mRNA_P-wetherbeei_contig14837.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14837.1.1
Unique NamemRNA_P-wetherbeei_contig14837.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14837.1.1 vs. uniprot
Match: A0A7S3XQ15_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQ15_HETAK)

HSP 1 Score: 109 bits (272), Expect = 2.330e-26
Identity = 54/80 (67.50%), Postives = 63/80 (78.75%), Query Frame = 1
Query:    7 VTRADFETVCAPLFARALAPVDRLLEQLALAPSDVDEVVCVGGTTRIPRVRELLRERLGVERLNTHIDPDVTVAWGAATV 246
            VTR +FE  C+ LF RA+ PVD +LE++ L    VDEVV VGGTTRIPRVR  L+E LGVE LNTHIDPD+TVA+GAATV
Sbjct:  356 VTRDEFEHACSDLFERAMIPVDLVLEEVGLTARGVDEVVMVGGTTRIPRVRARLKEHLGVESLNTHIDPDITVAYGAATV 435          
BLAST of mRNA_P-wetherbeei_contig14837.1.1 vs. uniprot
Match: W7TIN6_9STRA (Cytosol-type hsp70 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIN6_9STRA)

HSP 1 Score: 104 bits (260), Expect = 2.970e-26
Identity = 52/82 (63.41%), Postives = 61/82 (74.39%), Query Frame = 1
Query:    1 VEVTRADFETVCAPLFARALAPVDRLLEQLALAPSDVDEVVCVGGTTRIPRVRELLRERLGVERLNTHIDPDVTVAWGAATV 246
            V V+R  FE  C  +FARAL+PVDR LE   +   ++DEVV VGGTTRIP++RE+LR  L VE LNTHIDPDVTVA GAA V
Sbjct:  124 VSVSRDGFEKACKDVFARALSPVDRCLESNGMGRDEIDEVVMVGGTTRIPKIREMLRAHLNVESLNTHIDPDVTVAVGAACV 205          
BLAST of mRNA_P-wetherbeei_contig14837.1.1 vs. uniprot
Match: D7FN45_ECTSI (Similarities to Heat shock protein 70-probable alternative splicing n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN45_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 1.890e-25
Identity = 52/84 (61.90%), Postives = 62/84 (73.81%), Query Frame = 1
Query:    1 VEVTRADFETVCAPLFARALAPVDRLLEQLALAPSDVDEVVCVGGTTRIPRVRELLRERLGVERLNTHIDPDVTVAWGAATVAH 252
            +E+TR ++E  CA LF R +APVDRLL  L L   ++DEVV VGG TR PRVR LL   LGV+RLN  IDPDV VA+GAAT+AH
Sbjct:  369 LELTRTEYEQSCASLFDRGVAPVDRLLHHLDLTVDEIDEVVMVGGMTRTPRVRSLLESHLGVDRLNVDIDPDVVVAYGAATIAH 452          
BLAST of mRNA_P-wetherbeei_contig14837.1.1 vs. uniprot
Match: A0A4D9CVJ2_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CVJ2_9STRA)

HSP 1 Score: 104 bits (259), Expect = 2.150e-24
Identity = 51/82 (62.20%), Postives = 61/82 (74.39%), Query Frame = 1
Query:    1 VEVTRADFETVCAPLFARALAPVDRLLEQLALAPSDVDEVVCVGGTTRIPRVRELLRERLGVERLNTHIDPDVTVAWGAATV 246
            + V+R  FE  C  +FARAL+PVDR LE   +   ++DEVV VGGTTRIP++RE+LR  L VE LNTHIDPDVTVA GAA V
Sbjct:  393 ISVSRDGFEKACKDVFARALSPVDRCLESNGMGRDEIDEVVMVGGTTRIPKIREMLRAHLNVESLNTHIDPDVTVAVGAACV 474          
BLAST of mRNA_P-wetherbeei_contig14837.1.1 vs. uniprot
Match: A0A6U1BP74_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1BP74_9STRA)

HSP 1 Score: 103 bits (257), Expect = 3.240e-24
Identity = 48/82 (58.54%), Postives = 63/82 (76.83%), Query Frame = 1
Query:    1 VEVTRADFETVCAPLFARALAPVDRLLEQLALAPSDVDEVVCVGGTTRIPRVRELLRERLGVERLNTHIDPDVTVAWGAATV 246
            +EVTR+ FE  C PLF R L PVD LL +  +   ++DEVV VGGT+RIPR+RELL+E++GV+ LN  IDPD+TVA GAA++
Sbjct:  358 IEVTRSAFEEACDPLFQRVLRPVDLLLGESGMPAEEIDEVVLVGGTSRIPRIRELLKEKIGVDHLNMEIDPDITVAVGAASI 439          
BLAST of mRNA_P-wetherbeei_contig14837.1.1 vs. uniprot
Match: A0A835Z661_9STRA (Heat shock protein 70 family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z661_9STRA)

HSP 1 Score: 102 bits (255), Expect = 5.890e-24
Identity = 52/84 (61.90%), Postives = 62/84 (73.81%), Query Frame = 1
Query:    1 VEVTRADFETVCAPLFARALAPVDRLLEQLALAPSDVDEVVCVGGTTRIPRVRELLRERLGVERLNTHIDPDVTVAWGAATVAH 252
            V VTR +FE   APLF RALA VDRL+E+      ++ E V VGGT+R+PRVR  L+ RL +  LNTHIDPDVTVA+GAATVAH
Sbjct:  351 VAVTREEFEAAAAPLFERALAAVDRLMEKSGHDAGEIQEAVMVGGTSRMPRVRADLQRRLRLSHLNTHIDPDVTVAYGAATVAH 434          
BLAST of mRNA_P-wetherbeei_contig14837.1.1 vs. uniprot
Match: A0A448Z0F8_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z0F8_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 6.600e-22
Identity = 44/82 (53.66%), Postives = 62/82 (75.61%), Query Frame = 1
Query:    1 VEVTRADFETVCAPLFARALAPVDRLLEQLALAPSDVDEVVCVGGTTRIPRVRELLRERLGVERLNTHIDPDVTVAWGAATV 246
            +EVT  ++ T C PLF R++ P  RL+E L L   ++DE+V VGGTTR+P++REL+R+     +LNTHIDPD+TVA+GAA+V
Sbjct:  506 LEVTLEEYNTACQPLFDRSVVPATRLVEDLTLQKEEIDEIVMVGGTTRMPQIRELVRQAFPGAQLNTHIDPDLTVAYGAASV 587          
BLAST of mRNA_P-wetherbeei_contig14837.1.1 vs. uniprot
Match: A0A7S2XQP6_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XQP6_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 1.940e-21
Identity = 44/82 (53.66%), Postives = 64/82 (78.05%), Query Frame = 1
Query:    1 VEVTRADFETVCAPLFARALAPVDRLLEQLALAPSDVDEVVCVGGTTRIPRVRELLRERLGVERLNTHIDPDVTVAWGAATV 246
            +++T A+F+     L+ R++ PV RLL+ L L   ++DEVV VGGTTR+P++RE++R+ LGV  LNTHIDPD+TVA+GAA+V
Sbjct:  270 LQLTTAEFDVAVNALYERSILPVRRLLQDLNLQRDEIDEVVMVGGTTRMPQIREIVRKELGVLSLNTHIDPDLTVAYGAASV 351          
BLAST of mRNA_P-wetherbeei_contig14837.1.1 vs. uniprot
Match: A0A7S2EKQ5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EKQ5_TRICV)

HSP 1 Score: 90.5 bits (223), Expect = 5.410e-21
Identity = 42/80 (52.50%), Postives = 60/80 (75.00%), Query Frame = 1
Query:    7 VTRADFETVCAPLFARALAPVDRLLEQLALAPSDVDEVVCVGGTTRIPRVRELLRERLGVERLNTHIDPDVTVAWGAATV 246
            +T  +++   + L+AR++ P+ RLL  L L   ++DEVV VGGTTR+PR+RE++R  L VE LNT IDPD+TVA+GAA+V
Sbjct:   97 LTSDEYDAAVSDLYARSMIPIRRLLSDLNLEKDEIDEVVMVGGTTRMPRIREMVRAELEVEELNTSIDPDLTVAYGAASV 176          
BLAST of mRNA_P-wetherbeei_contig14837.1.1 vs. uniprot
Match: A0A1E7EWL9_9STRA (HSP70-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EWL9_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 7.470e-21
Identity = 43/82 (52.44%), Postives = 61/82 (74.39%), Query Frame = 1
Query:    1 VEVTRADFETVCAPLFARALAPVDRLLEQLALAPSDVDEVVCVGGTTRIPRVRELLRERLGVERLNTHIDPDVTVAWGAATV 246
            +E+T  ++ T   PLF R++ P  RLL+ L L+  +VDE+V VGGTTR+P++REL+R      +LNTHIDPD+TVA+GAA+V
Sbjct:  443 LEITLEEYNTAVVPLFNRSVIPATRLLDDLTLSRDEVDEIVMVGGTTRMPQIRELVRRAFPKAQLNTHIDPDITVAYGAASV 524          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14837.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3XQ15_HETAK2.330e-2667.50Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
W7TIN6_9STRA2.970e-2663.41Cytosol-type hsp70 n=1 Tax=Nannochloropsis gaditan... [more]
D7FN45_ECTSI1.890e-2561.90Similarities to Heat shock protein 70-probable alt... [more]
A0A4D9CVJ2_9STRA2.150e-2462.20Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A6U1BP74_9STRA3.240e-2458.54Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835Z661_9STRA5.890e-2461.90Heat shock protein 70 family n=1 Tax=Tribonema min... [more]
A0A448Z0F8_9STRA6.600e-2253.66Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S2XQP6_9STRA1.940e-2153.66Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2EKQ5_TRICV5.410e-2152.50Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A1E7EWL9_9STRA7.470e-2152.44HSP70-domain-containing protein n=1 Tax=Fragilario... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14837contigP-wetherbeei_contig14837:197..451 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2850.Phatr11940
PFAMsHSP70
Model size255
Max annot lvl2759|Eukaryota
KEGG koko:K03283,ko:K09490
KEGG TC1.A.33,1.A.33.1
KEGG Pathwayko03040,ko03060,ko04010,ko04141,ko04144,ko04213,ko04612,ko04915,ko04918,ko05020,ko05134,ko05145,ko05162,ko05164,ko05169,map03040,map03060,map04010,map04141,map04144,map04213,map04612,map04915,map04918,map05020,map05134,map05145,map05162,map05164,map05169
KEGG ModuleM00353,M00355
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.54e-20
EggNOG OGsCOG0443@1|root,KOG0100@2759|Eukaryota
Ec32 ortholog descriptionHeat shock protein 70 family
Ec32 orthologEc-06_008350.1
DescriptionATP binding
Cds size255
COG categoryO
BRITEko00000,ko00001,ko00002,ko01009,ko03009,ko03029,ko03041,ko03051,ko03110,ko04131,ko04147,ko04516
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186035.0459964-CDS-P-wetherbeei_contig14837:196..4511683186035.0459964-CDS-P-wetherbeei_contig14837:196..451Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14837 197..451 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14837.1.1prot_P-wetherbeei_contig14837.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14837 197..451 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14837.1.1

>prot_P-wetherbeei_contig14837.1.1 ID=prot_P-wetherbeei_contig14837.1.1|Name=mRNA_P-wetherbeei_contig14837.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=85bp
VEVTRADFETVCAPLFARALAPVDRLLEQLALAPSDVDEVVCVGGTTRIP
RVRELLRERLGVERLNTHIDPDVTVAWGAATVAH*
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mRNA from alignment at P-wetherbeei_contig14837:197..451+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14837.1.1 ID=mRNA_P-wetherbeei_contig14837.1.1|Name=mRNA_P-wetherbeei_contig14837.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=255bp|location=Sequence derived from alignment at P-wetherbeei_contig14837:197..451+ (Phaeothamnion wetherbeei SAG_119_79)
GTGGAGGTGACGCGAGCCGACTTCGAAACTGTCTGTGCGCCGCTCTTTGC GCGGGCACTGGCGCCGGTGGATCGGCTACTGGAGCAGCTGGCGTTGGCGC CGTCGGACGTGGACGAGGTGGTCTGCGTTGGCGGCACGACGCGCATCCCG CGGGTCCGAGAGCTGCTGCGGGAGCGGCTGGGTGTGGAGCGGCTCAACAC GCACATCGACCCGGACGTGACGGTGGCGTGGGGCGCCGCCACGGTCGCAC ACTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14837:197..451+

>mRNA_P-wetherbeei_contig14837.1.1 ID=mRNA_P-wetherbeei_contig14837.1.1|Name=mRNA_P-wetherbeei_contig14837.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=255bp|location=Sequence derived from alignment at P-wetherbeei_contig14837:197..451+ (Phaeothamnion wetherbeei SAG_119_79)
GTGGAGGTGACGCGAGCCGACTTCGAAACTGTCTGTGCGCCGCTCTTTGC
GCGGGCACTGGCGCCGGTGGATCGGCTACTGGAGCAGCTGGCGTTGGCGC
CGTCGGACGTGGACGAGGTGGTCTGCGTTGGCGGCACGACGCGCATCCCG
CGGGTCCGAGAGCTGCTGCGGGAGCGGCTGGGTGTGGAGCGGCTCAACAC
GCACATCGACCCGGACGTGACGGTGGCGTGGGGCGCCGCCACGGTCGCAC
ACTGA
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