mRNA_P-wetherbeei_contig14814.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14814.2.1 vs. uniprot
Match: A0A3C0TYL7_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TYL7_9PROT) HSP 1 Score: 171 bits (432), Expect = 1.410e-51 Identity = 81/156 (51.92%), Postives = 106/156 (67.95%), Query Frame = 1
Query: 13 EDPKFIIDLELKFFRPELIEFLAYWNAKRGARPFPSRKDIAPREIEKLLPWINMYDTLDGGKESRVRLIGTALSDALGGGDYSGKPVSELPQLLSKRIQRGINLVLETRAPLRTYAIESAIPGQDFQGNESCLAPLSTNGADIDMIIVVAILQNRK 480
+D F +L F R EL EFL YW +K R FP+R DI PREIE+LLPW+NMYD G+E R+RL+G+ LS GD GKP+S P LL+ R ++GI+ VLETR P+R A S+IPGQ+FQG E C PLS NG DI++++V+A+L+ K
Sbjct: 4 KDGGFTRQPDLNFSRGELTEFLDYWRSKSRERNFPTRADINPREIERLLPWVNMYDVSPEGEEHRIRLLGSVLSSNFNIGDLRGKPLSSFPPLLASRARKGIDWVLETRGPIRAVATSSSIPGQEFQGTEICAVPLSDNGQDINIVMVIALLEKHK 159
BLAST of mRNA_P-wetherbeei_contig14814.2.1 vs. uniprot
Match: A0A353LU28_9PROT (Uncharacterized protein n=4 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A353LU28_9PROT) HSP 1 Score: 163 bits (412), Expect = 1.490e-48 Identity = 82/155 (52.90%), Postives = 105/155 (67.74%), Query Frame = 1
Query: 16 DPKFIIDLELKFFRPELIEFLAYWNAKRGARPFPSRKDIAPREIEKLLPWINMYDTLDGGKESRVRLIGTALSDALGGGDYSGKPVSELPQLLSKRIQRGINLVLETRAPLRTYAIESAIPGQDFQGNESCLAPLSTNGADIDMIIVVAILQNRK 480
D F I +L F RPEL FL YW KR R FP R +I P E KLLPWINMYD LDGG++ RVR+ GTAL++ +G + GK VSE+ +++RI+ + VLE RAP+R SA+PGQDFQG+E C PLS++G DID+IIV ++L RK
Sbjct: 7 DDNFCIITQLDFRRPELNTFLEYWLNKRADRIFPRRSEINPAEFPKLLPWINMYDVLDGGRDFRVRICGTALTEVIGF-EVGGKLVSEIDPPIARRIKLTLQAVLEMRAPIRATTSRSALPGQDFQGSEVCALPLSSDGTDIDIIIVASLLDTRK 160
BLAST of mRNA_P-wetherbeei_contig14814.2.1 vs. uniprot
Match: A0A2N3ENK7_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-12 TaxID=2013658 RepID=A0A2N3ENK7_9PROT) HSP 1 Score: 90.5 bits (223), Expect = 9.050e-20 Identity = 55/145 (37.93%), Postives = 79/145 (54.48%), Query Frame = 1
Query: 31 IDLELKFFRPELIEFLAYWNAKRGARPFPSRKDIAPREIEKLLPWINMYDTLDGGK---ESRVRLIGTALSDALGGGDYSGKPVS-ELPQLLSKRIQRGINLVLETRAPLRTYAIESAIPGQDFQGNESCLAPLSTNGADIDMII 453
ID L F L E LAYW KRG RPFP+R DI P EI LP + + D L RVRL+GTAL++ L D++G+P+ E+P+ + I + + +V + R PLR + + E+ L PL+T GA + M++
Sbjct: 30 IDPLLAFQDGRLREMLAYWEGKRGGRPFPARADINPAEIISHLPSVFLVDALAPASTLAHFRVRLMGTALNE-LFARDFTGRPLEGEVPEKMGAAIVKLLGIVCQLRRPLRVHGVAVFAKAGPSTAIEAALMPLTTGGAGVGMVM 173
BLAST of mRNA_P-wetherbeei_contig14814.2.1 vs. uniprot
Match: A0A8I1URS1_9PROT (PAS domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A8I1URS1_9PROT) HSP 1 Score: 89.4 bits (220), Expect = 2.770e-19 Identity = 49/135 (36.30%), Postives = 74/135 (54.81%), Query Frame = 1
Query: 58 PELIEFLAYWNAKRGARPFPSRKDIAPREIEKLLPWINMYDTLDGGKESRVRLIGTALSDALGGGDYSGKPVSELPQLLSKRIQRGINLVLETRAPLRTYAIESAIPG---QDFQGNESCLAPLSTNGADIDMII 453
P L L YWNAKRGARP P+RKDI P E+++ L W+N+ D L GG++ R RLIGT +++ + +G+ VS+ +Q + + A R S P + F+ ES PLS +G +++I+
Sbjct: 20 PTLAVLLDYWNAKRGARPMPARKDIRPNELKEHLGWVNLVDVLPGGRDFRYRLIGTLVTEYFLA-ESTGQTVSQAFARWGSAVQSTVLQLFSATARNRKVIYASGAPNTLARGFEAYESLFFPLSDDGETVNVIM 153
BLAST of mRNA_P-wetherbeei_contig14814.2.1 vs. uniprot
Match: A0A2N3C5R5_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-3 TaxID=2013666 RepID=A0A2N3C5R5_9PROT) HSP 1 Score: 87.0 bits (214), Expect = 1.390e-18 Identity = 52/145 (35.86%), Postives = 76/145 (52.41%), Query Frame = 1
Query: 31 IDLELKFFRPELIEFLAYWNAKRGARPFPSRKDIAPREIEKLLPWINMYDTLDGG---KESRVRLIGTALSDALGGGDYSGKPVS-ELPQLLSKRIQRGINLVLETRAPLRTYAIESAIPGQDFQGNESCLAPLSTNGADIDMII 453
ID L F L E AYW +KRG RPFP+R D++P +I LP + + D + RVRL+GTAL+D L D++G+ + E+P + + R +V + R PLR Y Q E+ L PL+T +DM++
Sbjct: 17 IDPLLAFQDARLREMFAYWQSKRGGRPFPARTDVSPGDIVNHLPSVFLIDARPPALTLSDFRVRLMGTALND-LFARDFTGRSLEGEMPAKSAAALARVFGIVCQLRRPLRLYGAAVFARAQPLTAVEAVLMPLTTGSGSVDMVM 160
BLAST of mRNA_P-wetherbeei_contig14814.2.1 vs. uniprot
Match: UPI00082F961F (PAS domain-containing protein n=1 Tax=Kordiimonas lipolytica TaxID=1662421 RepID=UPI00082F961F) HSP 1 Score: 80.5 bits (197), Expect = 4.760e-16 Identity = 46/131 (35.11%), Postives = 77/131 (58.78%), Query Frame = 1
Query: 85 WNAKRGARPFPSRKDIAPREIEKLLPWINMYDTLDGGKESRVRLIGTALSDALGGGDYSGKPVSELPQLLSKRIQRGINLVLETRAPLRTYAIESAIPGQDFQGNESCLAPLSTNGADIDMIIVVAILQNR 477
W K+G R FP + D+ P + + LP+I + D LDGGK+ R+RL+G++++D LG DY+G +SE P+ L R + L ++ RAP+ Y E A G++ E+ L PLS ++ ++ +++ R
Sbjct: 37 WREKKGDREFPLKSDLHPSLMARYLPYIYIVDILDGGKDYRIRLLGSSVADMLGK-DYTGTLLSETPEELDWRGEI-YGLCMKRRAPV-FYLFELAPFGRETVVTENALFPLSDGDGNLAHLLCMSVEVGR 164
BLAST of mRNA_P-wetherbeei_contig14814.2.1 vs. uniprot
Match: A0A545U1U4_9PROT (PAS domain-containing protein n=1 Tax=Denitrobaculum tricleocarpae TaxID=2591009 RepID=A0A545U1U4_9PROT) HSP 1 Score: 74.3 bits (181), Expect = 1.920e-13 Identity = 45/136 (33.09%), Postives = 71/136 (52.21%), Query Frame = 1
Query: 76 LAYWNAKRGARPFPSRKDIAPREIEKLLPWINMYDTLDGGKESRVRLIGTALSDALGGGDYSGKPVSELP-QLLSKRIQRGINLVLETRAPLRTYAIESAIPGQDFQGNESCLAPLSTNGADIDMIIVVAILQNRK 480
L YW RG R PSR D+ P +I ++LP + + D + + R RLIGT ++ L D++GK +SE+P Q +I V+ + P+ T +DF +E + PLS +GA ++M+ VV +R
Sbjct: 61 LDYWIRIRGERMMPSRADLDPLDIRRILPNVVLIDVANDPLDFRYRLIGTKIASQLNN-DHTGKWMSEIPHQKPPSKIWSSCETVVNEKIPMTTEVPYEG-RNKDFSVSEDIVMPLSADGATVNMLFVVVDFFSRS 194
BLAST of mRNA_P-wetherbeei_contig14814.2.1 vs. uniprot
Match: UPI001A05334E (PAS domain-containing protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI001A05334E) HSP 1 Score: 70.9 bits (172), Expect = 2.510e-12 Identity = 44/127 (34.65%), Postives = 72/127 (56.69%), Query Frame = 1
Query: 82 YWNAKRGARPFPSRKDIAPREIEKLLPWINMYDTLDGGKESRVRLIGTALSDALGGGDYSGKPVSEL---PQLLSKRIQRGINLVLETRAPLRTYAIESAIPGQDFQGNESCLAPLSTNGADIDMII 453
YWNAKRG RP P+R+DI P EI LL ++N+Y+ D ++ +VRL G+ +++ LG D +GK S + P +S + I V + R + ++ A G+ + + PL ++G +DMI+
Sbjct: 26 YWNAKRGDRPAPTRRDIDPVEIPDLLGFVNIYEVQDEPRDFKVRLNGSEVAEMLGQ-DITGKYCSTVISGPDAVSYKTAFDI-CVDQCRPAIVETSL--AFCGKPYMAQTIIVLPLGSDGESVDMIV 148
BLAST of mRNA_P-wetherbeei_contig14814.2.1 vs. uniprot
Match: A0A192IEC9_9HYPH (Uncharacterized protein n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A192IEC9_9HYPH) HSP 1 Score: 68.2 bits (165), Expect = 2.460e-11 Identity = 54/155 (34.84%), Postives = 79/155 (50.97%), Query Frame = 1
Query: 31 IDLELKFFRPELIEFLAYWNAKRGARPFPSRKDIAPREIEK-LLPWINMYDTLDG-GKESRVR--LIGTALSDALGGGDYSGKPVSELPQLLS-KRIQRGINLVLETRAPLRTYAIESAIPGQDFQGNESCLAPLSTNGADIDMIIVVAILQNRK 480
+D EL P L E L W A RG R P+R+D P E + LLP I + D G G ESR R LIGT ++ LG D +G+ E+ + I G VL R P+RT ++ + + + +E+ PLS +G +D I+V L++ +
Sbjct: 17 LDPELAVVSPVLAEALRLWEALRGPRQMPARRDFDPAETPRALLPHILLIDVDAGEGAESRFRWRLIGTHVTTMLGR-DMTGRWFDEIYDAGTLTSITTGPRWVLANRRPVRTVG-QAPVDERSYLRSENLHMPLSDDGRRVDKILVATDLRSIR 169
BLAST of mRNA_P-wetherbeei_contig14814.2.1 vs. uniprot
Match: A0A5J6MLE7_9PROT (Uncharacterized protein n=1 Tax=Hypericibacter terrae TaxID=2602015 RepID=A0A5J6MLE7_9PROT) HSP 1 Score: 67.8 bits (164), Expect = 2.940e-11 Identity = 39/102 (38.24%), Postives = 59/102 (57.84%), Query Frame = 1
Query: 49 FFRPELIEFLAYWNAKRGARPFPSRKDIAPREIEKLLPWINMYDTLDGGKESRVRLIGTALSDALGGGDYSGKPVSELPQLLSKRIQRGINLVLETRAPLRT 354
F+ L + AYW+AKRG RP PSR+D+ PR+I +LLP++++ D R RL+G+ L D +G + SGK V+++ R + +LET L T
Sbjct: 5 FWDDRLADLFAYWSAKRGNRPAPSRRDLDPRDITRLLPFLHLIDVEPEPMRFRHRLVGSELVDMMGR-NVSGKYVTDV------FYGRAADEILETMRSLAT 99 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14814.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14814.2.1 >prot_P-wetherbeei_contig14814.2.1 ID=prot_P-wetherbeei_contig14814.2.1|Name=mRNA_P-wetherbeei_contig14814.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=161bp MFPIEDPKFIIDLELKFFRPELIEFLAYWNAKRGARPFPSRKDIAPREIEback to top mRNA from alignment at P-wetherbeei_contig14814:368..850- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14814.2.1 ID=mRNA_P-wetherbeei_contig14814.2.1|Name=mRNA_P-wetherbeei_contig14814.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=483bp|location=Sequence derived from alignment at P-wetherbeei_contig14814:368..850- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14814:368..850- >mRNA_P-wetherbeei_contig14814.2.1 ID=mRNA_P-wetherbeei_contig14814.2.1|Name=mRNA_P-wetherbeei_contig14814.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=483bp|location=Sequence derived from alignment at P-wetherbeei_contig14814:368..850- (Phaeothamnion wetherbeei SAG_119_79)back to top |