mRNA_P-wetherbeei_contig14814.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14814.1.1 vs. uniprot
Match: A0A3C0TRJ0_9PROT (Uncharacterized protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TRJ0_9PROT) HSP 1 Score: 124 bits (310), Expect = 1.310e-34 Identity = 56/90 (62.22%), Postives = 69/90 (76.67%), Query Frame = 1
Query: 82 YWKAKRGTRLYPGRTDIKPGEITPLLPWTHMHDVISGGEEFRIRLIGTILSDTFGDGNMRGEPISVLPPGVFARVKQGIERVIEARAPVR 351
YW AKR R +P R DI P +I LLPW H+HDV GEE IRL+GT+LS+TFGDG+MRG+P+S LP GV+ARVKQ I V++ARAP+R
Sbjct: 1 YWNAKRAGREFPSREDITPRDIPHLLPWLHLHDVPPSGEEIHIRLVGTMLSETFGDGDMRGKPLSTLPAGVYARVKQAINWVMDARAPIR 90
BLAST of mRNA_P-wetherbeei_contig14814.1.1 vs. uniprot
Match: A0A1G6VIA3_9PROT (PAS domain-containing protein n=2 Tax=Kordiimonas lacus TaxID=637679 RepID=A0A1G6VIA3_9PROT) HSP 1 Score: 56.6 bits (135), Expect = 1.500e-7 Identity = 37/102 (36.27%), Postives = 57/102 (55.88%), Query Frame = 1
Query: 46 KFVRPELHDFLSYWKAKRGTRLYPGRTDIKPGEITPLLPWTHMHDVISGGEEFRIRLIGTILSDTFGDGNMRGEPISVLPPGVF-ARVKQGIERVIEARAPV 348
+F R EL+D WK +G + P ++D KP + LP ++ D+I GG ++R+RLIGT L+ G +M G IS +P + R+ + V+ RAPV
Sbjct: 26 QFTR-ELYDL---WKELKGEQEMPSKSDFKPERMKAYLPNLYIVDIIDGGADYRLRLIGTALTQMVGR-DMTGHLISAVPETQWRGRI---YDTVVRERAPV 119
BLAST of mRNA_P-wetherbeei_contig14814.1.1 vs. uniprot
Match: UPI001FF3FA0F (PAS domain-containing protein n=1 Tax=Kordiimonas sp. A6E486 TaxID=2872312 RepID=UPI001FF3FA0F) HSP 1 Score: 56.6 bits (135), Expect = 1.840e-7 Identity = 29/66 (43.94%), Postives = 34/66 (51.52%), Query Frame = 1
Query: 52 VRPELHDFLSYWKAKRGTR-LYPGRTDIKPGEITPLLPWTHMHDVISGGEEFRIRLIGTILSDTFG 246
P L L +W KR R PGR DI P I PLLP+ + DV GG FR RL GT + + G
Sbjct: 36 THPVLKALLDFWTLKRDARGALPGRADISPSTIKPLLPYIALADVEDGGNNFRFRLFGTRIVEDSG 101
BLAST of mRNA_P-wetherbeei_contig14814.1.1 vs. uniprot
Match: A0A2G4YRY9_9PROT (PAS domain-containing protein n=1 Tax=Paremcibacter congregatus TaxID=2043170 RepID=A0A2G4YRY9_9PROT) HSP 1 Score: 55.8 bits (133), Expect = 3.600e-7 Identity = 31/94 (32.98%), Postives = 50/94 (53.19%), Query Frame = 1
Query: 61 ELHDFLSYWKAKRGTRLYPGRTDIKPGEITPLLPWTHMHDVISGGEEFRIRLIGTILSDTFGDGNMRGEPISVLPPGVFARVKQGIERVIEARA 342
EL +YW AK+G R+ P R+DI+P EI LLP + DV +R+RL+GT + G M G+ + + P + + +++E +A
Sbjct: 25 ELRALYNYWCAKKGDRVMPSRSDIRPAEIVDLLPKVGLIDVEHAPRRYRLRLLGTEVVLALGQ-EMTGKYLDEISPSGSGMAR--LNKLVEHKA 115
BLAST of mRNA_P-wetherbeei_contig14814.1.1 vs. uniprot
Match: UPI00082F961F (PAS domain-containing protein n=1 Tax=Kordiimonas lipolytica TaxID=1662421 RepID=UPI00082F961F) HSP 1 Score: 52.8 bits (125), Expect = 4.840e-6 Identity = 19/54 (35.19%), Postives = 38/54 (70.37%), Query Frame = 1
Query: 85 WKAKRGTRLYPGRTDIKPGEITPLLPWTHMHDVISGGEEFRIRLIGTILSDTFG 246
W+ K+G R +P ++D+ P + LP+ ++ D++ GG+++RIRL+G+ ++D G
Sbjct: 37 WREKKGDREFPLKSDLHPSLMARYLPYIYIVDILDGGKDYRIRLLGSSVADMLG 90
BLAST of mRNA_P-wetherbeei_contig14814.1.1 vs. uniprot
Match: A0A2G4YU93_9PROT (Uncharacterized protein n=2 Tax=Paremcibacter congregatus TaxID=2043170 RepID=A0A2G4YU93_9PROT) HSP 1 Score: 50.1 bits (118), Expect = 4.650e-5 Identity = 24/61 (39.34%), Postives = 33/61 (54.10%), Query Frame = 1
Query: 64 LHDFLSYWKAKRGTRLYPGRTDIKPGEITPLLPWTHMHDVISGGEEFRIRLIGTILSDTFG 246
L YW +K+G RL P R+D+KP E LLP + DV +R RL+GT + + G
Sbjct: 20 LKKVFQYWSSKKGDRLMPSRSDLKPEEFHRLLPQVVLVDVEMDPVRYRARLVGTKVVEAIG 80
BLAST of mRNA_P-wetherbeei_contig14814.1.1 vs. uniprot
Match: UPI00036ABCC3 (PAS domain-containing protein n=1 Tax=Neomegalonema perideroedes TaxID=217219 RepID=UPI00036ABCC3) HSP 1 Score: 50.4 bits (119), Expect = 7.370e-5 Identity = 35/92 (38.04%), Postives = 46/92 (50.00%), Query Frame = 1
Query: 58 PELHDFLSYWKAKRGTRLYPGRTDIKPGEITPLLPWTHMHDVISGGEEFRIRLIGTILSDTFGDGNMRGEPISVLPPGVF-ARVKQGIERVI 330
P+ YW A R RL PGR ++ P EI PLL T + +V + R RL GT L + FG +RG L G A+V+ I RV+
Sbjct: 4 PKTRALYDYWNALRDGRLAPGRNEVDPREIAPLLDSTFILEV-QNADNIRFRLAGTRLCEAFGM-ELRGMSALALWHGEDRAKVRDLILRVV 93 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14814.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14814.1.1 >prot_P-wetherbeei_contig14814.1.1 ID=prot_P-wetherbeei_contig14814.1.1|Name=mRNA_P-wetherbeei_contig14814.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=117bp MPATKDNTFICNTDLKFVRPELHDFLSYWKAKRGTRLYPGRTDIKPGEITback to top mRNA from alignment at P-wetherbeei_contig14814:1..351- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14814.1.1 ID=mRNA_P-wetherbeei_contig14814.1.1|Name=mRNA_P-wetherbeei_contig14814.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=351bp|location=Sequence derived from alignment at P-wetherbeei_contig14814:1..351- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14814:1..351- >mRNA_P-wetherbeei_contig14814.1.1 ID=mRNA_P-wetherbeei_contig14814.1.1|Name=mRNA_P-wetherbeei_contig14814.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=351bp|location=Sequence derived from alignment at P-wetherbeei_contig14814:1..351- (Phaeothamnion wetherbeei SAG_119_79)back to top |