mRNA_P-wetherbeei_contig14825.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14825.1.1
Unique NamemRNA_P-wetherbeei_contig14825.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14825.1.1 vs. uniprot
Match: A0A1Z9UFL0_9GAMM (Ribonucleoside-diphosphate reductase n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Z9UFL0_9GAMM)

HSP 1 Score: 962 bits (2487), Expect = 0.000e+0
Identity = 452/556 (81.29%), Postives = 507/556 (91.19%), Query Frame = 1
Query:    1 PQLSSCYLTTVPDDLEGIFSAIRDDALLSKYAGGLGNDWTPVRGMGAHIKGTNGKSQGVVPFLKVANDTAVAVNQGGKRKGAMCAYLETWHMDIEEFLELRKNTGDDRRRTHDMNTANWVPDLFMKRVVEDGQWTLFSPDEVPDLHDTIGPEFERKYALYEEMAERGQIRNVKRLRAVDLWRKMLAMLYETGHPWITFKDACNLRSPQQHVGVVHSSNLCTEITLNTKANQEIAVCNLGSVNLAQHVTDGQLDEAKIAHTVGIAMRMLDNVIDYNYYSVPTARAANLRHRPVGLGIMGFQDCLYQLRIPYATEEAIKFADRSMEVVSYYAIKASTDLAAERGVYNSYDGSLWSKGILPIDSISLLEEGRGGYIEMNHETTMAWEPLRERVRSVGMRNSNCMAIAPTATISNICGVSQSVEPAYQNLFVKANLSGDFTVVNMFLVDDLKRRKLWDEVMVNDLKYYDGSVAQIDRIPNELKELYATAFEVDPRWLVEAGSRRQKWLDQAQSLNLYMSEPSGAKLDNLYKLAWVRGLKTTYYLRTMGATHVEKSTLADG 1668
            PQLSSCYLT+VPDDL+GIF AI+DDALLSK+AGGLGNDWTPVRGMGAHIKGTNGKSQGVVPFLKVANDTAVAVNQGGKRKGAMCAYLE+WH+D+EEF ELRKNTGDDRRRTHDMNTANW+PDLFMKRV ED  WTLFSPDE P+LHD+ G +F+  Y+ YEE A++G+I+N KRL+AVDLWRKMLAM+YETGHPW TFKDACNLRSPQQH GVVHSSNLCTEITLNT   +EIAVCNLGSVNLAQHV++  L+  K+  T+ IAMRMLDNVIDYNYYSVPTARA+N+RHRPVGLGIMGFQD LY  +IPY+++ AI FAD SME VSYYAI+AST+LA ERG Y S++GSLWSKGILPIDSI LL +GRGGY+EM+    + W+ LRER ++VGMRNSNCMAIAPTATISNICGVSQS+EP YQNLFVK+NLSGDFTVVNM+LVDDLKR  LWDEVMVNDLKYYDGS+++IDR+P+ELKELYATAFE+D RWL+EAGSRRQKWLDQAQSLNLYMSEPSG K+DN+YKLAWVRGLKTTYYLRT+GATHVEKSTLADG
Sbjct:  376 PQLSSCYLTSVPDDLDGIFGAIKDDALLSKFAGGLGNDWTPVRGMGAHIKGTNGKSQGVVPFLKVANDTAVAVNQGGKRKGAMCAYLESWHVDVEEFTELRKNTGDDRRRTHDMNTANWIPDLFMKRVCEDKDWTLFSPDETPELHDSFGKDFDDVYSAYEEKADKGEIKNFKRLKAVDLWRKMLAMVYETGHPWFTFKDACNLRSPQQHTGVVHSSNLCTEITLNTSPEKEIAVCNLGSVNLAQHVSENGLNTEKLKSTIDIAMRMLDNVIDYNYYSVPTARASNMRHRPVGLGIMGFQDALYAQKIPYSSDNAISFADESMEAVSYYAIEASTNLAEERGTYQSFEGSLWSKGILPIDSIELLAKGRGGYLEMDRGQRLDWDSLRERTKAVGMRNSNCMAIAPTATISNICGVSQSIEPTYQNLFVKSNLSGDFTVVNMYLVDDLKRANLWDEVMVNDLKYYDGSISKIDRVPSELKELYATAFEIDCRWLIEAGSRRQKWLDQAQSLNLYMSEPSGPKMDNIYKLAWVRGLKTTYYLRTIGATHVEKSTLADG 931          
BLAST of mRNA_P-wetherbeei_contig14825.1.1 vs. uniprot
Match: A0A523NQW5_9PROT (Ribonucleoside-diphosphate reductase n=2 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523NQW5_9PROT)

HSP 1 Score: 944 bits (2440), Expect = 0.000e+0
Identity = 443/556 (79.68%), Postives = 503/556 (90.47%), Query Frame = 1
Query:    1 PQLSSCYLTTVPDDLEGIFSAIRDDALLSKYAGGLGNDWTPVRGMGAHIKGTNGKSQGVVPFLKVANDTAVAVNQGGKRKGAMCAYLETWHMDIEEFLELRKNTGDDRRRTHDMNTANWVPDLFMKRVVEDGQWTLFSPDEVPDLHDTIGPEFERKYALYEEMAERGQIRNVKRLRAVDLWRKMLAMLYETGHPWITFKDACNLRSPQQHVGVVHSSNLCTEITLNTKANQEIAVCNLGSVNLAQHVTDGQLDEAKIAHTVGIAMRMLDNVIDYNYYSVPTARAANLRHRPVGLGIMGFQDCLYQLRIPYATEEAIKFADRSMEVVSYYAIKASTDLAAERGVYNSYDGSLWSKGILPIDSISLLEEGRGGYIEMNHETTMAWEPLRERVRSVGMRNSNCMAIAPTATISNICGVSQSVEPAYQNLFVKANLSGDFTVVNMFLVDDLKRRKLWDEVMVNDLKYYDGSVAQIDRIPNELKELYATAFEVDPRWLVEAGSRRQKWLDQAQSLNLYMSEPSGAKLDNLYKLAWVRGLKTTYYLRTMGATHVEKSTLADG 1668
            PQLSSCYLT++PDDL+GIF A++D+ALLSKYAGGLGNDWTPVR MGAHIKGTNGKSQGVVPFLKVANDTAVAVNQGGKRKGAMCAYLE+WH D EEF +LRKNTGDDRRRTHDMNTANWVPDLFMKR+ EDGQWTLFSPDE PDLHD +G +FER+Y  YEE A RG+I+NVK +RAV+ WRKML ML+ETGHPW+TFKD CNLRSPQQHVGVVHSSNLCTEITLNT    EIAVCNLGSVNLAQHV    +D AK+  T+ IA+RMLDNVIDYNYYSV TARA+NLRHRP+GLGIMGFQD LY+L I YA+ EA++FADRSME VSY+AI+AST+LAAERG Y+S++GSLWS+GILP+DS+SLLE+GRGGY++++  TT+ W  LR++V S+GMRNSNCMAIAPTATISNICGVSQS+EP YQNLFVK+NLSGDFTVVNM LV  LK   +WDEVMVNDLKYYDGSVA IDR+P+++K +YATAFE+DPRWLVEA SRRQKW+DQAQSLNLYM+EP GAKLDNLYKLAWV+GLKTTYYLRT+GATHVEKSTLA+G
Sbjct:  375 PQLSSCYLTSIPDDLDGIFGAMKDNALLSKYAGGLGNDWTPVRAMGAHIKGTNGKSQGVVPFLKVANDTAVAVNQGGKRKGAMCAYLESWHKDSEEFFDLRKNTGDDRRRTHDMNTANWVPDLFMKRICEDGQWTLFSPDETPDLHDLVGQDFERRYVEYEEKAARGEIKNVKTVRAVEHWRKMLGMLFETGHPWVTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTSPGHEIAVCNLGSVNLAQHVNGDGVDMAKLERTITIALRMLDNVIDYNYYSVSTARASNLRHRPIGLGIMGFQDSLYKLDIRYASNEAVEFADRSMEAVSYFAIQASTELAAERGTYSSFEGSLWSQGILPLDSLSLLEQGRGGYLDVDRTTTLDWSSLRDKVVSIGMRNSNCMAIAPTATISNICGVSQSIEPTYQNLFVKSNLSGDFTVVNMALVAKLKNLGMWDEVMVNDLKYYDGSVANIDRVPDDIKHVYATAFEIDPRWLVEAASRRQKWIDQAQSLNLYMAEPDGAKLDNLYKLAWVKGLKTTYYLRTLGATHVEKSTLAEG 930          
BLAST of mRNA_P-wetherbeei_contig14825.1.1 vs. uniprot
Match: A0A3M1DK41_9GAMM (Ribonucleoside-diphosphate reductase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M1DK41_9GAMM)

HSP 1 Score: 932 bits (2409), Expect = 0.000e+0
Identity = 441/552 (79.89%), Postives = 501/552 (90.76%), Query Frame = 1
Query:    1 PQLSSCYLTTVPDDLEGIFSAIRDDALLSKYAGGLGNDWTPVRGMGAHIKGTNGKSQGVVPFLKVANDTAVAVNQGGKRKGAMCAYLETWHMDIEEFLELRKNTGDDRRRTHDMNTANWVPDLFMKRVVEDGQWTLFSPDEVPDLHDTIGPEFERKYALYEEMAERGQIRNVKRLRAVDLWRKMLAMLYETGHPWITFKDACNLRSPQQHVGVVHSSNLCTEITLNTKANQEIAVCNLGSVNLAQHVTDGQLDEAKIAHTVGIAMRMLDNVIDYNYYSVPTARAANLRHRPVGLGIMGFQDCLYQLRIPYATEEAIKFADRSMEVVSYYAIKASTDLAAERGVYNSYDGSLWSKGILPIDSISLLEEGRGGYIEMNHETTMAWEPLRERVRSVGMRNSNCMAIAPTATISNICGVSQSVEPAYQNLFVKANLSGDFTVVNMFLVDDLKRRKLWDEVMVNDLKYYDGSVAQIDRIPNELKELYATAFEVDPRWLVEAGSRRQKWLDQAQSLNLYMSEPSGAKLDNLYKLAWVRGLKTTYYLRTMGATHVEKST 1656
            PQLSSCYLTTVPDDL+GIF AI+D+ALLSK+AGGLGNDWTPVRG+GAHIKGTNGKSQGVVPFLKVANDTAVAVNQGGKRKGA+CAYLETWH+DIEEFLELRKNTGD+RRRTHDMNTANW+PDLFMKRV E+ +WTLFSPDEVPDLHD  G  FE+ Y  YEE A RG+IRN ++++AV+LWRKML ML+ETGHPWITFKD CN+RSPQ+H GVVHSSNLCTEITLNT+A +EIAVCNLGSVNLA+HVT+  LD  K+  T+  AMRMLDNVI+YNYY+VP AR ANLRHRPVGLGIMGFQD L+ LRIPYA+E A++FADRSME+VSY+AI+ASTDLA ERG Y+S++GSLWS+GILPIDS+ LL E RGG+++++  +T+ WE LRERV++VGMRNSNCMAIAPTATISNICGV+QS+EP YQNLFVK+NLSG+FTVVN  LV DLK  KLWDEVMVNDLKYYDGSVA IDRIP ELK LYATAFE+DPRWLVEA +RRQKWLDQAQSLNLYM+EPSG KLDNLYKLAWVRGLKTTYYLR +GATH+EK+T
Sbjct:  373 PQLSSCYLTTVPDDLDGIFKAIKDNALLSKFAGGLGNDWTPVRGLGAHIKGTNGKSQGVVPFLKVANDTAVAVNQGGKRKGAVCAYLETWHIDIEEFLELRKNTGDERRRTHDMNTANWIPDLFMKRVAEEDEWTLFSPDEVPDLHDLYGRAFEQAYLDYEEKAARGEIRNFRKVKAVELWRKMLGMLFETGHPWITFKDPCNVRSPQRHRGVVHSSNLCTEITLNTRAGEEIAVCNLGSVNLARHVTEQGLDAEKLERTIRTAMRMLDNVIEYNYYTVPEARRANLRHRPVGLGIMGFQDALHTLRIPYASEAAVEFADRSMELVSYHAIRASTDLAEERGRYDSFEGSLWSQGILPIDSLELLAEERGGFLDVDRSSTLDWEALRERVKTVGMRNSNCMAIAPTATISNICGVAQSIEPTYQNLFVKSNLSGEFTVVNPHLVADLKAHKLWDEVMVNDLKYYDGSVAHIDRIPEELKALYATAFEIDPRWLVEAAARRQKWLDQAQSLNLYMAEPSGRKLDNLYKLAWVRGLKTTYYLRALGATHMEKTT 924          
BLAST of mRNA_P-wetherbeei_contig14825.1.1 vs. uniprot
Match: A0A4V1AVI4_9GAMM (Ribonucleoside-diphosphate reductase n=1 Tax=Nitrosococcus wardiae TaxID=1814290 RepID=A0A4V1AVI4_9GAMM)

HSP 1 Score: 930 bits (2404), Expect = 0.000e+0
Identity = 441/553 (79.75%), Postives = 498/553 (90.05%), Query Frame = 1
Query:    1 PQLSSCYLTTVPDDLEGIFSAIRDDALLSKYAGGLGNDWTPVRGMGAHIKGTNGKSQGVVPFLKVANDTAVAVNQGGKRKGAMCAYLETWHMDIEEFLELRKNTGDDRRRTHDMNTANWVPDLFMKRVVEDGQWTLFSPDEVPDLHDTIGPEFERKYALYEEMAERGQIRNVKRLRAVDLWRKMLAMLYETGHPWITFKDACNLRSPQQHVGVVHSSNLCTEITLNTKANQEIAVCNLGSVNLAQHVTDGQLDEAKIAHTVGIAMRMLDNVIDYNYYSVPTARAANLRHRPVGLGIMGFQDCLYQLRIPYATEEAIKFADRSMEVVSYYAIKASTDLAAERGVYNSYDGSLWSKGILPIDSISLLEEGRGGYIEMNHETTMAWEPLRERVRSVGMRNSNCMAIAPTATISNICGVSQSVEPAYQNLFVKANLSGDFTVVNMFLVDDLKRRKLWDEVMVNDLKYYDGSVAQIDRIPNELKELYATAFEVDPRWLVEAGSRRQKWLDQAQSLNLYMSEPSGAKLDNLYKLAWVRGLKTTYYLRTMGATHVEKSTL 1659
            PQLSSCYLTTV DDL+GI+SAI+D+ALLSKYAGGLGNDW+ VRGMGAHIKGTNGKSQGVVPFLKVANDTAVAVNQGGKRKGA+CAYLETWH+DIEEFLELRKNTGDDRRRTHDMNTANWVPDLFMKRV EDG+WTLFSPDE PDLHD +G  FE  Y  YEE A  G+I+N K+ RAVDLWRKML+ML+ETGHPWITFKD CNLRSPQQH GVVHSSNLCTEITLNT +++EIAVCNLGS+NL QH+ +  L+  K+  T+  AMRMLDNVIDYNYYSVPTAR +NLRHRPVGLG+MGFQD LY+LR+PYA E A++FADRSME +SYYAIKAS++LAAERG Y +++GSLWSKGILPIDSI LLE+GRGGY++ +   T+ W+ LRE+V++VGMRNSNCMAIAPTATISNICGVSQS+EP YQNLFVK+NLSG+FTV+N +LV DLK R LWDEVMVNDLKY+DGS   IDRIP +LK LYATAFE+DPRWLVEA SRRQKWLDQAQSLNLYM+EP+G KLDNLYKLAWVRGLKTTYYLR++GATHVEKST+
Sbjct:  370 PQLSSCYLTTVSDDLDGIYSAIKDNALLSKYAGGLGNDWSRVRGMGAHIKGTNGKSQGVVPFLKVANDTAVAVNQGGKRKGAVCAYLETWHIDIEEFLELRKNTGDDRRRTHDMNTANWVPDLFMKRVAEDGEWTLFSPDETPDLHDLVGQAFEAAYLRYEEKAACGEIKNFKKQRAVDLWRKMLSMLFETGHPWITFKDPCNLRSPQQHAGVVHSSNLCTEITLNT-SDEEIAVCNLGSINLPQHLDENGLNLPKLEKTITTAMRMLDNVIDYNYYSVPTARRSNLRHRPVGLGLMGFQDALYKLRLPYAAEAAVEFADRSMEAISYYAIKASSNLAAERGKYCTFEGSLWSKGILPIDSIGLLEQGRGGYLQQDRTQTLDWDSLREQVKTVGMRNSNCMAIAPTATISNICGVSQSIEPTYQNLFVKSNLSGEFTVINPYLVQDLKARDLWDEVMVNDLKYFDGSAQPIDRIPEDLKTLYATAFEIDPRWLVEAASRRQKWLDQAQSLNLYMAEPNGKKLDNLYKLAWVRGLKTTYYLRSLGATHVEKSTM 921          
BLAST of mRNA_P-wetherbeei_contig14825.1.1 vs. uniprot
Match: A0A1A6C2Y1_9GAMM (Vitamin B12-dependent ribonucleotide reductase n=2 Tax=Acidihalobacter TaxID=1765964 RepID=A0A1A6C2Y1_9GAMM)

HSP 1 Score: 930 bits (2403), Expect = 0.000e+0
Identity = 439/551 (79.67%), Postives = 504/551 (91.47%), Query Frame = 1
Query:    1 PQLSSCYLTTVPDDLEGIFSAIRDDALLSKYAGGLGNDWTPVRGMGAHIKGTNGKSQGVVPFLKVANDTAVAVNQGGKRKGAMCAYLETWHMDIEEFLELRKNTGDDRRRTHDMNTANWVPDLFMKRVVEDGQWTLFSPDEVPDLHDTIGPEFERKYALYEEMAERGQIRNVKRLRAVDLWRKMLAMLYETGHPWITFKDACNLRSPQQHVGVVHSSNLCTEITLNTKANQEIAVCNLGSVNLAQHVTDGQLDEAKIAHTVGIAMRMLDNVIDYNYYSVPTARAANLRHRPVGLGIMGFQDCLYQLRIPYATEEAIKFADRSMEVVSYYAIKASTDLAAERGVYNSYDGSLWSKGILPIDSISLLEEGRGGYIEMNHETTMAWEPLRERVRSVGMRNSNCMAIAPTATISNICGVSQSVEPAYQNLFVKANLSGDFTVVNMFLVDDLKRRKLWDEVMVNDLKYYDGSVAQIDRIPNELKELYATAFEVDPRWLVEAGSRRQKWLDQAQSLNLYMSEPSGAKLDNLYKLAWVRGLKTTYYLRTMGATHVEKS 1653
            PQLSSCYLTTVPDDL+GIF+A++D+ALLSK+AGGLGNDWT VRG+GAHIKGTNGKSQGVVPFLKVANDTAVAVNQGGKRKGA+CAYLETWH+DIEEFLELRKNTGD+RRRTHDMNTANW+PDLFMKRV E+G+WTLFSP+EVPDLHD +G  FE +Y  YE  A RG+I+  ++++AVDLWRKML+ML+ETGHPWI FKD CNLRSPQQHVGVVHSSNLCTEITLNT ++ EIAVCNLGSVNLAQHVT+  LD AK+A T+  AMRMLDNVIDYNYYSVP AR ANLRHRPVGLG+MGFQD LY+LR+PYA+E A++FADRSME VSYYAI+AST+LAAERG Y ++DGSLWS+G+LPIDS++LLEE RG YI+++  +T+ W+ LRERV++ GMRNSN MAIAPTATISNICGVSQS+EP YQNL+VK+NLSG+FTVVN +LV DLK+R LWDEVMVNDLKYYDGSVA IDR+P +LK LYATAFEVDPRWLVEA SRRQKW+DQAQSLNLYM+EPSG KLDNLYKLAWVRGLKTTYYLR++GATH+EK+
Sbjct:  335 PQLSSCYLTTVPDDLDGIFAAVKDNALLSKFAGGLGNDWTRVRGLGAHIKGTNGKSQGVVPFLKVANDTAVAVNQGGKRKGAVCAYLETWHVDIEEFLELRKNTGDERRRTHDMNTANWIPDLFMKRVAEEGEWTLFSPNEVPDLHDLVGTAFEARYTEYEAKAARGEIKVFRKVKAVDLWRKMLSMLFETGHPWIAFKDPCNLRSPQQHVGVVHSSNLCTEITLNT-SDDEIAVCNLGSVNLAQHVTEQGLDTAKLARTIKTAMRMLDNVIDYNYYSVPQARRANLRHRPVGLGLMGFQDALYKLRLPYASEAAVEFADRSMEAVSYYAIEASTELAAERGAYKTFDGSLWSRGVLPIDSLNLLEETRGQYIQVDKSSTLDWDGLRERVKAQGMRNSNTMAIAPTATISNICGVSQSIEPIYQNLYVKSNLSGEFTVVNRYLVADLKQRDLWDEVMVNDLKYYDGSVANIDRVPGDLKALYATAFEVDPRWLVEAASRRQKWIDQAQSLNLYMAEPSGKKLDNLYKLAWVRGLKTTYYLRSLGATHMEKA 884          
BLAST of mRNA_P-wetherbeei_contig14825.1.1 vs. uniprot
Match: A0A5M8FJG0_9GAMM (Ribonucleoside-diphosphate reductase n=1 Tax=Thiohalocapsa marina TaxID=424902 RepID=A0A5M8FJG0_9GAMM)

HSP 1 Score: 929 bits (2401), Expect = 0.000e+0
Identity = 448/555 (80.72%), Postives = 496/555 (89.37%), Query Frame = 1
Query:    1 PQLSSCYLTTVPDDLEGIFSAIRDDALLSKYAGGLGNDWTPVRGMGAHIKGTNGKSQGVVPFLKVANDTAVAVNQGGKRKGAMCAYLETWHMDIEEFLELRKNTGDDRRRTHDMNTANWVPDLFMKRVVEDGQWTLFSPDEVPDLHDTIGPEFERKYALYEEMAERGQIRNVKRLRAVDLWRKMLAMLYETGHPWITFKDACNLRSPQQHVGVVHSSNLCTEITLNTKANQEIAVCNLGSVNLAQHVTDGQLDEAKIAHTVGIAMRMLDNVIDYNYYSVPTARAANLRHRPVGLGIMGFQDCLYQLRIPYATEEAIKFADRSMEVVSYYAIKASTDLAAERGVYNSYDGSLWSKGILPIDSISLLEEGRGGYIEMNHETTMAWEPLRERVRSVGMRNSNCMAIAPTATISNICGVSQSVEPAYQNLFVKANLSGDFTVVNMFLVDDLKRRKLWDEVMVNDLKYYDGSVAQIDRIPNELKELYATAFEVDPRWLVEAGSRRQKWLDQAQSLNLYMSEPSGAKLDNLYKLAWVRGLKTTYYLRTMGATHVEKSTLAD 1665
            PQLSSCYLTTVPDDL+GI+ AI+D+ALLSK+AGGLGNDWT VRGMGAHIKGTNGKSQGVVPFLKVANDTAVAVNQGGKRKGA+CAYLETWH+DIEEFL+LRKNTGDDRRRTHDMNTANWVPDLFMKRV ED  WTLFSPDE PDLHD  G  FE+ Y  YEE AERG +R  KRL+AVDLWRKMLAML+ETGHPWI FKD CNLR   QHVG VHSSNLCTEITL+T  +QEIAVCNLGSVNLA HV +  LD AK+  TVG AMRMLDNVIDYN+Y+VP AR +NLRHRPVGLG+MGFQD LY+LRIPYA+ +A++FAD+SME++SYYAI ASTDLA ERG Y S+DGSLWS+GILPIDSI  L EGRGGY+EM+  T++ WE LR+RV SVGMRNSNCMAIAPTATISNI GVSQS+EP YQNLFVK+NLSG+FTVVN +LV DLK + LWD VMVNDLKYYDGSV QI+R+P++LK+LYATAFE+DPRWLVEAGSRRQKWLDQAQSLNLYMSEPSG KLDNLYKLAWVRGLKTTYYLR+MGATHVEKST+ D
Sbjct:  393 PQLSSCYLTTVPDDLDGIYGAIKDNALLSKFAGGLGNDWTRVRGMGAHIKGTNGKSQGVVPFLKVANDTAVAVNQGGKRKGAVCAYLETWHIDIEEFLDLRKNTGDDRRRTHDMNTANWVPDLFMKRVAEDQHWTLFSPDETPDLHDLTGSAFEQAYLAYEERAERGDLRVSKRLKAVDLWRKMLAMLFETGHPWIAFKDPCNLRYTNQHVGTVHSSNLCTEITLHTN-DQEIAVCNLGSVNLANHVGEQGLDTAKLQRTVGTAMRMLDNVIDYNFYNVPQARKSNLRHRPVGLGLMGFQDALYKLRIPYASPQAVQFADQSMELLSYYAIGASTDLAEERGRYQSFDGSLWSQGILPIDSIQRLAEGRGGYLEMDTATSLDWERLRKRVTSVGMRNSNCMAIAPTATISNIAGVSQSIEPTYQNLFVKSNLSGEFTVVNPYLVQDLKAQGLWDSVMVNDLKYYDGSVQQIERVPDDLKQLYATAFEIDPRWLVEAGSRRQKWLDQAQSLNLYMSEPSGKKLDNLYKLAWVRGLKTTYYLRSMGATHVEKSTMDD 946          
BLAST of mRNA_P-wetherbeei_contig14825.1.1 vs. uniprot
Match: B8GMA3_THISH (Ribonucleoside-diphosphate reductase n=3 Tax=Thioalkalivibrio TaxID=106633 RepID=B8GMA3_THISH)

HSP 1 Score: 928 bits (2398), Expect = 0.000e+0
Identity = 444/555 (80.00%), Postives = 499/555 (89.91%), Query Frame = 1
Query:    1 PQLSSCYLTTVPDDLEGIFSAIRDDALLSKYAGGLGNDWTPVRGMGAHIKGTNGKSQGVVPFLKVANDTAVAVNQGGKRKGAMCAYLETWHMDIEEFLELRKNTGDDRRRTHDMNTANWVPDLFMKRVVEDGQWTLFSPDEVPDLHDTIGPEFERKYALYEEMAERGQIRNVKRLRAVDLWRKMLAMLYETGHPWITFKDACNLRSPQQHVGVVHSSNLCTEITLNTKANQEIAVCNLGSVNLAQHVTDGQLDEAKIAHTVGIAMRMLDNVIDYNYYSVPTARAANLRHRPVGLGIMGFQDCLYQLRIPYATEEAIKFADRSMEVVSYYAIKASTDLAAERGVYNSYDGSLWSKGILPIDSISLLEEGRGGYIEMNHETTMAWEPLRERVRSVGMRNSNCMAIAPTATISNICGVSQSVEPAYQNLFVKANLSGDFTVVNMFLVDDLKRRKLWDEVMVNDLKYYDGSVAQIDRIPNELKELYATAFEVDPRWLVEAGSRRQKWLDQAQSLNLYMSEPSGAKLDNLYKLAWVRGLKTTYYLRTMGATHVEKSTLAD 1665
            PQLSSCYLTTVPDDL+GIF AI+D+ALLSK+AGGLGNDWT VRGMGAHIKGTNGKSQGVVPFLKVANDTAVAVNQGGKRKGA+CAYLETWH+D+EEF+ELRKNTGDDRRRTHDMN+ANW+PDLFMKRV E+G+WTLFSP+E PDLHD +G  FE++YA YE  A RG+I+  K+L+AVDLWRKMLAML+ETGHPW+TFKD CNLRSPQQHVGVVHSSNLCTEITLNT ++ EIAVCNLGSVNLA HV +  L+  K+  TV  AMRMLDNVIDYNYYSVP AR +NLRHRPVGLGIMGFQD LYQ RIPYA+E+A++FADRSME VSYYAIKASTDLA ERG Y S+DGSLWS+G+LPIDSI LL + RG Y++ +   T  W+ LR+RV++VGMRNSN MAIAPTATISNICGVSQS+EP YQNLFVK+NLSG+FTV+N  LV+DLK RKLWDEVMVNDLKYYDGSV  IDR+P +LK+LYATAFE+D RWLVEA SRRQKWLDQAQSLNLYM+EPSG KLDNLYKLAWVRGLKTTYYLR+MGATHVEKST+AD
Sbjct:  381 PQLSSCYLTTVPDDLDGIFGAIKDNALLSKFAGGLGNDWTRVRGMGAHIKGTNGKSQGVVPFLKVANDTAVAVNQGGKRKGAVCAYLETWHVDVEEFIELRKNTGDDRRRTHDMNSANWIPDLFMKRVAEEGEWTLFSPNETPDLHDLVGEAFEQRYAEYEAKAARGEIKVFKKLKAVDLWRKMLAMLFETGHPWMTFKDPCNLRSPQQHVGVVHSSNLCTEITLNT-SDDEIAVCNLGSVNLAAHVDENGLNLEKLERTVSTAMRMLDNVIDYNYYSVPQARRSNLRHRPVGLGIMGFQDALYQQRIPYASEDAVEFADRSMEAVSYYAIKASTDLAEERGRYQSFDGSLWSQGVLPIDSIELLAKSRGQYLQQDTSMTFDWDSLRDRVKTVGMRNSNTMAIAPTATISNICGVSQSIEPTYQNLFVKSNLSGEFTVINPNLVNDLKARKLWDEVMVNDLKYYDGSVQPIDRVPADLKQLYATAFELDARWLVEAASRRQKWLDQAQSLNLYMAEPSGKKLDNLYKLAWVRGLKTTYYLRSMGATHVEKSTVAD 934          
BLAST of mRNA_P-wetherbeei_contig14825.1.1 vs. uniprot
Match: A0A1Z8WT88_9GAMM (Ribonucleoside-diphosphate reductase n=1 Tax=Methylococcaceae bacterium TMED69 TaxID=1986766 RepID=A0A1Z8WT88_9GAMM)

HSP 1 Score: 927 bits (2397), Expect = 0.000e+0
Identity = 443/556 (79.68%), Postives = 491/556 (88.31%), Query Frame = 1
Query:    1 PQLSSCYLTTVPDDLEGIFSAIRDDALLSKYAGGLGNDWTPVRGMGAHIKGTNGKSQGVVPFLKVANDTAVAVNQGGKRKGAMCAYLETWHMDIEEFLELRKNTGDDRRRTHDMNTANWVPDLFMKRVVEDGQWTLFSPDEVPDLHDTIGPEFERKYALYEEMAERGQIRNVKRLRAVDLWRKMLAMLYETGHPWITFKDACNLRSPQQHVGVVHSSNLCTEITLNTKANQEIAVCNLGSVNLAQHVTDGQLDEAKIAHTVGIAMRMLDNVIDYNYYSVPTARAANLRHRPVGLGIMGFQDCLYQLRIPYATEEAIKFADRSMEVVSYYAIKASTDLAAERGVYNSYDGSLWSKGILPIDSISLLEEGRGGYIEMNHETTMAWEPLRERVRSVGMRNSNCMAIAPTATISNICGVSQSVEPAYQNLFVKANLSGDFTVVNMFLVDDLKRRKLWDEVMVNDLKYYDGSVAQIDRIPNELKELYATAFEVDPRWLVEAGSRRQKWLDQAQSLNLYMSEPSGAKLDNLYKLAWVRGLKTTYYLRTMGATHVEKSTLADG 1668
            PQLSSCYLTT+PDDL+GIF+AI+DDALLSKYAGGLGNDWTPVR MGA IKGTNGKSQGVVPFLKVANDTAVAVNQGGKRKGAMCAYLETWH+DIEEFLELRKNTGDDRRRTHDMNTANW+PDLFM RV E+ +WTLFSPDEVPDLH+  G EFE  Y  YEE  + G+I+N K++ A++LWRKML MLYETGHPWITFKDA NLRSPQQH GV+HSSNLCTEITLNT+A +EIAVCNLGSVNLA H+ +  LD  K+  TV  AMRMLDNVIDYNYYSV TARA+NL+HRPVGLGIMGFQD L+ L IPYA+EEAI+FAD S E +SYYAI AS+DLA ERG Y S+ GSLWSKGILPIDSI LLE+GRG ++E++  T + WE LR +VR+ GMRNSNC+AIAPTATISNICGVSQS+EP YQNLFVK+NLSGDFT++NM LVD LK R LWDEVMVNDLKYY+GSV+ IDRIP +LKELY TAFE+DPRWLVE  SRRQKWLDQ QSLNLYM+EP G KLDNLYKLAWVRGLKTTYYLRTMGATHVEKSTLADG
Sbjct:  369 PQLSSCYLTTIPDDLDGIFNAIKDDALLSKYAGGLGNDWTPVRAMGAQIKGTNGKSQGVVPFLKVANDTAVAVNQGGKRKGAMCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMTRVSENEEWTLFSPDEVPDLHELYGEEFEITYLQYEEKVKLGEIQNFKKINALELWRKMLGMLYETGHPWITFKDAANLRSPQQHTGVIHSSNLCTEITLNTQAEREIAVCNLGSVNLANHLIETGLDSEKLKKTVNTAMRMLDNVIDYNYYSVNTARASNLKHRPVGLGIMGFQDALHFLNIPYASEEAIEFADSSAEEISYYAISASSDLATERGAYQSFKGSLWSKGILPIDSIELLEKGRGKFVEVDTSTKLDWETLRTKVRTSGMRNSNCLAIAPTATISNICGVSQSIEPTYQNLFVKSNLSGDFTIINMRLVDALKERGLWDEVMVNDLKYYNGSVSSIDRIPQDLKELYKTAFEIDPRWLVECASRRQKWLDQGQSLNLYMAEPDGTKLDNLYKLAWVRGLKTTYYLRTMGATHVEKSTLADG 924          
BLAST of mRNA_P-wetherbeei_contig14825.1.1 vs. uniprot
Match: A0A1A6C670_9GAMM (Ribonucleoside-diphosphate reductase n=2 Tax=Acidihalobacter TaxID=1765964 RepID=A0A1A6C670_9GAMM)

HSP 1 Score: 927 bits (2396), Expect = 0.000e+0
Identity = 438/551 (79.49%), Postives = 504/551 (91.47%), Query Frame = 1
Query:    1 PQLSSCYLTTVPDDLEGIFSAIRDDALLSKYAGGLGNDWTPVRGMGAHIKGTNGKSQGVVPFLKVANDTAVAVNQGGKRKGAMCAYLETWHMDIEEFLELRKNTGDDRRRTHDMNTANWVPDLFMKRVVEDGQWTLFSPDEVPDLHDTIGPEFERKYALYEEMAERGQIRNVKRLRAVDLWRKMLAMLYETGHPWITFKDACNLRSPQQHVGVVHSSNLCTEITLNTKANQEIAVCNLGSVNLAQHVTDGQLDEAKIAHTVGIAMRMLDNVIDYNYYSVPTARAANLRHRPVGLGIMGFQDCLYQLRIPYATEEAIKFADRSMEVVSYYAIKASTDLAAERGVYNSYDGSLWSKGILPIDSISLLEEGRGGYIEMNHETTMAWEPLRERVRSVGMRNSNCMAIAPTATISNICGVSQSVEPAYQNLFVKANLSGDFTVVNMFLVDDLKRRKLWDEVMVNDLKYYDGSVAQIDRIPNELKELYATAFEVDPRWLVEAGSRRQKWLDQAQSLNLYMSEPSGAKLDNLYKLAWVRGLKTTYYLRTMGATHVEKS 1653
            PQLSSCYLTTVPDDL+GIF+A++D+ALLSK+AGGLGNDWT VRG+GAHIKGTNGKSQGVVPFLKVANDTAVAVNQGGKRKGA+CAYLETWH+DIEEFLELRKNTGD+RRRTHDMNTANW+PDLFMKRV E+G+WTLFSP+EVPDLHD +G  FE +YA YE  A RG+I+  ++++AVDLWRKML+ML+ETGHPWI FKD CNLRSPQQHVGVVHSSNLCTEITLNT ++ EIAVCNLGSVNLAQHVT+  LD AK+A T+  AMRMLDNVIDYNYYSVP AR ANLRHRPVGLG+MGFQD LY+LR+PYA+E A++FADRSME VSYYAI+AST+LAAERG Y ++DGSLWS+G+LPIDS++LLEE RG YI+++  +T+ W+ LRERV++ GMRNSN MAIAPTATISNICGVSQS+EP YQNLFVK+NLSG+FTV+N  LV DLK R+LWDEVMVNDLKYYDGSV+ IDR+P++LK LYATAFE+D RWLVEA SRRQKWLDQAQSLNLYM+EPSG KLDNLYKLAWVRGLKTTYYLR++GATH+EK+
Sbjct:  373 PQLSSCYLTTVPDDLDGIFAAVKDNALLSKFAGGLGNDWTRVRGLGAHIKGTNGKSQGVVPFLKVANDTAVAVNQGGKRKGAVCAYLETWHVDIEEFLELRKNTGDERRRTHDMNTANWIPDLFMKRVAEEGEWTLFSPNEVPDLHDLVGTAFEARYAEYEAKAARGEIKVFRKVKAVDLWRKMLSMLFETGHPWIAFKDPCNLRSPQQHVGVVHSSNLCTEITLNT-SDDEIAVCNLGSVNLAQHVTEQGLDTAKLARTIKTAMRMLDNVIDYNYYSVPQARRANLRHRPVGLGLMGFQDALYKLRLPYASEAAVEFADRSMEAVSYYAIEASTELAAERGAYKTFDGSLWSRGVLPIDSLNLLEETRGQYIQVDKSSTLDWDGLRERVKAQGMRNSNTMAIAPTATISNICGVSQSIEPTYQNLFVKSNLSGEFTVINPHLVADLKSRRLWDEVMVNDLKYYDGSVSAIDRVPDDLKALYATAFEIDARWLVEAASRRQKWLDQAQSLNLYMAEPSGKKLDNLYKLAWVRGLKTTYYLRSLGATHMEKA 922          
BLAST of mRNA_P-wetherbeei_contig14825.1.1 vs. uniprot
Match: A0A6M0JW46_9GAMM (Ribonucleoside-diphosphate reductase n=1 Tax=Thiorhodococcus minor TaxID=57489 RepID=A0A6M0JW46_9GAMM)

HSP 1 Score: 924 bits (2388), Expect = 0.000e+0
Identity = 444/555 (80.00%), Postives = 501/555 (90.27%), Query Frame = 1
Query:    1 PQLSSCYLTTVPDDLEGIFSAIRDDALLSKYAGGLGNDWTPVRGMGAHIKGTNGKSQGVVPFLKVANDTAVAVNQGGKRKGAMCAYLETWHMDIEEFLELRKNTGDDRRRTHDMNTANWVPDLFMKRVVEDGQWTLFSPDEVPDLHDTIGPEFERKYALYEEMAERGQIRNVKRLRAVDLWRKMLAMLYETGHPWITFKDACNLRSPQQHVGVVHSSNLCTEITLNTKANQEIAVCNLGSVNLAQHVTDGQLDEAKIAHTVGIAMRMLDNVIDYNYYSVPTARAANLRHRPVGLGIMGFQDCLYQLRIPYATEEAIKFADRSMEVVSYYAIKASTDLAAERGVYNSYDGSLWSKGILPIDSISLLEEGRGGYIEMNHETTMAWEPLRERVRSVGMRNSNCMAIAPTATISNICGVSQSVEPAYQNLFVKANLSGDFTVVNMFLVDDLKRRKLWDEVMVNDLKYYDGSVAQIDRIPNELKELYATAFEVDPRWLVEAGSRRQKWLDQAQSLNLYMSEPSGAKLDNLYKLAWVRGLKTTYYLRTMGATHVEKSTLAD 1665
            PQLSSCYLTTVPDDLEGI+ AI+D+ALLSK+AGGLGNDWT VRGMGAHIKGTNGKSQGVVPFLKVANDTAVAVNQGGKRKGA+CAYLETWH+DIEEFL+LRKNTGDDRRRTHDMNTANWVPDLFMKRV E+G WTLFSPDE PDLHD +G  FE+ Y  YEE AERG+++  KR++AVDLWRK+LAML+ETGHPWI FKD CNLR   QH+GVVHSSNLCTEITL+T  +QEIAVCNLGSVNLA HVT+  LD  ++  TV  AMRMLDNVIDYN+Y+VP AR++NLRHRPVGLGIMGFQD LY++RIPY++ EA++FAD SME +SYYAI+AS++LAAERG Y S+DGSLWS+GILPIDSI LLEEGRGGY++M+  T++ W  LRERV++VGMRNSNCMAIAPTATISNI GVSQS+EP YQNLFVK+NLSG+FTVVN +LV DLK + LWD VMVNDLKYYDGSV QIDRIP+E+K+LYATAFEVD RWL+EAGSRRQKWLDQAQSLNLYM EPSG KLDNLYKLAWVRGLKTTYYLR+MGATHVEKST+AD
Sbjct:  379 PQLSSCYLTTVPDDLEGIYGAIKDNALLSKFAGGLGNDWTRVRGMGAHIKGTNGKSQGVVPFLKVANDTAVAVNQGGKRKGAVCAYLETWHIDIEEFLDLRKNTGDDRRRTHDMNTANWVPDLFMKRVAEEGHWTLFSPDETPDLHDLMGQPFEQAYLAYEERAERGEMKVSKRVQAVDLWRKILAMLFETGHPWIAFKDPCNLRYTNQHIGVVHSSNLCTEITLHTN-DQEIAVCNLGSVNLAAHVTEKGLDTERLQKTVRTAMRMLDNVIDYNFYNVPQARSSNLRHRPVGLGIMGFQDALYKVRIPYSSLEAVQFADLSMEHLSYYAIQASSELAAERGRYPSFDGSLWSQGILPIDSIKLLEEGRGGYLQMDTSTSLDWNGLRERVKTVGMRNSNCMAIAPTATISNIVGVSQSIEPTYQNLFVKSNLSGEFTVVNPYLVADLKAQGLWDSVMVNDLKYYDGSVQQIDRIPDEIKQLYATAFEVDARWLIEAGSRRQKWLDQAQSLNLYMQEPSGKKLDNLYKLAWVRGLKTTYYLRSMGATHVEKSTMAD 932          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14825.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Z9UFL0_9GAMM0.000e+081.29Ribonucleoside-diphosphate reductase n=3 Tax=Gamma... [more]
A0A523NQW5_9PROT0.000e+079.68Ribonucleoside-diphosphate reductase n=2 Tax=Prote... [more]
A0A3M1DK41_9GAMM0.000e+079.89Ribonucleoside-diphosphate reductase n=1 Tax=Gamma... [more]
A0A4V1AVI4_9GAMM0.000e+079.75Ribonucleoside-diphosphate reductase n=1 Tax=Nitro... [more]
A0A1A6C2Y1_9GAMM0.000e+079.67Vitamin B12-dependent ribonucleotide reductase n=2... [more]
A0A5M8FJG0_9GAMM0.000e+080.72Ribonucleoside-diphosphate reductase n=1 Tax=Thioh... [more]
B8GMA3_THISH0.000e+080.00Ribonucleoside-diphosphate reductase n=3 Tax=Thioa... [more]
A0A1Z8WT88_9GAMM0.000e+079.68Ribonucleoside-diphosphate reductase n=1 Tax=Methy... [more]
A0A1A6C670_9GAMM0.000e+079.49Ribonucleoside-diphosphate reductase n=2 Tax=Acidi... [more]
A0A6M0JW46_9GAMM0.000e+080.00Ribonucleoside-diphosphate reductase n=1 Tax=Thior... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14825contigP-wetherbeei_contig14825:3..1670 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog396588.Tgr7_2615
PFAMsATP-cone,LAGLIDADG_3,Ribonuc_red_lgC,Ribonuc_red_lgN
Model size1668
Max annot lvl135613|Chromatiales
KEGG rclassRC00613
KEGG koko:K00525
KEGG ReactionR02017,R02018,R02019,R02024
KEGG Pathwayko00230,ko00240,ko01100,map00230,map00240,map01100
KEGG ModuleM00053
Hectar predicted targeting categoryother localisation
Exons1
Evalue0.0
EggNOG OGsCOG0209@1|root,COG0209@2|Bacteria,1MUJ8@1224|Proteobacteria,1RMPV@1236|Gammaproteobacteria,1WW6H@135613|Chromatiales
EC1.17.4.1
DescriptionProvides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
Cds size1668
COG categoryF
BRITEko00000,ko00001,ko00002,ko01000,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186034.655909-CDS-P-wetherbeei_contig14825:2..16701683186034.655909-CDS-P-wetherbeei_contig14825:2..1670Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14825 3..1670 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14825.1.1prot_P-wetherbeei_contig14825.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14825 3..1670 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14825.1.1

>prot_P-wetherbeei_contig14825.1.1 ID=prot_P-wetherbeei_contig14825.1.1|Name=mRNA_P-wetherbeei_contig14825.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=556bp
PQLSSCYLTTVPDDLEGIFSAIRDDALLSKYAGGLGNDWTPVRGMGAHIK
GTNGKSQGVVPFLKVANDTAVAVNQGGKRKGAMCAYLETWHMDIEEFLEL
RKNTGDDRRRTHDMNTANWVPDLFMKRVVEDGQWTLFSPDEVPDLHDTIG
PEFERKYALYEEMAERGQIRNVKRLRAVDLWRKMLAMLYETGHPWITFKD
ACNLRSPQQHVGVVHSSNLCTEITLNTKANQEIAVCNLGSVNLAQHVTDG
QLDEAKIAHTVGIAMRMLDNVIDYNYYSVPTARAANLRHRPVGLGIMGFQ
DCLYQLRIPYATEEAIKFADRSMEVVSYYAIKASTDLAAERGVYNSYDGS
LWSKGILPIDSISLLEEGRGGYIEMNHETTMAWEPLRERVRSVGMRNSNC
MAIAPTATISNICGVSQSVEPAYQNLFVKANLSGDFTVVNMFLVDDLKRR
KLWDEVMVNDLKYYDGSVAQIDRIPNELKELYATAFEVDPRWLVEAGSRR
QKWLDQAQSLNLYMSEPSGAKLDNLYKLAWVRGLKTTYYLRTMGATHVEK
STLADG
back to top

mRNA from alignment at P-wetherbeei_contig14825:3..1670-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14825.1.1 ID=mRNA_P-wetherbeei_contig14825.1.1|Name=mRNA_P-wetherbeei_contig14825.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1668bp|location=Sequence derived from alignment at P-wetherbeei_contig14825:3..1670- (Phaeothamnion wetherbeei SAG_119_79)
CCGCAACTATCGTCCTGCTACCTGACCACGGTGCCGGACGATCTGGAAGG CATCTTCAGTGCCATCCGTGACGATGCCCTGCTGTCGAAATATGCCGGCG GCCTCGGTAATGATTGGACACCGGTGCGTGGCATGGGCGCCCATATCAAG GGCACCAATGGCAAGTCGCAGGGCGTGGTGCCCTTCCTCAAGGTCGCCAA CGACACCGCCGTCGCCGTCAACCAGGGTGGCAAGCGCAAGGGTGCGATGT GCGCCTATCTTGAAACCTGGCACATGGACATCGAGGAATTCCTGGAGCTG CGCAAGAACACCGGCGATGACCGCCGCCGCACCCATGACATGAATACCGC CAACTGGGTGCCCGATCTGTTCATGAAGCGCGTGGTCGAAGACGGCCAAT GGACCTTGTTCTCGCCCGACGAAGTGCCGGATCTGCACGACACCATCGGC CCCGAGTTCGAACGCAAGTACGCGCTCTATGAAGAGATGGCCGAACGCGG CCAGATCCGTAACGTCAAGCGTCTGCGCGCGGTCGATCTGTGGCGCAAGA TGCTCGCGATGCTGTACGAGACCGGCCATCCGTGGATCACCTTCAAGGAC GCGTGCAATCTGCGCTCGCCACAGCAGCATGTCGGCGTCGTGCACAGCTC CAACCTGTGCACCGAAATCACGCTGAACACCAAGGCCAACCAGGAAATCG CGGTCTGCAACCTGGGCTCGGTCAACCTCGCCCAGCACGTCACCGACGGC CAACTGGACGAAGCGAAGATCGCGCACACGGTCGGCATCGCGATGCGCAT GCTCGATAACGTCATCGACTACAACTACTACAGCGTACCGACCGCGCGCG CCGCCAACCTGCGTCACCGTCCGGTCGGCCTCGGCATCATGGGCTTCCAG GACTGCCTGTATCAGTTACGCATCCCCTACGCCACCGAAGAGGCGATCAA GTTCGCCGACCGTTCGATGGAAGTGGTGAGCTACTACGCGATCAAGGCCT CGACTGATCTTGCCGCCGAGCGCGGCGTCTACAACAGCTATGACGGCTCG CTGTGGAGCAAGGGCATCCTGCCGATAGACTCGATCAGCCTGCTCGAGGA AGGTCGTGGCGGCTACATCGAGATGAACCACGAGACCACCATGGCGTGGG AGCCGTTGCGCGAACGCGTGCGTAGCGTCGGCATGCGCAATTCCAATTGC ATGGCGATCGCACCGACCGCGACCATCTCGAACATCTGCGGTGTCAGCCA GTCGGTCGAACCGGCTTATCAGAATCTGTTCGTGAAGGCCAACCTGTCGG GTGACTTCACCGTCGTCAACATGTTCCTGGTCGATGACCTCAAGCGGCGC AAGCTGTGGGACGAGGTGATGGTCAATGATCTGAAGTATTACGACGGTAG CGTCGCGCAGATCGATCGCATTCCGAACGAGCTCAAGGAACTGTACGCGA CTGCCTTTGAAGTCGATCCGCGCTGGCTGGTGGAAGCCGGTTCGCGCCGC CAGAAGTGGCTCGACCAAGCACAGTCGCTCAATCTCTACATGTCCGAGCC GAGCGGCGCCAAGCTCGACAACCTCTACAAGCTGGCGTGGGTAAGAGGTC TCAAAACCACTTACTACCTGCGCACCATGGGCGCCACGCATGTCGAGAAG AGCACCCTCGCCGATGGC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig14825:3..1670-

>mRNA_P-wetherbeei_contig14825.1.1 ID=mRNA_P-wetherbeei_contig14825.1.1|Name=mRNA_P-wetherbeei_contig14825.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1668bp|location=Sequence derived from alignment at P-wetherbeei_contig14825:3..1670- (Phaeothamnion wetherbeei SAG_119_79)
CCGCAACTATCGTCCTGCTACCTGACCACGGTGCCGGACGATCTGGAAGG
CATCTTCAGTGCCATCCGTGACGATGCCCTGCTGTCGAAATATGCCGGCG
GCCTCGGTAATGATTGGACACCGGTGCGTGGCATGGGCGCCCATATCAAG
GGCACCAATGGCAAGTCGCAGGGCGTGGTGCCCTTCCTCAAGGTCGCCAA
CGACACCGCCGTCGCCGTCAACCAGGGTGGCAAGCGCAAGGGTGCGATGT
GCGCCTATCTTGAAACCTGGCACATGGACATCGAGGAATTCCTGGAGCTG
CGCAAGAACACCGGCGATGACCGCCGCCGCACCCATGACATGAATACCGC
CAACTGGGTGCCCGATCTGTTCATGAAGCGCGTGGTCGAAGACGGCCAAT
GGACCTTGTTCTCGCCCGACGAAGTGCCGGATCTGCACGACACCATCGGC
CCCGAGTTCGAACGCAAGTACGCGCTCTATGAAGAGATGGCCGAACGCGG
CCAGATCCGTAACGTCAAGCGTCTGCGCGCGGTCGATCTGTGGCGCAAGA
TGCTCGCGATGCTGTACGAGACCGGCCATCCGTGGATCACCTTCAAGGAC
GCGTGCAATCTGCGCTCGCCACAGCAGCATGTCGGCGTCGTGCACAGCTC
CAACCTGTGCACCGAAATCACGCTGAACACCAAGGCCAACCAGGAAATCG
CGGTCTGCAACCTGGGCTCGGTCAACCTCGCCCAGCACGTCACCGACGGC
CAACTGGACGAAGCGAAGATCGCGCACACGGTCGGCATCGCGATGCGCAT
GCTCGATAACGTCATCGACTACAACTACTACAGCGTACCGACCGCGCGCG
CCGCCAACCTGCGTCACCGTCCGGTCGGCCTCGGCATCATGGGCTTCCAG
GACTGCCTGTATCAGTTACGCATCCCCTACGCCACCGAAGAGGCGATCAA
GTTCGCCGACCGTTCGATGGAAGTGGTGAGCTACTACGCGATCAAGGCCT
CGACTGATCTTGCCGCCGAGCGCGGCGTCTACAACAGCTATGACGGCTCG
CTGTGGAGCAAGGGCATCCTGCCGATAGACTCGATCAGCCTGCTCGAGGA
AGGTCGTGGCGGCTACATCGAGATGAACCACGAGACCACCATGGCGTGGG
AGCCGTTGCGCGAACGCGTGCGTAGCGTCGGCATGCGCAATTCCAATTGC
ATGGCGATCGCACCGACCGCGACCATCTCGAACATCTGCGGTGTCAGCCA
GTCGGTCGAACCGGCTTATCAGAATCTGTTCGTGAAGGCCAACCTGTCGG
GTGACTTCACCGTCGTCAACATGTTCCTGGTCGATGACCTCAAGCGGCGC
AAGCTGTGGGACGAGGTGATGGTCAATGATCTGAAGTATTACGACGGTAG
CGTCGCGCAGATCGATCGCATTCCGAACGAGCTCAAGGAACTGTACGCGA
CTGCCTTTGAAGTCGATCCGCGCTGGCTGGTGGAAGCCGGTTCGCGCCGC
CAGAAGTGGCTCGACCAAGCACAGTCGCTCAATCTCTACATGTCCGAGCC
GAGCGGCGCCAAGCTCGACAACCTCTACAAGCTGGCGTGGGTAAGAGGTC
TCAAAACCACTTACTACCTGCGCACCATGGGCGCCACGCATGTCGAGAAG
AGCACCCTCGCCGATGGC
back to top