prot_P-wetherbeei_contig1486.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1486.1.1
Unique Nameprot_P-wetherbeei_contig1486.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length67
Homology
BLAST of mRNA_P-wetherbeei_contig1486.1.1 vs. uniprot
Match: A0A835YKD0_9STRA (Putative 40S ribosomal protein RPS29 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKD0_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 2.290e-26
Identity = 43/56 (76.79%), Postives = 46/56 (82.14%), Query Frame = 0
Query:    1 MPAKALQNSHPKVHSKGGRHCRTCGNQCGIIRKYGINMCRQCFRHYANDIGFHKVS 56
            M AKALQNSHPK + KGG  CR C NQ GII+KYGINMCRQCFR YA DIGFHK+S
Sbjct:    1 MGAKALQNSHPKAYGKGGNKCRVCANQHGIIKKYGINMCRQCFRTYAYDIGFHKLS 56          
BLAST of mRNA_P-wetherbeei_contig1486.1.1 vs. uniprot
Match: D7FJK2_ECTSI (Similar to ribosomal protein S29 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJK2_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 4.610e-22
Identity = 39/56 (69.64%), Postives = 43/56 (76.79%), Query Frame = 0
Query:    1 MPAKALQNSHPKVHSKGGRHCRTCGNQCGIIRKYGINMCRQCFRHYANDIGFHKVS 56
            M +KAL NSHPK   KGGRHCR C NQ G+IRKYG+ MCRQCFR YA +IGF K S
Sbjct:   43 MGSKALVNSHPKSFGKGGRHCRVCSNQHGLIRKYGLYMCRQCFRVYATEIGFTKFS 98          
BLAST of mRNA_P-wetherbeei_contig1486.1.1 vs. uniprot
Match: A0A7J7QR56_9CHLO (40S ribosomal protein S29 (Fragment) n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QR56_9CHLO)

HSP 1 Score: 86.7 bits (213), Expect = 3.370e-21
Identity = 37/54 (68.52%), Postives = 42/54 (77.78%), Query Frame = 0
Query:    1 MPAKALQNSHPKVHSKGGRHCRTCGNQCGIIRKYGINMCRQCFRHYANDIGFHK 54
            M  +A+ NSHPK + KGGR CR C NQ GIIRKY +N+CRQCFR YANDIGF K
Sbjct:    1 MGHEAVWNSHPKDYGKGGRKCRVCSNQGGIIRKYNLNICRQCFREYANDIGFIK 54          
BLAST of mRNA_P-wetherbeei_contig1486.1.1 vs. uniprot
Match: A0A1X2J2J3_9FUNG (40S ribosomal protein S29 n=5 Tax=Mucorales TaxID=4827 RepID=A0A1X2J2J3_9FUNG)

HSP 1 Score: 86.3 bits (212), Expect = 5.990e-21
Identity = 34/50 (68.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query:    8 NSHPKVHSKGGRHCRTCGNQCGIIRKYGINMCRQCFRHYANDIGFHKVSE 57
            NS PK + KG R CR C +Q G+IRKY +N+CRQCFR YANDIGFHKV E
Sbjct:    8 NSRPKTYGKGSRQCRVCAHQAGLIRKYNLNICRQCFREYANDIGFHKVRE 57          
BLAST of mRNA_P-wetherbeei_contig1486.1.1 vs. uniprot
Match: A0A1Y2BNQ1_9FUNG (40S ribosomal protein S29 n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2BNQ1_9FUNG)

HSP 1 Score: 85.9 bits (211), Expect = 7.140e-21
Identity = 36/54 (66.67%), Postives = 42/54 (77.78%), Query Frame = 0
Query:    1 MPAKALQNSHPKVHSKGGRHCRTCGNQCGIIRKYGINMCRQCFRHYANDIGFHK 54
            M   A+ NSHPK +SKGGR CR C +Q G+IRKYG+N+CRQCFR YA DIGF K
Sbjct:    1 MAHAAVWNSHPKNNSKGGRQCRVCSHQAGLIRKYGLNLCRQCFREYAADIGFVK 54          
BLAST of mRNA_P-wetherbeei_contig1486.1.1 vs. uniprot
Match: A9S9B9_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9S9B9_PHYPA)

HSP 1 Score: 86.3 bits (212), Expect = 9.140e-21
Identity = 37/58 (63.79%), Postives = 42/58 (72.41%), Query Frame = 0
Query:    1 MPAKALQNSHPKVHSKGGRHCRTCGNQCGIIRKYGINMCRQCFRHYANDIGFHKVSER 58
            M  +A+ NSHPK +  G R CR CGN CG+IRKYGIN CRQCFR Y+ DIGF KV  R
Sbjct:    1 MGHEAVWNSHPKGYGPGSRTCRVCGNSCGMIRKYGINTCRQCFRIYSKDIGFVKVLSR 58          
BLAST of mRNA_P-wetherbeei_contig1486.1.1 vs. uniprot
Match: A0A1X2GL87_9FUNG (40S ribosomal protein S29 n=3 Tax=Mucorales TaxID=4827 RepID=A0A1X2GL87_9FUNG)

HSP 1 Score: 85.5 bits (210), Expect = 1.240e-20
Identity = 33/49 (67.35%), Postives = 40/49 (81.63%), Query Frame = 0
Query:    8 NSHPKVHSKGGRHCRTCGNQCGIIRKYGINMCRQCFRHYANDIGFHKVS 56
            NSHP+ + KG R CR C ++ G+IRKY +N+CRQCFR YANDIGFHKVS
Sbjct:    8 NSHPRGYGKGSRQCRVCAHRAGLIRKYNLNICRQCFREYANDIGFHKVS 56          
BLAST of mRNA_P-wetherbeei_contig1486.1.1 vs. uniprot
Match: A0A061RP44_9CHLO (Small subunit ribosomal protein S29e n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RP44_9CHLO)

HSP 1 Score: 85.1 bits (209), Expect = 1.440e-20
Identity = 34/48 (70.83%), Postives = 39/48 (81.25%), Query Frame = 0
Query:    8 NSHPKVHSKGGRHCRTCGNQCGIIRKYGINMCRQCFRHYANDIGFHKV 55
            NSHPK + KG R CR CGNQ G+IRKYG+N+CRQCFR YA DIGF K+
Sbjct:    8 NSHPKGYGKGSRSCRVCGNQHGLIRKYGLNICRQCFREYAKDIGFQKM 55          
BLAST of mRNA_P-wetherbeei_contig1486.1.1 vs. uniprot
Match: A9SH93_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9SH93_PHYPA)

HSP 1 Score: 85.1 bits (209), Expect = 1.950e-20
Identity = 36/55 (65.45%), Postives = 41/55 (74.55%), Query Frame = 0
Query:    1 MPAKALQNSHPKVHSKGGRHCRTCGNQCGIIRKYGINMCRQCFRHYANDIGFHKV 55
            M  +A+ NSHPK +  G R CR CGN CG+IRKYGIN CRQCFR Y+ DIGF KV
Sbjct:    1 MGHEAVWNSHPKGYGPGSRTCRVCGNSCGMIRKYGINTCRQCFRIYSKDIGFVKV 55          
BLAST of mRNA_P-wetherbeei_contig1486.1.1 vs. uniprot
Match: A0A0D2K9S9_9CHLO (40S ribosomal protein S29 n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2K9S9_9CHLO)

HSP 1 Score: 84.7 bits (208), Expect = 2.050e-20
Identity = 37/54 (68.52%), Postives = 42/54 (77.78%), Query Frame = 0
Query:    1 MPAKALQNSHPKVHSKGGRHCRTCGNQCGIIRKYGINMCRQCFRHYANDIGFHK 54
            M  + + NSHPK +SKGGR CR CGN  GIIRKYG+N+CRQCFR YA DIGF K
Sbjct:    1 MGFENVWNSHPKDYSKGGRTCRVCGNGGGIIRKYGLNICRQCFRDYAKDIGFVK 54          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1486.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YKD0_9STRA2.290e-2676.79Putative 40S ribosomal protein RPS29 n=1 Tax=Tribo... [more]
D7FJK2_ECTSI4.610e-2269.64Similar to ribosomal protein S29 n=1 Tax=Ectocarpu... [more]
A0A7J7QR56_9CHLO3.370e-2168.5240S ribosomal protein S29 (Fragment) n=1 Tax=Scene... [more]
A0A1X2J2J3_9FUNG5.990e-2168.0040S ribosomal protein S29 n=5 Tax=Mucorales TaxID=... [more]
A0A1Y2BNQ1_9FUNG7.140e-2166.6740S ribosomal protein S29 n=1 Tax=Rhizoclosmatium ... [more]
A9S9B9_PHYPA9.140e-2163.79Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
A0A1X2GL87_9FUNG1.240e-2067.3540S ribosomal protein S29 n=3 Tax=Mucorales TaxID=... [more]
A0A061RP44_9CHLO1.440e-2070.83Small subunit ribosomal protein S29e n=1 Tax=Tetra... [more]
A9SH93_PHYPA1.950e-2065.45Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
A0A0D2K9S9_9CHLO2.050e-2068.5240S ribosomal protein S29 n=1 Tax=Monoraphidium ne... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001209Ribosomal protein S14PFAMPF00253Ribosomal_S14coord: 8..56
e-value: 1.3E-13
score: 50.5
IPR043140Ribosomal protein S14/S29GENE3D4.10.830.1030s Ribosomal Protein S14; Chain Ncoord: 1..56
e-value: 1.1E-23
score: 84.8
NoneNo IPR availablePANTHERPTHR12010:SF240S RIBOSOMAL PROTEIN S29coord: 3..55
IPR03974440S ribosomal protein S29/30S ribosomal protein S14 type ZPANTHERPTHR1201040S RIBOSOMAL PROTEIN S29coord: 3..55
IPR018271Ribosomal protein S14, conserved sitePROSITEPS00527RIBOSOMAL_S14coord: 22..44
IPR023676Ribosomal protein S14, type Z, archaealHAMAPMF_01364_ARibosomal_S14_2_Acoord: 3..57
score: 16.22702

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1486contigP-wetherbeei_contig1486:1066..1266 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1486.1.1mRNA_P-wetherbeei_contig1486.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1486 568..1678 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1486.1.1 ID=prot_P-wetherbeei_contig1486.1.1|Name=mRNA_P-wetherbeei_contig1486.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=67bp
MPAKALQNSHPKVHSKGGRHCRTCGNQCGIIRKYGINMCRQCFRHYANDI
GFHKVSERGIGKEAAI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001209Ribosomal_S14
IPR043140Ribosomal_S14/S29
IPR03974440S_S29/30S_S14z
IPR018271Ribosomal_S14_CS
IPR023676Ribosomal_S14_type-Z_arc