prot_P-wetherbeei_contig14829.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig14829.1.1
Unique Nameprot_P-wetherbeei_contig14829.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length224
Homology
BLAST of mRNA_P-wetherbeei_contig14829.1.1 vs. uniprot
Match: A0A7C2YWE1_9PROT (GntR family transcriptional regulator n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C2YWE1_9PROT)

HSP 1 Score: 346 bits (887), Expect = 1.110e-118
Identity = 178/221 (80.54%), Postives = 198/221 (89.59%), Query Frame = 0
Query:    2 IPLLTDRAYERIKHDIMTCAIAPGTEVSEPQLCTHYRLGKAPVRMALIRLAHDGLLRAIPRRGYMVTAITLKDIHDVFELRLMLEPQAAHMAAGKVDVQRLRVLDESCRPGYQSNDIKSITRFLEANKAFHVAIAQATGNGRLAVMVAQLLDQMTRLLHLGLGLRNRSQEMQHEHRALVKALARGDSETAERISREQIEAARSMVLSAIMTSNTVMNIAIT 222
            IPLLTDRAYERIKHDI+ CAIAPGTEVSE QLC HY+LGKAPVRMAL RLAH+GL+RAIPRRGYMVTA+TLKDI D+FELRLMLEP AA MAAG+V  QRLR LDE+CR GYQS D KSI+RF++A KAFHVAIAQATGN RLA  V +LLD+MTRLLHLGLGLRNRSQEMQHE RALVKAL RGD  TAER+SREQIEA R+MVLSAI+TS++V+N+AIT
Sbjct:    5 IPLLTDRAYERIKHDIICCAIAPGTEVSEAQLCAHYKLGKAPVRMALTRLAHEGLVRAIPRRGYMVTAVTLKDIQDMFELRLMLEPAAARMAAGRVQAQRLRALDEACRAGYQSGDAKSISRFIDATKAFHVAIAQATGNLRLACAVEELLDEMTRLLHLGLGLRNRSQEMQHEQRALVKALLRGDGATAERLSREQIEATRNMVLSAILTSSSVVNLAIT 225          
BLAST of mRNA_P-wetherbeei_contig14829.1.1 vs. uniprot
Match: A0A1F4DE76_9PROT (HTH gntR-type domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4DE76_9PROT)

HSP 1 Score: 340 bits (873), Expect = 2.060e-116
Identity = 175/223 (78.48%), Postives = 193/223 (86.55%), Query Frame = 0
Query:    2 IPLLTDRAYERIKHDIMTCAIAPGTEVSEPQLCTHYRLGKAPVRMALIRLAHDGLLRAIPRRGYMVTAITLKDIHDVFELRLMLEPQAAHMAAGKVDVQRLRVLDESCRPGYQSNDIKSITRFLEANKAFHVAIAQATGNGRLAVMVAQLLDQMTRLLHLGLGLRNRSQEMQHEHRALVKALARGDSETAERISREQIEAARSMVLSAIMTSNTVMNIAITGE 224
            IPLLTDRAYERIKHDI+ CAIAPG E+SE QLC  Y+LGKAPVRMAL RLAHDGL+RAIPRRGYMV  +TLKDI DVFELRLMLEP AA MAAG+VD QRLR LDE CR GYQS D+KSI+RFL+ANKAFHVAIAQA GN RLA  + +LLD+MTRLLHLGLGLRNRSQEMQHEHR L+KAL RGD  TAERI R+QIEAAR+MVLSAI+TS + MN+AI  E
Sbjct:   18 IPLLTDRAYERIKHDIICCAIAPGAEISEAQLCLQYKLGKAPVRMALSRLAHDGLVRAIPRRGYMVMPVTLKDIQDVFELRLMLEPAAARMAAGRVDAQRLRTLDEVCRAGYQSGDVKSISRFLDANKAFHVAIAQAAGNSRLADAIEKLLDEMTRLLHLGLGLRNRSQEMQHEHRTLMKALVRGDGGTAERICRDQIEAARNMVLSAILTSRSAMNLAIAME 240          
BLAST of mRNA_P-wetherbeei_contig14829.1.1 vs. uniprot
Match: A0A1F3ZXB1_9PROT (HTH gntR-type domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_64_14 TaxID=1797482 RepID=A0A1F3ZXB1_9PROT)

HSP 1 Score: 327 bits (837), Expect = 3.950e-111
Identity = 165/221 (74.66%), Postives = 192/221 (86.88%), Query Frame = 0
Query:    2 IPLLTDRAYERIKHDIMTCAIAPGTEVSEPQLCTHYRLGKAPVRMALIRLAHDGLLRAIPRRGYMVTAITLKDIHDVFELRLMLEPQAAHMAAGKVDVQRLRVLDESCRPGYQSNDIKSITRFLEANKAFHVAIAQATGNGRLAVMVAQLLDQMTRLLHLGLGLRNRSQEMQHEHRALVKALARGDSETAERISREQIEAARSMVLSAIMTSNTVMNIAIT 222
            IPLLTDRAYERI+HDI+ C IAPG E++E QLC HY+LGKAPVRMAL RLAH+GL+RAIPRRG+MV+ +TLKDI D+FELR MLEPQAA MAAGKV+ QRL+ LDE+C  GYQ  D KSI RFLEA KAF VA+A+ATGN RLA  +AQLLD MTRLLHLGLGLRNRSQE+Q EHRALVKAL RGD +TA+RI REQIEAAR+MVLSA++TS ++MN+A+T
Sbjct:    5 IPLLTDRAYERIRHDIICCVIAPGAEITEAQLCLHYKLGKAPVRMALHRLAHEGLVRAIPRRGHMVSPVTLKDIQDIFELRQMLEPQAARMAAGKVNAQRLKALDEACGGGYQPGDAKSIDRFLEAYKAFRVAVAEATGNARLAHAIAQLLDGMTRLLHLGLGLRNRSQELQQEHRALVKALVRGDGDTAQRICREQIEAARNMVLSAVLTSKSIMNVALT 225          
BLAST of mRNA_P-wetherbeei_contig14829.1.1 vs. uniprot
Match: UPI00198723DA (GntR family transcriptional regulator n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI00198723DA)

HSP 1 Score: 278 bits (711), Expect = 1.220e-91
Identity = 141/221 (63.80%), Postives = 174/221 (78.73%), Query Frame = 0
Query:    1 AIPLLTDRAYERIKHDIMTCAIAPGTEVSEPQLCTHYRLGKAPVRMALIRLAHDGLLRAIPRRGYMVTAITLKDIHDVFELRLMLEPQAAHMAAGKVDVQRLRVLDESCRPGYQSNDIKSITRFLEANKAFHVAIAQATGNGRLAVMVAQLLDQMTRLLHLGLGLRNRSQEMQHEHRALVKALARGDSETAERISREQIEAARSMVLSAIMTSNTVMNIAI 221
            A PLL D+AYERIK D++ C + PG+ +SE QL   YRLGKAP+RMAL RLAH+GL+RA+PRRGY+V+ +TL+DI D+FELRL+LEPQAA  AAGKVD  RL++LD+ CR GY+  D+    RFLEAN +FHV IAQATGN RLA ++  LLD+MTRLLH+GL  R+RS EMQHEH ALVKAL RGD +TA  I REQIEAAR+MVL A + S  ++ +AI
Sbjct:   25 AEPLLNDQAYERIKRDVIACVLPPGSSISESQLGGQYRLGKAPIRMALQRLAHEGLVRALPRRGYVVSPVTLQDIQDIFELRLLLEPQAARQAAGKVDASRLKLLDDVCRAGYRPGDVVGTQRFLEANASFHVTIAQATGNQRLAHLIEALLDEMTRLLHMGLTSRDRSSEMQHEHGALVKALRRGDGDTAALICREQIEAARTMVLHAALNSRAMLTMAI 245          
BLAST of mRNA_P-wetherbeei_contig14829.1.1 vs. uniprot
Match: UPI00191A5745 (GntR family transcriptional regulator n=2 Tax=Ramlibacter monticola TaxID=1926872 RepID=UPI00191A5745)

HSP 1 Score: 224 bits (570), Expect = 2.180e-70
Identity = 112/222 (50.45%), Postives = 157/222 (70.72%), Query Frame = 0
Query:    2 IPLLTDRAYERIKHDIMTCAIAPGTEVSEPQLCTHYRLGKAPVRMALIRLAHDGLLRAIPRRGYMVTAITLKDIHDVFELRLMLEPQAAHMAAGKVDVQRLRVLDESCRPGYQSNDIKSITRFLEANKAFHVAIAQATGNGRLAVMVAQLLDQMTRLLHLGLGLRNRSQEMQHEHRALVKALARGDSETAERISREQIEAARSMVLSAIMTSNTVMNIAITG 223
            +P LTD+ Y  I+ DI++  +APG  +SE  L T Y  GK PVR+AL RL  +GL+ A PRR + V+ ITL+D+HD++ LRL+LEP AA +AAG++DV+ L+ +D  CR GY   D  S  RFLEAN+ FH+ IAQA+GN R   ++ Q+ D+ TR++H GL  RNRS EMQHEH AL+ AL RGD++ A RI+ EQ+ A+R MVL+A++ S  +++  +TG
Sbjct:   13 LPPLTDQVYGAIRRDILSGVLAPGAAISEASLVTRYGFGKTPVRLALSRLRQEGLVSASPRRSFAVSPITLRDVHDLYGLRLVLEPAAARLAAGRIDVRALKKVDAVCRRGYVPGDAASTLRFLEANRDFHLGIAQASGNLRFVKLLGQVFDETTRVMHFGLASRNRSVEMQHEHEALLAALERGDADAASRIAEEQVAASRDMVLAALLQSADLLDRPLTG 234          
BLAST of mRNA_P-wetherbeei_contig14829.1.1 vs. uniprot
Match: A0A4V2NJZ9_9PROT (GntR family transcriptional regulator n=3 Tax=Acetobacteraceae TaxID=433 RepID=A0A4V2NJZ9_9PROT)

HSP 1 Score: 221 bits (562), Expect = 2.270e-69
Identity = 118/210 (56.19%), Postives = 150/210 (71.43%), Query Frame = 0
Query:    1 AIPLLTDRAYERIKHDIMTCAIAPGTEVSEPQLCTHYRLGKAPVRMALIRLAHDGLLRAIPRRGYMVTAITLKDIHDVFELRLMLEPQAAHMAAGKVDVQRLRVLDESCRPGYQSNDIKSITRFLEANKAFHVAIAQATGNGRLAVMVAQLLDQMTRLLHLGLGLRNRSQEMQHEHRALVKALARGDSETAERISREQIEAARSMVLSAI 210
            A P LT+RA   ++ DI+T  +APG  VSE  +  H  LGKAPVR AL RLA +GL+ A+PRRG+MV+ +T++DIH+VF+LRLMLEP+AA  AAG+VD Q L  LD  C  GY   D  S  RFL+ANKAFHVAIA+  GN RLA  + +LLD+ TR+L LGL  R+R+ EM HEH  LV+ALA G +E A RI  EQ+ A+R MVL+A+
Sbjct:    9 APPSLTERAVAELRRDILTARLAPGETVSEGAVAQHLELGKAPVRAALARLAEEGLVIAVPRRGWMVSLVTIRDIHEVFDLRLMLEPEAARRAAGRVDAQILARLDAVCAEGYDCADEDSAMRFLDANKAFHVAIAELAGNARLARQLDRLLDESTRMLVLGLRPRDRTGEMAHEHHVLVEALALGRAEEAARIMHEQVSASRKMVLAAL 218          
BLAST of mRNA_P-wetherbeei_contig14829.1.1 vs. uniprot
Match: UPI001BCACD4D (GntR family transcriptional regulator n=1 Tax=Roseococcus sp. SDR TaxID=2835532 RepID=UPI001BCACD4D)

HSP 1 Score: 219 bits (559), Expect = 6.470e-69
Identity = 115/208 (55.29%), Postives = 151/208 (72.60%), Query Frame = 0
Query:    3 PLLTDRAYERIKHDIMTCAIAPGTEVSEPQLCTHYRLGKAPVRMALIRLAHDGLLRAIPRRGYMVTAITLKDIHDVFELRLMLEPQAAHMAAGKVDVQRLRVLDESCRPGYQSNDIKSITRFLEANKAFHVAIAQATGNGRLAVMVAQLLDQMTRLLHLGLGLRNRSQEMQHEHRALVKALARGDSETAERISREQIEAARSMVLSAI 210
            P LT+RA   ++ +I+T  +APG  VSE  +  H  LGKAPVR AL RLA +GL++A+PRRG+MV+ +T++DIH+VF+LRLMLEP+AA  AAG+VD   LR LD  C  GY   D +S   FL+ANK FHVAIA+ +GN RLA  + +LLD+ TR+L LGL  R+R+ EM HEH ALV+ALA G +E A RI  EQ+ A+R MVL+A+
Sbjct:   11 PSLTERAVSALRREILTTRLAPGETVSEAAVAAHLELGKAPVRAALARLAEEGLVQAVPRRGWMVSLVTIRDIHEVFDLRLMLEPEAARRAAGRVDAVMLRRLDAICAEGYDCADAESAMCFLDANKQFHVAIAELSGNARLARQLDRLLDESTRMLVLGLRPRDRTGEMAHEHHALVEALALGRAEEAARIMHEQVSASRQMVLAAL 218          
BLAST of mRNA_P-wetherbeei_contig14829.1.1 vs. uniprot
Match: UPI00195FB9B5 (GntR family transcriptional regulator n=1 Tax=Rhodoligotrophos defluvii TaxID=2561934 RepID=UPI00195FB9B5)

HSP 1 Score: 220 bits (560), Expect = 7.370e-69
Identity = 108/217 (49.77%), Postives = 152/217 (70.05%), Query Frame = 0
Query:    5 LTDRAYERIKHDIMTCAIAPGTEVSEPQLCTHYRLGKAPVRMALIRLAHDGLLRAIPRRGYMVTAITLKDIHDVFELRLMLEPQAAHMAAGKVDVQRLRVLDESCRPGYQSNDIKSITRFLEANKAFHVAIAQATGNGRLAVMVAQLLDQMTRLLHLGLGLRNRSQEMQHEHRALVKALARGDSETAERISREQIEAARSMVLSAIMTSNTVMNIAI 221
            L + AY+RIK  I+ C   PG  ++E QL     LGKAP+R AL RL  DG ++++PR+GY+V  ITL+D+H +FE+RL+LEP AA  AAGK+D +R++ L+  C+ GY   D  S + FLEANK FH+A+    GN +L  +++ +L++M+RL HLGL LRNR+ EM+HEHR L+ AL  GD ETAE+++  QIEAAR MVL AI+ S+   ++ I
Sbjct:   22 LGEIAYDRIKEKIIRCEFEPGAAITEAQLALQIGLGKAPIRRALSRLVQDGFVKSLPRKGYVVAPITLRDVHQLFEIRLLLEPAAARKAAGKIDPKRIQELERICQAGYVPGDRASESAFLEANKDFHIAVVDGAGNQKLTRILSHILEEMSRLFHLGLALRNRTDEMKHEHRELIDALVAGDGETAEKVTIAQIEAARRMVLDAILASSNFQSVEI 238          
BLAST of mRNA_P-wetherbeei_contig14829.1.1 vs. uniprot
Match: UPI001EDFF63F (GntR family transcriptional regulator n=1 Tax=unclassified Xanthobacter TaxID=2623496 RepID=UPI001EDFF63F)

HSP 1 Score: 217 bits (552), Expect = 9.300e-68
Identity = 104/215 (48.37%), Postives = 154/215 (71.63%), Query Frame = 0
Query:    5 LTDRAYERIKHDIMTCAIAPGTEVSEPQLCTHYRLGKAPVRMALIRLAHDGLLRAIPRRGYMVTAITLKDIHDVFELRLMLEPQAAHMAAGKVDVQRLRVLDESCRPGYQSNDIKSITRFLEANKAFHVAIAQATGNGRLAVMVAQLLDQMTRLLHLGLGLRNRSQEMQHEHRALVKALARGDSETAERISREQIEAARSMVLSAIMTSNTVMNI 219
            +T RAY  I+ DIM C +APG+EVS   L  H+  G  PVR+AL RL  DGL++A+PR+GY+V  +TLK + D+FE+R +LEP  A  AAGK+D  +L  L+  C   Y   + +S   +LEAN+AFHV IA++ GN +L   ++Q+LD+MTR+L +GLGLRNR+ EMQHEH+ALV+AL   D+E AER++ +++ +++ MVL AI++S+ + ++
Sbjct:    7 ITGRAYAAIRQDIMRCTLAPGSEVSAAHLAEHFGFGLGPVRIALSRLEQDGLVKALPRKGYLVIPVTLKSVLDIFEMRALLEPYVARKAAGKIDPAKLAFLNSVCNRDYNHRNAQSRLEYLEANRAFHVFIAESAGNQKLTGTLSQILDEMTRILFMGLGLRNRTTEMQHEHKALVEALVANDAEEAERLAAQEVISSKQMVLDAILSSSAIQDV 221          
BLAST of mRNA_P-wetherbeei_contig14829.1.1 vs. uniprot
Match: A0A1V2H0P0_9PROT (GntR family transcriptional regulator n=2 Tax=Roseomonas TaxID=125216 RepID=A0A1V2H0P0_9PROT)

HSP 1 Score: 216 bits (551), Expect = 1.050e-67
Identity = 113/215 (52.56%), Postives = 155/215 (72.09%), Query Frame = 0
Query:    3 PLLTDRAYERIKHDIMTCAIAPGTEVSEPQLCTHYRLGKAPVRMALIRLAHDGLLRAIPRRGYMVTAITLKDIHDVFELRLMLEPQAAHMAAGKVDVQRLRVLDESCRPGYQSNDIKSITRFLEANKAFHVAIAQATGNGRLAVMVAQLLDQMTRLLHLGLGLRNRSQEMQHEHRALVKALARGDSETAERISREQIEAARSMVLSAIMTSNTVM 217
            P LT++A   ++ +I+T  + PG  +SE        LGKAPVR AL RLA +GL++A+PRRG++V+ +T++DIH+VF+LRLMLEP+AA  AAG+VD   LR LD  C  GY+  D +S   FL+ANKAFHVA+A+ +GNGRLA  V +LLD+ TR+L LGL  R+R+ EM HEH AL++ALA G +E A  I R+Q+ A+RSMVL+A+ T  + M
Sbjct:   11 PSLTEQAVATLRREILTTRLLPGETLSEASAAQLLGLGKAPVRAALARLAEEGLVQAVPRRGWIVSLVTIRDIHEVFDLRLMLEPEAARRAAGRVDTAELRRLDSVCACGYRPEDEESTHAFLDANKAFHVAVAELSGNGRLARQVDRLLDESTRMLALGLRRRDRTGEMAHEHHALIEALALGRAEDAGSIMRQQVSASRSMVLAALTTPESAM 225          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14829.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C2YWE1_9PROT1.110e-11880.54GntR family transcriptional regulator n=1 Tax=Beta... [more]
A0A1F4DE76_9PROT2.060e-11678.48HTH gntR-type domain-containing protein n=1 Tax=Be... [more]
A0A1F3ZXB1_9PROT3.950e-11174.66HTH gntR-type domain-containing protein n=1 Tax=Be... [more]
UPI00198723DA1.220e-9163.80GntR family transcriptional regulator n=1 Tax=Prot... [more]
UPI00191A57452.180e-7050.45GntR family transcriptional regulator n=2 Tax=Raml... [more]
A0A4V2NJZ9_9PROT2.270e-6956.19GntR family transcriptional regulator n=3 Tax=Acet... [more]
UPI001BCACD4D6.470e-6955.29GntR family transcriptional regulator n=1 Tax=Rose... [more]
UPI00195FB9B57.370e-6949.77GntR family transcriptional regulator n=1 Tax=Rhod... [more]
UPI001EDFF63F9.300e-6848.37GntR family transcriptional regulator n=1 Tax=uncl... [more]
A0A1V2H0P0_9PROT1.050e-6752.56GntR family transcriptional regulator n=2 Tax=Rose... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011711GntR, C-terminalSMARTSM00895FCD_2coord: 77..201
e-value: 1.2E-19
score: 81.2
IPR011711GntR, C-terminalPFAMPF07729FCDcoord: 77..200
e-value: 2.3E-23
score: 83.0
IPR000524Transcription regulator HTH, GntRSMARTSM00345gntr3coord: 9..67
e-value: 2.7E-10
score: 50.2
IPR000524Transcription regulator HTH, GntRPFAMPF00392GntRcoord: 6..67
e-value: 2.7E-12
score: 46.2
IPR000524Transcription regulator HTH, GntRPROSITEPS50949HTH_GNTRcoord: 3..70
score: 14.435016
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 4..68
e-value: 5.5E-17
score: 63.1
IPR008920Transcription regulator FadR/GntR, C-terminalGENE3D1.20.120.530coord: 71..214
e-value: 1.5E-30
score: 108.2
IPR008920Transcription regulator FadR/GntR, C-terminalSUPERFAMILY48008GntR ligand-binding domain-likecoord: 73..209
NoneNo IPR availablePANTHERPTHR43537TRANSCRIPTIONAL REGULATOR, GNTR FAMILYcoord: 5..208
NoneNo IPR availablePANTHERPTHR43537:SF34PYRUVATE DEHYDROGENASE COMPLEX REPRESSORcoord: 5..208
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 5..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14829contigP-wetherbeei_contig14829:8..679 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14829.1.1mRNA_P-wetherbeei_contig14829.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig14829 8..679 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig14829.1.1 ID=prot_P-wetherbeei_contig14829.1.1|Name=mRNA_P-wetherbeei_contig14829.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=224bp
AIPLLTDRAYERIKHDIMTCAIAPGTEVSEPQLCTHYRLGKAPVRMALIR
LAHDGLLRAIPRRGYMVTAITLKDIHDVFELRLMLEPQAAHMAAGKVDVQ
RLRVLDESCRPGYQSNDIKSITRFLEANKAFHVAIAQATGNGRLAVMVAQ
LLDQMTRLLHLGLGLRNRSQEMQHEHRALVKALARGDSETAERISREQIE
AARSMVLSAIMTSNTVMNIAITGE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011711GntR_C
IPR000524Tscrpt_reg_HTH_GntR
IPR036388WH-like_DNA-bd_sf
IPR008920TF_FadR/GntR_C
IPR036390WH_DNA-bd_sf