mRNA_P-wetherbeei_contig14877.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14877.1.1 vs. uniprot
Match: D8LMG0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMG0_ECTSI) HSP 1 Score: 305 bits (782), Expect = 9.570e-102 Identity = 152/220 (69.09%), Postives = 184/220 (83.64%), Query Frame = 1
Query: 1 MDLEATCDQMITLLTINPERVYKTAYYRKQTKNHWARDDPGFAVLQALFLMVAAVAFGVVFRLRGFWHYLWLVVHAVALHWLLFGVMAASLGRWLANGYLLQHRSHSVEQVVEWLYAFDIHCNSFFPLFILLYVVQFLLLPVLLGKSFLALILSNTLYAVAFSLYFYVSHLGYRALPFLSRTEVFLYPVGAVLLLLALTIVLHPLGLGLNMTRVMAHVYF 660
MD+EAT DQM+TLL++NP+RVYKTAYYRKQTKNHWARDDPGFAVLQ FL+VA AFGV F RG W Y+ L++H+V +HWLL GV+ +SL RW+AN LLQHRSHSVEQ VEW+YA DIH NSFFPLF+ LYVVQ LLLP+L+G+S +LIL+NTLYAVAFS+YFYV+HLGYR+LPFL TEVFLYPV +++LL L+I+L P G+ +N T MA +YF
Sbjct: 1 MDMEATADQMVTLLSVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQTFFLVVATFAFGVAFGARGVWTYVGLLLHSVGVHWLLCGVVMSSLCRWIANSRLLQHRSHSVEQEVEWMYALDIHSNSFFPLFVCLYVVQLLLLPLLVGQSVWSLILANTLYAVAFSVYFYVTHLGYRSLPFLHTTEVFLYPVVGIIMLLLLSIILLPFGIRINATLAMAKLYF 220
BLAST of mRNA_P-wetherbeei_contig14877.1.1 vs. uniprot
Match: A0A835Z945_9STRA (UNC-50 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z945_9STRA) HSP 1 Score: 294 bits (753), Expect = 8.540e-97 Identity = 149/220 (67.73%), Postives = 180/220 (81.82%), Query Frame = 1
Query: 1 MDLEATCDQMITLLTINPERVYKTAYYRKQTKNHWARDDPGFAVLQALFLMVAAVAFGVVFRLRGFWHYLWLVVHAVALHWLLFGVMAASLGRWLANGYLLQHRSHSVEQVVEWLYAFDIHCNSFFPLFILLYVVQFLLLPVLLGKSFLALILSNTLYAVAFSLYFYVSHLGYRALPFLSRTEVFLYPVGAVLLLLALTIVLHPLGLGLNMTRVMAHVYF 660
+D+E+ CDQM+TLL++NP RVYKTAYYRKQTKN WARDDP FAVLQ F + AVA+G+ F LR FW Y+ L+ +AV LHWLLFGV AA+ GR LAN ++L R+HSVEQ VEWLYAFDIHCN+FF LFI++YV QFLLLPVLLG S AL+LSN LYA+ F YFY++HLGYR+LPFL +TE FLYPV AV+ LLA +++L LG+ +NMTRVMAHVYF
Sbjct: 39 LDMESACDQMVTLLSLNPGRVYKTAYYRKQTKNQWARDDPAFAVLQLAFSVAGAVAYGMAFGLRAFWGYIALIANAVLLHWLLFGVAAATAGRALANAHMLVRRAHSVEQRVEWLYAFDIHCNAFFMLFIVVYVGQFLLLPVLLGPSVGALLLSNALYALGFGAYFYITHLGYRSLPFLCKTETFLYPVVAVVTLLATSVLLAALGMRVNMTRVMAHVYF 258
BLAST of mRNA_P-wetherbeei_contig14877.1.1 vs. uniprot
Match: A0A7R9YBX5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBX5_9STRA) HSP 1 Score: 251 bits (641), Expect = 7.230e-80 Identity = 127/213 (59.62%), Postives = 164/213 (77.00%), Query Frame = 1
Query: 1 MDLEATCDQMITLLTINPERVYKTAYYRKQTKNHWARDDPGFAVLQALFLMVAAVAFGVVFRLRGFWHYLWLVVHAVALHWLLFGVMAASLGRWLANGYLLQHRSHSVEQVVEWLYAFDIHCNSFFPLFILLYVVQFLLLPVLLGKSFLALILSNTLYAVAFSLYFYVSHLGYRALPFLSRTEVFLYPVGAVLLLLALTIVLHPLGLGLNMTR 639
MD EAT DQM+TL + +P RVYKT +YRKQ KN WARDDP FAV Q L L V AVA+ + FR+ YL L+++ V + W LFG + A++G ++AN YLLQ SHSV Q VEWLYAFDIHCN+FFPLF+L++V+QF LLP+LL K + ++ILSN LYA AFS+YFY++HLGYRALPFL++TEV+LYP+G V L L++ + PLG+ +N TR
Sbjct: 40 MDFEATLDQMLTLASSDPGRVYKTNFYRKQMKNQWARDDPAFAVAQVLLLSVVAVAYALAFRVDSLSGYLSLILYCVVVDWFLFGCVVATIGWFVANKYLLQSHSHSVAQKVEWLYAFDIHCNAFFPLFLLVHVLQFFLLPILLLKVYPSMILSNLLYAAAFSVYFYITHLGYRALPFLTKTEVYLYPIGVVALAFVLSLFIAPLGVRINATR 252
BLAST of mRNA_P-wetherbeei_contig14877.1.1 vs. uniprot
Match: A0A1E7FEU6_9STRA (UNC-50 protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEU6_9STRA) HSP 1 Score: 247 bits (631), Expect = 1.400e-78 Identity = 127/226 (56.19%), Postives = 168/226 (74.34%), Query Frame = 1
Query: 1 MDLEATCDQMITLLTINPERVYKTAYYRKQTKNHWARDDPGFAVLQALFLMVAAVAFGVVFRLR-----GFWHYLWLVVHAVALHWLLFGVMAASLGRWLANGYLLQHRSHS-VEQVVEWLYAFDIHCNSFFPLFILLYVVQFLLLPVLLGKSFLALILSNTLYAVAFSLYFYVSHLGYRALPFLSRTEVFLYPVGAVLLLLALTIVLHPLGLGLNMTRVMAHVYF 660
MD+++ DQM T+L+ P VYKTAYYRKQTKNHWARDDP FA L+ +FL V+ +A+ + FR+ FW Y +V +WL G + A++GR +AN +L H+S S V Q VEWLYAFDIHCN+FFP+F+LLY VQF LLP++LGKS +L++SNTLYA F+ Y+Y++HLGYRALPFLS+TEVFL+PV A+ L+ L +V +P GLG N +R+MAH+YF
Sbjct: 20 MDIQSALDQMKTILSTRPHVVYKTAYYRKQTKNHWARDDPAFAALEFIFLTVSCIAYAISFRVPVTEGIAFWLY------SVLFNWLGLGFIIATVGREMANRHLTDHKSTSHVRQSVEWLYAFDIHCNAFFPVFVLLYGVQFFLLPLVLGKSLFSLVVSNTLYAAGFAWYWYITHLGYRALPFLSQTEVFLFPVAAIALVFVLNLVGYPFGLGWNASRIMAHIYF 239
BLAST of mRNA_P-wetherbeei_contig14877.1.1 vs. uniprot
Match: A0A448ZP33_9STRA (Uncharacterized protein n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448ZP33_9STRA) HSP 1 Score: 246 bits (627), Expect = 1.640e-77 Identity = 127/224 (56.70%), Postives = 170/224 (75.89%), Query Frame = 1
Query: 1 MDLEATCDQMITLLTINPERVYKTAYYRKQTKNHWARDDPGFAVLQALFLMVAAVAFGVVFRL---RGFWHYLWLVVHAVALHWLLFGVMAASLGRWLANGYLLQHRSHS-VEQVVEWLYAFDIHCNSFFPLFILLYVVQFLLLPVLLGKSFLALILSNTLYAVAFSLYFYVSHLGYRALPFLSRTEVFLYPVGAVLLLLALTIVLHPLGLGLNMTRVMAHVYF 660
MD+++ DQM TLL+ P VYKT+YYRKQTKNHWARDDP FA L+ +FL ++ +A+ + FR+ G +L ++V HWL FG++ A+ GR +AN +L +S+S V Q VEWLYAFDIHCN+FFP+F+LLY VQF LLP++LGKS ALI SNTLYA AF+ Y+Y++HLGYRALPFLS+TEVFL+P+ A+ L+ L +V +P G+G N +R+MAH+YF
Sbjct: 53 MDIQSALDQMKTLLSTRPHVVYKTSYYRKQTKNHWARDDPAFAALELIFLTISCIAYAISFRVPISEGIAFFL----YSVLFHWLGFGLIIATAGREMANRHLTDTKSNSHVRQSVEWLYAFDIHCNAFFPVFVLLYGVQFFLLPLVLGKSLFALIASNTLYAGAFAWYWYITHLGYRALPFLSQTEVFLFPIAAIGLVYVLNLVGYPFGMGWNASRIMAHIYF 272
BLAST of mRNA_P-wetherbeei_contig14877.1.1 vs. uniprot
Match: A0A7S2U7N4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U7N4_9STRA) HSP 1 Score: 246 bits (627), Expect = 2.720e-77 Identity = 125/228 (54.82%), Postives = 168/228 (73.68%), Query Frame = 1
Query: 1 MDLEATCDQMITLLTINPERVYKTAYYRKQTKNHWARDDPGFAVLQALFLMVAAVAFGVVFR-------LRGFWHYLWLVVHAVALHWLLFGVMAASLGRWLANGYLLQHRSHS-VEQVVEWLYAFDIHCNSFFPLFILLYVVQFLLLPVLLGKSFLALILSNTLYAVAFSLYFYVSHLGYRALPFLSRTEVFLYPVGAVLLLLALTIVLHPLGLGLNMTRVMAHVYF 660
MD+++ DQM TL T++P+RVYKT+YYRKQTKNHWARDDP F LQ +FL +A++A+ V FR GF + ++ ++W G++ AS+GR AN +L H+S S V Q VEWLYAFDIHCN+FFPLF+ LY +QF LLP++LGKS L+L+L+NTLYA AFS YFY++HLGYRALPFLS TEVFL+P+ ++++ + +V +P G G N +R+MAH YF
Sbjct: 67 MDVQSALDQMRTLCTLSPQRVYKTSYYRKQTKNHWARDDPAFCFLQMVFLALASIAYCVAFREDSLVSSTIGF------AIKSILINWFGLGILIASIGREFANRHLTVHQSSSHVRQGVEWLYAFDIHCNAFFPLFVALYGLQFFLLPIVLGKSLLSLVLANTLYAAAFSWYFYITHLGYRALPFLSSTEVFLFPIAGIMIVYLINLVGYPFGFGWNASRIMAHFYF 288
BLAST of mRNA_P-wetherbeei_contig14877.1.1 vs. uniprot
Match: A0A7S1Y6X4_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y6X4_9STRA) HSP 1 Score: 241 bits (616), Expect = 2.780e-76 Identity = 125/220 (56.82%), Postives = 164/220 (74.55%), Query Frame = 1
Query: 1 MDLEATCDQMITLLTINPERVYKTAYYRKQTKNHWARDDPGFAVLQALFLMVAAVAFGVVFRLRGFWHYLWLVVHAVALHWLLFGVMAASLGRWLANGYLLQHRSHS-VEQVVEWLYAFDIHCNSFFPLFILLYVVQFLLLPVLLGKSFLALILSNTLYAVAFSLYFYVSHLGYRALPFLSRTEVFLYPVGAVLLLLALTIVLHPLGLGLNMTRVMAHVY 657
MD ++ DQM +LL P VYKTAYYRKQTKNHWARDDP F VLQA+FL+V+ VA+ V F+ +L ++H++ +WL+ G + S+ R +AN +L H+S S V Q VEWLYAFDIHCN+FFPLF +LY VQF LLP++LG SFLAL+++NTLYAVAFS Y+Y++HLGYR+LPFL+ TEVF++P+ AV+LL L +V +P G N RV A +Y
Sbjct: 20 MDAQSALDQMKSLLGSRPHTVYKTAYYRKQTKNHWARDDPAFCVLQAIFLLVSVVAYSVAFK-ASIGTFLGFLIHSLFWNWLVSGALVCSILREVANRHLTVHQSTSHVRQSVEWLYAFDIHCNAFFPLFCVLYGVQFFLLPLILGNSFLALVVANTLYAVAFSWYWYITHLGYRSLPFLTNTEVFMFPIAAVILLFVLNLVGYPFNFGWNFARVFAQIY 238
BLAST of mRNA_P-wetherbeei_contig14877.1.1 vs. uniprot
Match: A0A7S1GMY0_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GMY0_CYCTE) HSP 1 Score: 239 bits (611), Expect = 1.990e-75 Identity = 128/222 (57.66%), Postives = 166/222 (74.77%), Query Frame = 1
Query: 1 MDLEATCDQMITLLTINPERVYKTAYYRKQTKNHWARDDPGFAVLQALFLMVAAVAFGVVFR--LRGFWHYLWLVVHAVALHWLLFGVMAASLGRWLANGYLLQHRSHS-VEQVVEWLYAFDIHCNSFFPLFILLYVVQFLLLPVLLGKSFLALILSNTLYAVAFSLYFYVSHLGYRALPFLSRTEVFLYPVGAVLLLLALTIVLHPLGLGLNMTRVMAHVY 657
MD+++ DQM +LL P VYKT+YYRKQTKNHWARDDP F VLQA+FL VA++A+ V FR L G +L +H + +WL+ G + A++ R LAN +L H+S S V+Q VEWLYAFDIHCN+FFPLF LLY VQF LLP++LGKS LA +LSNTLYA AFS Y+Y++HLGYRALPFLS TEVFL+P+ + L+ L +V +P +G N +R++A +Y
Sbjct: 31 MDIQSALDQMRSLLGGRPHVVYKTSYYRKQTKNHWARDDPAFCVLQAVFLFVASLAYAVAFRSTLSGGMGFL---LHTILWNWLVAGTIVATIARELANRHLCVHQSTSHVKQTVEWLYAFDIHCNAFFPLFCLLYGVQFFLLPLVLGKSLLAFLLSNTLYAAAFSWYWYITHLGYRALPFLSNTEVFLFPIAGIALVFVLNLVGYPFDMGWNASRLLATIY 249
BLAST of mRNA_P-wetherbeei_contig14877.1.1 vs. uniprot
Match: A0A7S2ENT4_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ENT4_TRICV) HSP 1 Score: 239 bits (611), Expect = 1.400e-74 Identity = 128/225 (56.89%), Postives = 165/225 (73.33%), Query Frame = 1
Query: 1 MDLEATCDQMITLLTINPERVYKTAYYRKQTKNHWARDDPGFAVLQALFLMVAAVAFGVVFRLRGFWHYLWLVV----HAVALHWLLFGVMAASLGRWLANGYLLQHRSHS-VEQVVEWLYAFDIHCNSFFPLFILLYVVQFLLLPVLLGKSFLALILSNTLYAVAFSLYFYVSHLGYRALPFLSRTEVFLYPVGAVLLLLALTIVLHPLGLGLNMTRVMAHVYF 660
MD ++ DQM TLLT P+RVYKTAYYRKQTKNHWARDDP FA LQ FL VA++A+ V F G L + ++ ++WL G++ AS+ R ++N +L+ H S + V Q VE+LYAFDIHCN+FFPLF+L+Y VQF LLPV+LG+ +AL+LSN L+A AF YFYV+HLGYRALPFL+ TEVFL+PV V+LL L ++ HP G G N +R+MA+VYF
Sbjct: 86 MDFQSALDQMKTLLTPQPQRVYKTAYYRKQTKNHWARDDPAFAALQIAFLSVASLAYSVAFGSDGLGGTLTAALGFGLKSILINWLAVGLVTASVCRSISNNHLVVHSSAAHVRQRVEFLYAFDIHCNAFFPLFVLIYGVQFFLLPVVLGRGLMALLLSNALFAAAFGWYFYVTHLGYRALPFLTNTEVFLFPVALVVLLFFLNLIGHPFGFGWNASRIMAYVYF 310
BLAST of mRNA_P-wetherbeei_contig14877.1.1 vs. uniprot
Match: A0A6V1WU61_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WU61_HETAK) HSP 1 Score: 236 bits (603), Expect = 4.880e-74 Identity = 118/220 (53.64%), Postives = 160/220 (72.73%), Query Frame = 1
Query: 1 MDLEATCDQMITLLTINPERVYKTAYYRKQTKNHWARDDPGFAVLQALFLMVAAVAFGVVFRLRGFWHYLWLVVHAVALHWLLFGVMAASLGRWLANGYLLQHRSHSVEQVVEWLYAFDIHCNSFFPLFILLYVVQFLLLPVLLGKSFLALILSNTLYAVAFSLYFYVSHLGYRALPFLSRTEVFLYPVGAVLLLLALTIVLHPLGLGLNMTRVMAHVYF 660
MD EA DQ +TLL+ NP +VYK++YYRKQTKN WARDDP FAV+Q L L+ +A A+GV F FWH+ ++ V + ++ GV ASLG W AN L Q R+ +V Q VEW +A+D HCN+ P F+LL+VVQ+ LLP+L+G+S+LAL +NTLYA + Y YV+HLGYRALPFLS TEV+LYP G ++LL ++++L +G+ NMTR+++H YF
Sbjct: 38 MDFEAAFDQFMTLLSRNPAQVYKSSYYRKQTKNQWARDDPAFAVIQILLLIASACAYGVAFSAGSFWHFFTIIFKMVGIQYVGVGVFIASLGSWFANARLRQVRAGTVAQRVEWAFAWDAHCNAHAPAFLLLHVVQYFLLPLLMGRSWLALAAANTLYAASLLAYVYVTHLGYRALPFLSNTEVYLYPAGVIILLYVISLLLGLVGVSCNMTRIVSHFYF 257 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14877.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14877.1.1 >prot_P-wetherbeei_contig14877.1.1 ID=prot_P-wetherbeei_contig14877.1.1|Name=mRNA_P-wetherbeei_contig14877.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=222bp MDLEATCDQMITLLTINPERVYKTAYYRKQTKNHWARDDPGFAVLQALFLback to top mRNA from alignment at P-wetherbeei_contig14877:38..1592+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14877.1.1 ID=mRNA_P-wetherbeei_contig14877.1.1|Name=mRNA_P-wetherbeei_contig14877.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1555bp|location=Sequence derived from alignment at P-wetherbeei_contig14877:38..1592+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14877:38..1592+ >mRNA_P-wetherbeei_contig14877.1.1 ID=mRNA_P-wetherbeei_contig14877.1.1|Name=mRNA_P-wetherbeei_contig14877.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=666bp|location=Sequence derived from alignment at P-wetherbeei_contig14877:38..1592+ (Phaeothamnion wetherbeei SAG_119_79)back to top |