tax... [more]
A0A0P6XHP4_9CHLR7.860e-10156.94Formate transporter n=1 Tax=Thermanaerothrix daxen... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1488contigP-wetherbeei_contig1488:1284..2114 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog926569.ANT_29930
PFAMsForm_Nir_trans
Model size831
Max annot lvl200795|Chloroflexi
KEGG koko:K06212
KEGG TC1.A.16.1.1,1.A.16.1.3
Hectar predicted targeting categorysignal anchor
Exons1
Evalue7.57e-99
EggNOG OGsCOG2116@1|root,COG2116@2|Bacteria,2G967@200795|Chloroflexi
DescriptionFormate/nitrite transporter
Cds size810
COG categoryP
BRITEko00000,ko02000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186036.3404198-UTR-P-wetherbeei_contig1488:1283..13041683186036.3404198-UTR-P-wetherbeei_contig1488:1283..1304Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1488 1284..1304 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186036.351241-CDS-P-wetherbeei_contig1488:1304..21141683186036.351241-CDS-P-wetherbeei_contig1488:1304..2114Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1488 1305..2114 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1488.3.1prot_P-wetherbeei_contig1488.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1488 1305..2114 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1488.3.1

>prot_P-wetherbeei_contig1488.3.1 ID=prot_P-wetherbeei_contig1488.3.1|Name=mRNA_P-wetherbeei_contig1488.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=270bp
MAEKAERIGADKTRLPVLSLLTLAVLAGAFIAFGSMFSTIAISATDNHLT
FGLARVVAGLTFSLGLILVVVGGAELFTGNNLMVMAWAGGKISLGGMLRA
WALVYIGNFVGAVATAVMVFLAGVHGNGDAAVGAAALNIAEAKAALPFFP
ALMRGVLGNVLVCLAVWLCYSAHSTTDRILCIVPPVTAFVAAGFEHSVAN
MFILPYGLLIKELAEPAFWTAIQQSPASYEALSWGAFFSNLAPVTIGNVI
GGGMFVGAVYWFIYLRSRT*
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mRNA from alignment at P-wetherbeei_contig1488:1284..2114+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1488.3.1 ID=mRNA_P-wetherbeei_contig1488.3.1|Name=mRNA_P-wetherbeei_contig1488.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=831bp|location=Sequence derived from alignment at P-wetherbeei_contig1488:1284..2114+ (Phaeothamnion wetherbeei SAG_119_79)
GATGCCCTGTTGCCGAAGGAAATGGCCGAAAAGGCGGAACGGATCGGCGC GGATAAAACCCGCCTGCCAGTGCTGAGTTTGCTGACGCTGGCGGTGCTGG CCGGGGCTTTCATCGCTTTCGGGTCCATGTTTTCCACCATTGCCATTTCC GCTACCGACAACCACCTGACTTTTGGGCTTGCGCGGGTTGTGGCGGGGCT GACCTTTTCCCTGGGGCTGATACTGGTCGTGGTTGGCGGGGCGGAACTGT TCACCGGCAATAATCTGATGGTGATGGCCTGGGCCGGGGGCAAAATCAGT CTGGGTGGCATGCTGCGCGCCTGGGCTTTGGTCTATATCGGCAATTTCGT GGGCGCGGTGGCAACCGCCGTAATGGTGTTTTTGGCCGGGGTGCACGGGA ATGGCGATGCCGCCGTCGGGGCCGCAGCGCTGAATATTGCCGAGGCCAAG GCTGCGCTGCCGTTTTTCCCGGCCCTGATGCGGGGCGTTCTGGGCAATGT GCTGGTCTGTCTGGCCGTCTGGCTGTGTTACAGCGCTCACTCCACGACAG ACAGGATTTTATGCATTGTCCCTCCTGTAACCGCATTCGTTGCGGCGGGT TTTGAGCACAGCGTCGCCAATATGTTCATTCTGCCCTATGGCCTGTTGAT CAAGGAATTGGCGGAGCCAGCTTTTTGGACAGCCATTCAGCAAAGCCCTG CCAGTTATGAAGCGCTGAGCTGGGGCGCGTTTTTCAGCAATCTGGCGCCA GTTACCATCGGCAATGTGATTGGCGGGGGTATGTTCGTTGGGGCTGTCTA TTGGTTCATTTATCTGCGAAGCCGTACTTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1488:1284..2114+

>mRNA_P-wetherbeei_contig1488.3.1 ID=mRNA_P-wetherbeei_contig1488.3.1|Name=mRNA_P-wetherbeei_contig1488.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=810bp|location=Sequence derived from alignment at P-wetherbeei_contig1488:1284..2114+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCCGAAAAGGCGGAACGGATCGGCGCGGATAAAACCCGCCTGCCAGT
GCTGAGTTTGCTGACGCTGGCGGTGCTGGCCGGGGCTTTCATCGCTTTCG
GGTCCATGTTTTCCACCATTGCCATTTCCGCTACCGACAACCACCTGACT
TTTGGGCTTGCGCGGGTTGTGGCGGGGCTGACCTTTTCCCTGGGGCTGAT
ACTGGTCGTGGTTGGCGGGGCGGAACTGTTCACCGGCAATAATCTGATGG
TGATGGCCTGGGCCGGGGGCAAAATCAGTCTGGGTGGCATGCTGCGCGCC
TGGGCTTTGGTCTATATCGGCAATTTCGTGGGCGCGGTGGCAACCGCCGT
AATGGTGTTTTTGGCCGGGGTGCACGGGAATGGCGATGCCGCCGTCGGGG
CCGCAGCGCTGAATATTGCCGAGGCCAAGGCTGCGCTGCCGTTTTTCCCG
GCCCTGATGCGGGGCGTTCTGGGCAATGTGCTGGTCTGTCTGGCCGTCTG
GCTGTGTTACAGCGCTCACTCCACGACAGACAGGATTTTATGCATTGTCC
CTCCTGTAACCGCATTCGTTGCGGCGGGTTTTGAGCACAGCGTCGCCAAT
ATGTTCATTCTGCCCTATGGCCTGTTGATCAAGGAATTGGCGGAGCCAGC
TTTTTGGACAGCCATTCAGCAAAGCCCTGCCAGTTATGAAGCGCTGAGCT
GGGGCGCGTTTTTCAGCAATCTGGCGCCAGTTACCATCGGCAATGTGATT
GGCGGGGGTATGTTCGTTGGGGCTGTCTATTGGTTCATTTATCTGCGAAG
CCGTACTTAA
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