mRNA_P-wetherbeei_contig14862.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14862.1.1 vs. uniprot
Match: D8LQQ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQQ4_ECTSI) HSP 1 Score: 171 bits (434), Expect = 2.030e-50 Identity = 89/151 (58.94%), Postives = 106/151 (70.20%), Query Frame = 1
Query: 1 QHLQNERVDEELWYSRLPAEEITHMQEHPNPPLFATLRMSQVLARSMANRATVTTTAXXXXXAASAVWYRIELERQISSLVDYLGMCERILGTPVPRSYSRHTSRFLTFYCLTLPVVLVPHTELFTAPIVGAVCWGLMSIEEIAYTIEQPF 453
QHLQ+ER D E+ +SRLP + +QE PNPPL+ M ++LAR+ + + S V YR+++E +S LVD LG CERI+ TPVPR YSRHTSRFLT Y TLPVVLVPHTELFTAP+V AVCWGL SIEEIAY IEQPF
Sbjct: 131 QHLQDERDDAEMDWSRLPEGTVARLQEDPNPPLYCCQIMMEILARACSEGGAAQSPGGRVPDYTS-VMYRVQIEEGLSFLVDALGKCERIVTTPVPRGYSRHTSRFLTVYGFTLPVVLVPHTELFTAPVVAAVCWGLFSIEEIAYFIEQPF 280
BLAST of mRNA_P-wetherbeei_contig14862.1.1 vs. uniprot
Match: A0A6H5KGP9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGP9_9PHAE) HSP 1 Score: 171 bits (432), Expect = 8.170e-48 Identity = 89/151 (58.94%), Postives = 106/151 (70.20%), Query Frame = 1
Query: 1 QHLQNERVDEELWYSRLPAEEITHMQEHPNPPLFATLRMSQVLARSMANRATVTTTAXXXXXAASAVWYRIELERQISSLVDYLGMCERILGTPVPRSYSRHTSRFLTFYCLTLPVVLVPHTELFTAPIVGAVCWGLMSIEEIAYTIEQPF 453
QHLQ+ER D E+ +SRLP + +QE PNPPL+ M ++LAR+ + + S V YR+++E +S LVD LG CERIL TPVPR YSRHTSRFLT Y TLP+VLVPHTELFTAP+V AVCWGL SIEEIAY IEQPF
Sbjct: 228 QHLQDERNDAEMDWSRLPEITVARLQEDPNPPLYCCQIMMEILARACSEGKAAQSPGGRVPDFTS-VMYRVQIEEGLSFLVDALGKCERILTTPVPRGYSRHTSRFLTVYGFTLPLVLVPHTELFTAPVVAAVCWGLFSIEEIAYFIEQPF 377
BLAST of mRNA_P-wetherbeei_contig14862.1.1 vs. uniprot
Match: A0A836CJD6_9STRA (Bestrophin, RFP-TM, chloride channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJD6_9STRA) HSP 1 Score: 152 bits (384), Expect = 1.730e-40 Identity = 79/151 (52.32%), Postives = 100/151 (66.23%), Query Frame = 1
Query: 1 QHLQNERVDEELWYSRLPAEEITHMQEHPNPPLFATLRMSQVLARSMANRATVTTTAXXXXXAASAVWYRIELERQISSLVDYLGMCERILGTPVPRSYSRHTSRFLTFYCLTLPVVLVPHTELFTAPIVGAVCWGLMSIEEIAYTIEQPF 453
QHLQ+ R D E + LP E+ + +PNPPL A RM+QV+ + ++V YR+++E ++ LVD+LGMCERIL TPVPRSYSRHTSRFLT Y TLP+VLV HT +TA +VG +CWGL+SIE IAY IEQPF
Sbjct: 379 QHLQDTRDDTEFKWLALPESELELLLSNPNPPLMACERMTQVIQLAYGTCGGSGVNGGRCREDDTSVAYRLQMEVEVGKLVDFLGMCERILTTPVPRSYSRHTSRFLTVYLFTLPMVLVGHTGYWTAAVVGLICWGLLSIEGIAYYIEQPF 529
BLAST of mRNA_P-wetherbeei_contig14862.1.1 vs. uniprot
Match: H6WBA7_VAULI (Uncharacterized protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBA7_VAULI) HSP 1 Score: 145 bits (365), Expect = 5.150e-39 Identity = 82/153 (53.59%), Postives = 101/153 (66.01%), Query Frame = 1
Query: 1 QHLQNERVDEEL-WY-SRLPAEEITHMQEHPNPPLFATLRMSQVLARSMANRATVTTTAXXXXXAASAVWYRIELERQISSLVDYLGMCERILGTPVPRSYSRHTSRFLTFYCLTLPVVLVPHTELFTAPIVGAVCWGLMSIEEIAYTIEQPF 453
QHLQN R DEEL W +RLP E ++Q +PNPPL RMSQ+L T + + V+YRI++E I+ L D +G+CERIL TPVPRSYSRHTSR LT + LTLP+VLVPHTE T +V + WG++SIE IAY IEQPF
Sbjct: 184 QHLQNTRNDEELDWLKARLPKYEFENIQSNPNPPLLVLQRMSQILG---------TLFPPSSKPSQAKVFYRIKIEECINLLSDCVGLCERILNTPVPRSYSRHTSRLLTVFLLTLPIVLVPHTEFGTPLVVLLMGWGMLSIEGIAYLIEQPF 327
BLAST of mRNA_P-wetherbeei_contig14862.1.1 vs. uniprot
Match: A0A7S2V524_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V524_9STRA) HSP 1 Score: 120 bits (300), Expect = 1.310e-29 Identity = 72/152 (47.37%), Postives = 93/152 (61.18%), Query Frame = 1
Query: 1 QHLQNER-VDEELWYSRLPAEEITHMQEHPNPPLFATLRMSQVLARSMANRATVTTTAXXXXXAASAVWYRIELERQISSLVDYLGMCERILGTPVPRSYSRHTSRFLTFYCLTLPVVLVPHTELFTAPIVGAVCWGLMSIEEIAYTIEQPF 453
QHLQN+ ++E +S L +EE++ + NPPL RM +VLA + +R +TT YR L+ +I+ L+D+LGMCERI TPVP SYSRHTSRFLT Y TLP VLV T +V +CWGL SIEEI + IE+PF
Sbjct: 187 QHLQNDPDLNEVKAFSTLTSEELSTLVLDANPPLRVCQRMGEVLALNYEDRDDITTFN-----------YRTYLDNEITKLIDFLGMCERIKLTPVPLSYSRHTSRFLTLYMATLPFVLVNIAGNMTPFVVLGMCWGLFSIEEIGHYIEEPF 327
BLAST of mRNA_P-wetherbeei_contig14862.1.1 vs. uniprot
Match: A0A7S2V5N3_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5N3_9STRA) HSP 1 Score: 116 bits (291), Expect = 2.430e-28 Identity = 69/152 (45.39%), Postives = 87/152 (57.24%), Query Frame = 1
Query: 1 QHLQ-NERVDEELWYSRLPAEEITHMQEHPNPPLFATLRMSQVLARSMANRATVTTTAXXXXXAASAVWYRIELERQISSLVDYLGMCERILGTPVPRSYSRHTSRFLTFYCLTLPVVLVPHTELFTAPIVGAVCWGLMSIEEIAYTIEQPF 453
QHLQ + VDE +S L EE+ + NPPL RM +VLA + +R + A YR LE +I+ +D++GMCERI TPVP SYSRHTSRFLT Y TLP VL T +V +CWGL SIE+I + IE+PF
Sbjct: 184 QHLQCDPDVDEVAAFSTLSREELESLCNDANPPLRVAQRMGEVLALNFQDRDDI-----------MAFQYRTYLEGEITKFIDFMGMCERIKLTPVPLSYSRHTSRFLTLYMATLPFVLTKFCGNLTPVVVLGMCWGLFSIEQIGHYIEEPF 324
BLAST of mRNA_P-wetherbeei_contig14862.1.1 vs. uniprot
Match: W7TTZ2_9STRA (Bestrophin-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TTZ2_9STRA) HSP 1 Score: 118 bits (295), Expect = 2.520e-28 Identity = 66/150 (44.00%), Postives = 92/150 (61.33%), Query Frame = 1
Query: 4 HLQNERVDEELWYSRLPAEEITHMQEHPNPPLFATLRMSQVLARSMANRATVTTTAXXXXXAASAVWYRIELERQISSLVDYLGMCERILGTPVPRSYSRHTSRFLTFYCLTLPVVLVPHTELFTAPIVGAVCWGLMSIEEIAYTIEQPF 453
HLQ V EL + LP+ E ++ PP ++++ ++ ++++ A + +Y + LE+ + LV+ LGM ERIL TPVP SYSRHTSRFL+ Y LTLP VLV E+FTAP++G VCWGL SIEEI + IE+PF
Sbjct: 279 HLQRNIVSTEL-ETLLPSWEADQVRMDTCPPALVCMKLTYLINEAVSHN------------EARSDFYALYLEQLVGDLVNCLGMAERILLTPVPASYSRHTSRFLSLYTLTLPFVLVHQLEIFTAPVLGIVCWGLFSIEEIGHLIEEPF 415
BLAST of mRNA_P-wetherbeei_contig14862.1.1 vs. uniprot
Match: M2Y919_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y919_GALSU) HSP 1 Score: 107 bits (268), Expect = 4.270e-25 Identity = 56/133 (42.11%), Postives = 77/133 (57.89%), Query Frame = 1
Query: 55 AEEITHMQEHPNPPLFATLRMSQVLARSMANRATVTTTAXXXXXAASAVWYRIELERQISSLVDYLGMCERILGTPVPRSYSRHTSRFLTFYCLTLPVVLVPHTELFTAPIVGAVCWGLMSIEEIAYTIEQPF 453
A+EI H PNPPLF ++S + + V + V R ++E Q+SSL++ L CERI+ TPVP YSRHTSRFL+ +C T P+++V H + T P+ VCW L +IEEI + IE PF
Sbjct: 211 ADEIVHS---PNPPLFVLFQLSMQIKAAFRETTNV----------SDWVVQRAKMEWQLSSLMEVLSGCERIITTPVPLGYSRHTSRFLSLWCFTFPLLVVSHFKFLTVPVTAFVCWSLFAIEEIGHVIEDPF 330
BLAST of mRNA_P-wetherbeei_contig14862.1.1 vs. uniprot
Match: A0A7S1JXH1_9ALVE (Hypothetical protein (Fragment) n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1JXH1_9ALVE) HSP 1 Score: 101 bits (251), Expect = 9.520e-24 Identity = 50/81 (61.73%), Postives = 57/81 (70.37%), Query Frame = 1
Query: 211 IELERQISSLVDYLGMCERILGTPVPRSYSRHTSRFLTFYCLTLPVVLVPHTELFTAPIVGAVCWGLMSIEEIAYTIEQPF 453
I LE I L + LG CERI+ TPVP SYSRHTSRFLT YCLTLPVVLV + T P+V +CWG +IEEI + IE PF
Sbjct: 14 IWLENIIGHLSEALGGCERIMKTPVPLSYSRHTSRFLTLYCLTLPVVLVQSLQWMTIPVVTFMCWGFKAIEEIGHFIEDPF 94
BLAST of mRNA_P-wetherbeei_contig14862.1.1 vs. uniprot
Match: A0A0G4EJC8_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EJC8_VITBC) HSP 1 Score: 103 bits (258), Expect = 2.700e-23 Identity = 69/155 (44.52%), Postives = 83/155 (53.55%), Query Frame = 1
Query: 1 QHLQNERVDE---ELWYSRLPAEEITHMQEHPNPPLFATLRMSQVLARSM-ANRATVTTTAXXXXXAASAVWYRIELERQISSLVDYLGMCERILGTPVPRSYSRHTSRFLTFYCLTLPVVLVPHTELFTAPIVGAVCWGLMSIEEIAYTIEQPF 453
QHLQ VD W + AE + ++ NPPL MS +M +R T T +W LE I L + LG CERI+ TPVP SYSRHTSRFLT YCLTLPVVLV + T P+V +CWG +IEEI + IE PF
Sbjct: 176 QHLQGGEVDMAEVSRWITPNDAEALRQVR---NPPLLICKLMSGTCHEAMEVSRDTKPT-------ERQLIW----LENIIGHLSEALGGCERIMKTPVPLSYSRHTSRFLTLYCLTLPVVLVQSLQWMTIPVVTFMCWGFKAIEEIGHFIEDPF 316 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14862.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14862.1.1 >prot_P-wetherbeei_contig14862.1.1 ID=prot_P-wetherbeei_contig14862.1.1|Name=mRNA_P-wetherbeei_contig14862.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=151bp QHLQNERVDEELWYSRLPAEEITHMQEHPNPPLFATLRMSQVLARSMANRback to top mRNA from alignment at P-wetherbeei_contig14862:202..1434+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14862.1.1 ID=mRNA_P-wetherbeei_contig14862.1.1|Name=mRNA_P-wetherbeei_contig14862.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1233bp|location=Sequence derived from alignment at P-wetherbeei_contig14862:202..1434+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14862:202..1434+ >mRNA_P-wetherbeei_contig14862.1.1 ID=mRNA_P-wetherbeei_contig14862.1.1|Name=mRNA_P-wetherbeei_contig14862.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=453bp|location=Sequence derived from alignment at P-wetherbeei_contig14862:202..1434+ (Phaeothamnion wetherbeei SAG_119_79)back to top |