mRNA_P-wetherbeei_contig14799.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14799.1.1
Unique NamemRNA_P-wetherbeei_contig14799.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14799.1.1 vs. uniprot
Match: A0A7X8XJH1_9BURK (Chromosome partition protein Smc n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XJH1_9BURK)

HSP 1 Score: 298 bits (762), Expect = 9.000e-87
Identity = 186/344 (54.07%), Postives = 227/344 (65.99%), Query Frame = 1
Query:  337 IARSETRKKELEADGVLAQEEKIRAEDARVLLKLEGEGLQLQIAEFERLFADGAEAMEEVRRRAADTDAEYALAQKDLDGAENRVRTANNNLNKAQVEAATVEAHVEEALARLGGVPEEADLPTEPKPVEELEKLRAKTNRLRNFLENFGSVNLGAQEDHERLLARYDELYQQVSDLDEGAASLKLIMDEMDAITVVQFKDAYDRVNETFGKMFTDLFQGGTARLELVVPGDMLDSGVEIVACPPGKKLQNLSLLSSGERALSAMAFLLALLTCKPSPMVILDELDAPLDDANVERVANRLLQFSDQSQFLVITHNRKTMEFADHLYGVTMEEPGVSRILSVRL 1368
            I R   R  EL+AD V A  E  RA  AR  L+ EG  LQ+++        +  +A+ EVR+ ++  D      +        R R    +L++ QVE A +EA +E+A  RL  V +  +LP E    + LEK RA+  RLR FLENFGSVNLGA+ED ERL  R+ EL  Q+ DL+E +  LK IM EMD  ++ QF+  +                GG ARLEL  P D+L+SGVEIVACPPGKKLQNL+LLSSGERALSA+ FLL+LLT KPSP+V+LDELDAPLDDANVE+VA RLL+FS  SQFLVITHNRKTMEFAD LYGVTMEEPGVSR+LSV L
Sbjct:  821 IHRVRQRMDELQADQVAAGAEVERATVARRELEREGAELQVRMDLLAGRLLEEEKALAEVRQESSGQDDHLKSLRVSHAEISRRARELGEDLHRHQVELAGLEARLEQARTRLEEVGDLEELPEESAGFD-LEKARAQARRLRGFLENFGSVNLGAREDFERLTTRHVELKAQIEDLEEASDGLKRIMAEMDRASITQFQTVFXXXXXXXXXXXXXXXGGGWARLELCNPEDLLESGVEIVACPPGKKLQNLTLLSSGERALSAIVFLLSLLTHKPSPIVVLDELDAPLDDANVEKVATRLLEFSTSSQFLVITHNRKTMEFADRLYGVTMEEPGVSRLLSVEL 1163          
BLAST of mRNA_P-wetherbeei_contig14799.1.1 vs. uniprot
Match: A0A7Z9PTA8_9BACT (Chromosome segregation protein SMC n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9PTA8_9BACT)

HSP 1 Score: 272 bits (695), Expect = 7.670e-86
Identity = 141/223 (63.23%), Postives = 177/223 (79.37%), Query Frame = 1
Query:  706 TEPKPVEELEKLRAKTNRLRNFLENFGSVNLGAQEDHERLLARYDELYQQVSDLDEGAASLKLIMDEMDAITVVQFKDAYDRVNETFGKMFTDLFQGGTARLELVVPGDMLDSGVEIVACPPGKKLQNLSLLSSGERALSAMAFLLALLTCKPSPMVILDELDAPLDDANVERVANRLLQFSDQSQFLVITHNRKTMEFADHLYGVTMEEPGVSRILSVRLTK 1374
            TEP   EE+   + +   L++FL+NFG VNLGA+ED+ERL +R+  L  Q++DL EG  SL+ IM E+D  T   F++ + +VNETF ++F+DLF GG A+LEL  P D L+SGV+IVACPPGK+ QN+ L+SSGERALSA+AFL+ALL CKPSP+VILDELDAPLD+ NVE+VA RLL+FS  SQFLV+THNRKTMEFAD LYGVTM EPGVSR+LSV L +
Sbjct:    8 TEPLSPEEMIGCKTRIGHLKHFLDNFGGVNLGAREDYERLFSRHQGLETQITDLVEGKESLQKIMRELDEATTHLFRETFAKVNETFARLFSDLFGGGHAQLELCDPEDPLESGVDIVACPPGKRRQNMMLMSSGERALSAIAFLMALLACKPSPIVILDELDAPLDERNVEKVATRLLEFSTSSQFLVVTHNRKTMEFADLLYGVTMTEPGVSRVLSVELAE 230          
BLAST of mRNA_P-wetherbeei_contig14799.1.1 vs. uniprot
Match: A0A355TVV0_9BACT (SMC_N domain-containing protein (Fragment) n=1 Tax=bacterium UBP9_UBA11836 TaxID=2060920 RepID=A0A355TVV0_9BACT)

HSP 1 Score: 266 bits (681), Expect = 1.510e-80
Identity = 164/382 (42.93%), Postives = 237/382 (62.04%), Query Frame = 1
Query:  232 EMRLRAQRDIIQRRLIDVQVDYERKRQMMQETEREIARSETRKKELEADGVLAQEEKIRAEDARVLLKLEGEGLQLQIAEFERLFADGAEAMEEVRRRAADTDAEYALAQKDLDGAENRVRTANNNLNKAQVEAATVEAHVEEALARLGGVPEEADLPTEPKPVE-ELEKLRAKTNRLRNFLENFGSVNLGAQEDHERLLARYDELYQQVSDLDEGAASLKLIMDEMDAITVVQFKDAYDRVNETFGKMFTDLFQGGTARLELVVPGDMLDSGVEIVACPPGKKLQNLSLLSSGERALSAMAFLLALLTCKPSPMVILDELDAPLDDANVERVANRLLQFSDQSQFLVITHNRKTMEFADHLYGVTMEEPGVSRILSVRLTK 1374
            E +L A+R  ++ RLI+ Q+  +  ++ +   ERE++  +    EL+ D   AQ        A+V  + EGE L   IAE +       + +          +++    +++   A  + R     L+ A V   T ++      AR     +       P+  E  + ++  + ++LRN+L NFGSVNLGA+E++ERL AR DEL  Q+SD+++ +   + I+ EMD   V +FK  +++VN TF  +F ++F GG A+LEL  P D L+SGV+I ACPPGKK+QNL+L SSGERALSA++FL ALLT KPSP+VI DELDAPLDDANVE++A +LL F+  SQFL++THNRKTMEFA  LYGVTM++PGVSR+LSV + K
Sbjct:   89 ETQLTAKRSALKVRLIEEQMRLKNAQEALVARERELSNLQRNLDELDEDAQRAQAXXXXLAAAQVRTQSEGENLTRSIAEKQERLRQAIQELXXASSVLXXXNSKLLQIRQEQAKAARQARELGEALSSAVVNKETWQSRFRVEQARWQDYAQSHYDTQAPEFGEVNVTEVAGQASKLRNYLANFGSVNLGAREEYERLKARLDELNAQISDIEQASEGFRRIIAEMDQALVTRFKQVFNQVNRTFSAIFQNIFGGGWAKLELCDPEDWLESGVDICACPPGKKMQNLTLFSSGERALSAISFLFALLTHKPSPVVIFDELDAPLDDANVEKIARKLLDFAASSQFLIVTHNRKTMEFAQRLYGVTMDKPGVSRLLSVTMEK 470          
BLAST of mRNA_P-wetherbeei_contig14799.1.1 vs. uniprot
Match: A0A7V3UJ49_9BACT (Chromosome segregation protein SMC n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V3UJ49_9BACT)

HSP 1 Score: 206 bits (523), Expect = 8.190e-59
Identity = 124/339 (36.58%), Postives = 200/339 (59.00%), Query Frame = 1
Query:  412 EDARVLLKLEGEGLQLQIAEFERLFADGAEAMEEVRRRAADTDAEYALAQKDLDGAENRV-------RTANNNLNKAQVEAATVEAHVEEALARL-------------GGVPEEADLPTEPKPVEELEKLRAKTNRLRNFLENFGSVNLGAQEDHERLLARYDELYQQVSDLDEGAASLKLIMDEMDAITVVQFKDAYDRVNETFGKMFTDLFQGGTARLELVVPGDMLDSGVEIVACPPGKKLQNLSLLSSGERALSAMAFLLALLTCKPSPMVILDELDAPLDDANVERVANRLLQFSDQSQFLVITHNRKTMEFADHLYGVTMEEPGVSRILSVRL 1368
            ++ R+  +   E  Q+ + E +      + + E++ +     D +Y LA ++L+GAE  +       R A+  L   ++++A +  +++    R+             GG  E + LP    P     ++      L+  L N G+VNL A E+++ L  RY  L  Q +DL E   SL   + ++D  T  +F +A++ VN +F ++F  LF+GG+A L L  PG++L++G+EI+A P GK+LQ +SL+S GE+AL+++A L ++   KPSP  ILDE+DAPLD+ANV+R  N L   S  +QF++ITHN++TME A+ +YGVTMEEPGVS+I+SV+L
Sbjct:    4 QERRITAQNRQEEYQIAVQETQDTLESLSGSKEKLEKMERIHDEKYVLASRELEGAEQALKQREEAYRVAHEKLKMEEIKSAELRVNLDHIKERIISELGVSLEAWEGGGAAEASSLP----PPHFEREIEESIEHLKGKLANLGNVNLAALEEYQALQERYSFLSGQQADLTESMNSLYATIQKIDTTTETRFMEAFNTVNTSFKEVFQKLFEGGSAELRLTEPGNLLETGIEILAQPSGKRLQKISLMSGGEKALTSIALLFSIFLIKPSPFCILDEVDAPLDEANVDRFLNLLRDLSRTTQFIIITHNKRTMETANLMYGVTMEEPGVSKIVSVQL 338          
BLAST of mRNA_P-wetherbeei_contig14799.1.1 vs. uniprot
Match: UPI0010F389B8 (chromosome segregation protein SMC n=1 Tax=Zhaonella formicivorans TaxID=2528593 RepID=UPI0010F389B8)

HSP 1 Score: 216 bits (551), Expect = 6.310e-58
Identity = 111/218 (50.92%), Postives = 161/218 (73.85%), Query Frame = 1
Query:  721 VEELEKLRAKTNRLRNFLENFGSVNLGAQEDHERLLARYDELYQQVSDLDEGAASLKLIMDEMDAITVVQFKDAYDRVNETFGKMFTDLFQGGTARLELVVPGDMLDSGVEIVACPPGKKLQNLSLLSSGERALSAMAFLLALLTCKPSPMVILDELDAPLDDANVERVANRLLQFSDQSQFLVITHNRKTMEFADHLYGVTMEEPGVSRILSVRLTK 1374
            +++L ++  +  +LR  L + GSVNL A E+++RL  R+D L +Q  DL E   +L  +++E+DAI V +F D Y ++ + F ++F +LF GG A+LEL  P ++L++G+EI+A PPGKKLQNL+LLS GERAL+A+A L A+L  KPSP  +LDE++A LD+ANV+R A  L  FS ++QF+VI+H + T+E AD LYGVTMEE GVS++LSVRLT+
Sbjct:  969 IDDLAEINNRVRKLRRDLNSLGSVNLSAMEEYQRLRERHDFLCKQEQDLKEAKIALDKVIEEIDAIMVKRFADTYQKLGQAFSQVFRELFGGGNAKLELTEPENLLETGIEIIAQPPGKKLQNLTLLSGGERALTAIALLFAILRVKPSPFCVLDEIEASLDEANVDRFAEFLKVFSQKTQFIVISHRQGTIEAADALYGVTMEESGVSKLLSVRLTE 1186          
BLAST of mRNA_P-wetherbeei_contig14799.1.1 vs. uniprot
Match: A0A5C8MTV6_9BACI (Chromosome segregation protein SMC (Fragment) n=1 Tax=Parageobacillus sp. SY1 TaxID=2603622 RepID=A0A5C8MTV6_9BACI)

HSP 1 Score: 200 bits (508), Expect = 7.010e-57
Identity = 105/221 (47.51%), Postives = 152/221 (68.78%), Query Frame = 1
Query:  727 ELEKLRAKTNRLRNFLENFGSVNLGAQEDHERLLARYDELYQQVSDLDEGAASLKLIMDEMDAITVVQFKDAYDRVNETFGKMFTDLFQGGTARLELVVPGDMLDSGVEIVACPPGKKLQNLSLLSSGERALSAMAFLLALLTCKPSPMVILDELDAPLDDANVERVANRLLQFSDQSQFLVITHNRKTMEFADHLYGVTMEEPGVSRILSVRLTKDGEMV 1389
            ++++ R +   ++  ++  G+VNLGA +++ER+  RY  L +Q +DL +   +L  ++DEMD     +F    + +   FG +F  LF GG A L L  P D+L++G+EIVA PPGKKLQNLSLLS GERAL+A+A L ++L  +P P  +LDE++A LD+A+V R A  L QFSDQ+QF+VITH + TME AD LYGVTM+E GVS+++SVRL    ++V
Sbjct:   95 DVQEARKRVKLIKRAIDELGTVNLGAIDEYERVSERYQFLTEQKADLQQAKETLHQVIDEMDQEMKKRFLSTCEHIRSHFGDVFRQLFGGGNADLRLTNPDDLLETGIEIVAQPPGKKLQNLSLLSGGERALTAIALLFSILKVRPVPFCVLDEVEAALDEADVHRYAQYLKQFSDQTQFIVITHRKGTMEEADVLYGVTMQESGVSKLVSVRLEDSKQLV 315          
BLAST of mRNA_P-wetherbeei_contig14799.1.1 vs. uniprot
Match: A0A7C3IBV6_9BACT (Chromosome partition protein Smc n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7C3IBV6_9BACT)

HSP 1 Score: 213 bits (543), Expect = 7.390e-57
Identity = 131/319 (41.07%), Postives = 191/319 (59.87%), Query Frame = 1
Query:  439 EGEGLQLQIAEFERLFADGAEAMEEVRRRAADTDAEYALAQKDLDGAENRVRTANNNLNKAQVEAATVEAHVEEALARL----GGVPEEADLPTEPKPVEELEKLRAKTNRLRNFLENFGSVNLGAQEDHERLLARYDELYQQVSDLDEGAASLKLIMDEMDAITVVQFKDAYDRVNETFGKMFTDLFQGGTARLELVVPGDMLDSGVEIVACPPGKKLQNLSLLSSGERALSAMAFLLALLTCKPSPMVILDELDAPLDDANVERVANRLLQFSDQSQFLVITHNRKTMEFADHLYGVTMEEPGVSRILSVRLTKDGE 1383
            E + L  +++  E   AD    +  +  + A+    Y+    +L    +R   A+ ++    V+ A +E  + +A  RL    G   EEA   +EP  VE      A+  RLR  +   G VN GA ++++R+  RY+ L  Q +DL++  A L+  + E+D  T   F   +  V+E F  MF  LF GG+  L L  P ++ ++G+E++   PGK+LQN++LLS GERAL+A+A L ALL  +PSP V+LDE+DAPLDDAN+ER A+ L +FS  +QF+VITHNR TME AD LYGVTMEEPGVS+++SVRL  + E
Sbjct:  868 ERDELVQKLSSEESYLADAQNRLNILTEKRAEVSVRYSTIDSELKSLNHRRSEASESIRSCDVKEARLEVQIAQAAERLQEEYGMSAEEALARSEPAEVER--GTAAEVARLRREIRAMGIVNTGAVQEYQRISERYEFLVSQRADLEDARAKLQEGISEIDKSTRDLFMGTFRSVSEYFDIMFKRLFGGGSTELTLTDPSNLTETGIEVIVQIPGKRLQNMTLLSGGERALTAVALLFALLMARPSPFVLLDEVDAPLDDANIERFADVLREFSHNTQFIVITHNRATMEAADTLYGVTMEEPGVSKLISVRLADESE 1184          
BLAST of mRNA_P-wetherbeei_contig14799.1.1 vs. uniprot
Match: A0A0B0D264_9BACI (Chromosome segregation protein SMC (Fragment) n=1 Tax=Halobacillus sp. BBL2006 TaxID=1543706 RepID=A0A0B0D264_9BACI)

HSP 1 Score: 209 bits (532), Expect = 8.860e-56
Identity = 108/224 (48.21%), Postives = 162/224 (72.32%), Query Frame = 1
Query:  718 PVEELEKLRAKTNRLRNFLENFGSVNLGAQEDHERLLARYDELYQQVSDLDEGAASLKLIMDEMDAITVVQFKDAYDRVNETFGKMFTDLFQGGTARLELVVPGDMLDSGVEIVACPPGKKLQNLSLLSSGERALSAMAFLLALLTCKPSPMVILDELDAPLDDANVERVANRLLQFSDQSQFLVITHNRKTMEFADHLYGVTMEEPGVSRILSVRLTKDGEMV 1389
            PVE++++   +   ++  +E  G+VNLGA ++++R++ RYD L  Q  DL E   +L  +++EMD     +F D + ++ + FG++F DLF GG A L+L  PG+ML++GV+IVA PPGKKLQNLSLLS GERAL+A+A L ++L  +P P  +LDE++A LD+ANV+R A  L +FS ++QF+VITH + TME +D LYGVTM+E GVS+++SVRL +  E++
Sbjct:  706 PVEDIDRASTQVKLIKRSIEELGTVNLGAIDEYDRIVERYDFLKGQQDDLLEAKQTLHTVINEMDGEMDRRFTDTFTKIRDEFGEVFRDLFGGGRADLQLTDPGNMLETGVDIVAQPPGKKLQNLSLLSGGERALTAIALLFSILRVRPVPFCVLDEVEAALDEANVDRFARFLKEFSAKTQFIVITHRKGTMEESDVLYGVTMQESGVSKLVSVRLEETPELL 929          
BLAST of mRNA_P-wetherbeei_contig14799.1.1 vs. uniprot
Match: UPI001FD3D9DC (chromosome segregation protein SMC n=2 Tax=unclassified Halobacillus TaxID=2636472 RepID=UPI001FD3D9DC)

HSP 1 Score: 210 bits (534), Expect = 1.140e-55
Identity = 111/223 (49.78%), Postives = 160/223 (71.75%), Query Frame = 1
Query:  721 VEELEKLRAKTNRLRNFLENFGSVNLGAQEDHERLLARYDELYQQVSDLDEGAASLKLIMDEMDAITVVQFKDAYDRVNETFGKMFTDLFQGGTARLELVVPGDMLDSGVEIVACPPGKKLQNLSLLSSGERALSAMAFLLALLTCKPSPMVILDELDAPLDDANVERVANRLLQFSDQSQFLVITHNRKTMEFADHLYGVTMEEPGVSRILSVRLTKDGEMV 1389
            VE+++    K   ++  +E  G+VNLGA E+++R++ RYD L  Q +DL E   +L  I+ EMD+    +F D + ++   FG++F DLF GG A L+L  P DML++GV+IVA PPGKKLQNLSLLS GERAL+A+A L ++L  +P P  +LDE++A LD+ANV+R A  L +FS+++QF+VITH + TME +D LYGVTM+E GVS+++SVRL +  E+V
Sbjct:  964 VEDVKTTSTKVKLIKRAIEELGTVNLGAIEEYDRIVERYDFLTGQQTDLLEAKETLHSIIREMDSEMERRFDDTFTKIRSEFGEVFKDLFGGGKADLQLTKPDDMLETGVDIVAQPPGKKLQNLSLLSGGERALTAIALLFSILRVRPVPFCVLDEVEAALDEANVDRFAKFLKEFSERTQFIVITHRKGTMEESDVLYGVTMQESGVSKLVSVRLEETAELV 1186          
BLAST of mRNA_P-wetherbeei_contig14799.1.1 vs. uniprot
Match: A0A553SP32_NIACI (Chromosome partition protein Smc n=4 Tax=Bacillaceae TaxID=186817 RepID=A0A553SP32_NIACI)

HSP 1 Score: 209 bits (533), Expect = 1.540e-55
Identity = 133/300 (44.33%), Postives = 186/300 (62.00%), Query Frame = 1
Query:  520 RRAADTDAEYALAQKDLDGAENR---------VRTANNNLNKAQVEAATVEAHV-EEALARLGGVPEEADLPTEPKPVEELEKLRAKTNRLRNFLENFGSVNLGAQEDHERLLARYDELYQQVSDLDEGAASLKLIMDEMDAITVVQFKDAYDRVNETFGKMFTDLFQGGTARLELVVPGDMLDSGVEIVACPPGKKLQNLSLLSSGERALSAMAFLLALLTCKPSPMVILDELDAPLDDANVERVANRLLQFSDQSQFLVITHNRKTMEFADHLYGVTMEEPGVSRILSVRLTKDGEMV 1389
            RRA     +  L + DLD  E R         ++     LN+  VE  T  +++ EE +    G  EE  L  +      LE  R K   ++  +E  G+VNLGA E++ER+  RYD L +Q +DL+E   +L L++DEMD     +F+  ++ +   F  +F  LF GG A L L  P D+L++GV+IVA PPGKKLQNLSLLS GERAL+A+A L A+L  +P P  ILDE++A LD+ANV R ++ L  +SD++QF+VITH + TME AD LYGVTM+E GVSR++SVRL++  E+V
Sbjct:  893 RRAERLQLQMQLDEMDLDVKETRRIHRGIVQALKDEEVKLNRIDVELDTRLSNLREEYMMSFEGAKEEYPLTLD------LEDARKKVKLIKLAMEELGTVNLGAIEEYERISERYDFLLEQKTDLEEAKDTLYLVIDEMDDEMKKRFQQTFEGIQSHFEGVFQRLFGGGHAALRLTNPDDLLNTGVDIVAQPPGKKLQNLSLLSGGERALTAIALLFAILKVRPVPFCILDEVEAALDEANVFRFSSYLKAYSDETQFIVITHRKGTMEEADVLYGVTMQESGVSRLVSVRLSETSELV 1186          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14799.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X8XJH1_9BURK9.000e-8754.07Chromosome partition protein Smc n=1 Tax=Burkholde... [more]
A0A7Z9PTA8_9BACT7.670e-8663.23Chromosome segregation protein SMC n=1 Tax=Phycisp... [more]
A0A355TVV0_9BACT1.510e-8042.93SMC_N domain-containing protein (Fragment) n=1 Tax... [more]
A0A7V3UJ49_9BACT8.190e-5936.58Chromosome segregation protein SMC n=1 Tax=bacteri... [more]
UPI0010F389B86.310e-5850.92chromosome segregation protein SMC n=1 Tax=Zhaonel... [more]
A0A5C8MTV6_9BACI7.010e-5747.51Chromosome segregation protein SMC (Fragment) n=1 ... [more]
A0A7C3IBV6_9BACT7.390e-5741.07Chromosome partition protein Smc n=1 Tax=Armatimon... [more]
A0A0B0D264_9BACI8.860e-5648.21Chromosome segregation protein SMC (Fragment) n=1 ... [more]
UPI001FD3D9DC1.140e-5549.78chromosome segregation protein SMC n=2 Tax=unclass... [more]
A0A553SP32_NIACI1.540e-5544.33Chromosome partition protein Smc n=4 Tax=Bacillace... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14799contigP-wetherbeei_contig14799:143..1531 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1408303.JNJJ01000001_gene3718
Preferred namesmc
PFAMsSMC_N,SMC_hinge
Model size1389
Max annot lvl91061|Bacilli
KEGG koko:K03529
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005515,GO:0042802
Exons1
Evalue1.81e-54
EggNOG OGsCOG1196@1|root,COG1196@2|Bacteria,1TPJV@1239|Firmicutes,4HB89@91061|Bacilli,1ZAWM@1386|Bacillus
DescriptionRequired for chromosome condensation and partitioning
Cds size1389
COG categoryD
BRITEko00000,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186033.6062765-CDS-P-wetherbeei_contig14799:142..15311683186033.6062765-CDS-P-wetherbeei_contig14799:142..1531Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14799 143..1531 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14799.1.1prot_P-wetherbeei_contig14799.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14799 143..1531 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14799.1.1

>prot_P-wetherbeei_contig14799.1.1 ID=prot_P-wetherbeei_contig14799.1.1|Name=mRNA_P-wetherbeei_contig14799.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=463bp
MRLLKQESADDAADTRRRQADLDRATKGLKKAEEEMDALMNREVAAIQEL
KKIEERLLEIEEEKEETEEELSRFQEEEMRLRAQRDIIQRRLIDVQVDYE
RKRQMMQETEREIARSETRKKELEADGVLAQEEKIRAEDARVLLKLEGEG
LQLQIAEFERLFADGAEAMEEVRRRAADTDAEYALAQKDLDGAENRVRTA
NNNLNKAQVEAATVEAHVEEALARLGGVPEEADLPTEPKPVEELEKLRAK
TNRLRNFLENFGSVNLGAQEDHERLLARYDELYQQVSDLDEGAASLKLIM
DEMDAITVVQFKDAYDRVNETFGKMFTDLFQGGTARLELVVPGDMLDSGV
EIVACPPGKKLQNLSLLSSGERALSAMAFLLALLTCKPSPMVILDELDAP
LDDANVERVANRLLQFSDQSQFLVITHNRKTMEFADHLYGVTMEEPGVSR
ILSVRLTKDGEMV
back to top

mRNA from alignment at P-wetherbeei_contig14799:143..1531+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14799.1.1 ID=mRNA_P-wetherbeei_contig14799.1.1|Name=mRNA_P-wetherbeei_contig14799.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1389bp|location=Sequence derived from alignment at P-wetherbeei_contig14799:143..1531+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCGCCTCCTCAAGCAAGAGTCCGCCGACGACGCCGCCGACACGCGCCG CCGCCAGGCCGATCTCGACCGCGCCACCAAGGGGCTGAAAAAGGCCGAAG AAGAGATGGACGCTCTGATGAACCGCGAGGTCGCGGCCATTCAAGAGCTC AAAAAGATTGAAGAGCGCCTCCTGGAGATCGAAGAAGAGAAAGAGGAGAC CGAAGAAGAGCTCTCCCGCTTCCAGGAAGAGGAGATGCGTCTGCGCGCCC AGCGCGACATCATCCAGCGCCGCCTGATCGACGTCCAGGTCGACTACGAG CGCAAGCGCCAGATGATGCAGGAGACCGAGCGCGAGATCGCTCGCTCCGA GACCCGCAAAAAGGAGCTCGAGGCCGACGGGGTGCTCGCCCAGGAAGAAA AGATTCGCGCCGAGGACGCCCGCGTGCTCCTCAAGCTCGAGGGCGAAGGC CTGCAGTTGCAGATCGCCGAGTTCGAGCGCCTCTTTGCCGATGGTGCCGA GGCTATGGAAGAAGTGCGCCGCCGCGCCGCCGATACCGACGCCGAGTATG CCCTGGCCCAAAAGGATCTGGATGGCGCCGAGAACCGCGTGCGCACGGCC AACAACAATCTTAATAAAGCTCAGGTCGAAGCCGCCACGGTGGAAGCCCA CGTGGAGGAAGCGCTGGCTCGTCTGGGTGGCGTGCCCGAGGAGGCCGATC TGCCGACCGAGCCCAAGCCCGTCGAAGAGCTCGAGAAGCTGCGCGCCAAG ACCAATCGTCTGCGCAATTTCCTGGAGAACTTCGGCAGCGTCAATCTGGG CGCTCAAGAAGACCACGAGCGCCTGCTGGCTCGCTACGATGAGCTCTATC AGCAGGTCTCCGATCTCGATGAGGGCGCCGCCAGCCTCAAGCTGATTATG GACGAGATGGACGCCATCACCGTGGTCCAGTTCAAGGACGCCTACGACCG CGTCAACGAGACCTTCGGCAAGATGTTCACCGATCTGTTCCAGGGAGGCA CGGCGCGTCTCGAACTCGTGGTGCCCGGCGATATGCTGGATTCCGGCGTG GAAATCGTGGCCTGCCCGCCCGGCAAGAAGCTACAGAACCTGAGTCTACT GTCCTCGGGCGAACGCGCGCTCTCGGCGATGGCCTTCCTGCTCGCGCTGC TGACCTGCAAACCGAGCCCGATGGTCATCCTGGACGAGCTGGACGCCCCT CTCGACGATGCCAACGTGGAGCGTGTGGCCAATCGCCTGCTGCAGTTCTC CGACCAGTCCCAGTTTCTGGTCATCACCCACAATCGCAAAACCATGGAAT TTGCCGATCATCTCTACGGCGTCACGATGGAGGAGCCGGGCGTCAGCCGC ATCCTCTCCGTACGCCTCACCAAGGATGGGGAGATGGTT
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig14799:143..1531+

>mRNA_P-wetherbeei_contig14799.1.1 ID=mRNA_P-wetherbeei_contig14799.1.1|Name=mRNA_P-wetherbeei_contig14799.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1389bp|location=Sequence derived from alignment at P-wetherbeei_contig14799:143..1531+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCGCCTCCTCAAGCAAGAGTCCGCCGACGACGCCGCCGACACGCGCCG
CCGCCAGGCCGATCTCGACCGCGCCACCAAGGGGCTGAAAAAGGCCGAAG
AAGAGATGGACGCTCTGATGAACCGCGAGGTCGCGGCCATTCAAGAGCTC
AAAAAGATTGAAGAGCGCCTCCTGGAGATCGAAGAAGAGAAAGAGGAGAC
CGAAGAAGAGCTCTCCCGCTTCCAGGAAGAGGAGATGCGTCTGCGCGCCC
AGCGCGACATCATCCAGCGCCGCCTGATCGACGTCCAGGTCGACTACGAG
CGCAAGCGCCAGATGATGCAGGAGACCGAGCGCGAGATCGCTCGCTCCGA
GACCCGCAAAAAGGAGCTCGAGGCCGACGGGGTGCTCGCCCAGGAAGAAA
AGATTCGCGCCGAGGACGCCCGCGTGCTCCTCAAGCTCGAGGGCGAAGGC
CTGCAGTTGCAGATCGCCGAGTTCGAGCGCCTCTTTGCCGATGGTGCCGA
GGCTATGGAAGAAGTGCGCCGCCGCGCCGCCGATACCGACGCCGAGTATG
CCCTGGCCCAAAAGGATCTGGATGGCGCCGAGAACCGCGTGCGCACGGCC
AACAACAATCTTAATAAAGCTCAGGTCGAAGCCGCCACGGTGGAAGCCCA
CGTGGAGGAAGCGCTGGCTCGTCTGGGTGGCGTGCCCGAGGAGGCCGATC
TGCCGACCGAGCCCAAGCCCGTCGAAGAGCTCGAGAAGCTGCGCGCCAAG
ACCAATCGTCTGCGCAATTTCCTGGAGAACTTCGGCAGCGTCAATCTGGG
CGCTCAAGAAGACCACGAGCGCCTGCTGGCTCGCTACGATGAGCTCTATC
AGCAGGTCTCCGATCTCGATGAGGGCGCCGCCAGCCTCAAGCTGATTATG
GACGAGATGGACGCCATCACCGTGGTCCAGTTCAAGGACGCCTACGACCG
CGTCAACGAGACCTTCGGCAAGATGTTCACCGATCTGTTCCAGGGAGGCA
CGGCGCGTCTCGAACTCGTGGTGCCCGGCGATATGCTGGATTCCGGCGTG
GAAATCGTGGCCTGCCCGCCCGGCAAGAAGCTACAGAACCTGAGTCTACT
GTCCTCGGGCGAACGCGCGCTCTCGGCGATGGCCTTCCTGCTCGCGCTGC
TGACCTGCAAACCGAGCCCGATGGTCATCCTGGACGAGCTGGACGCCCCT
CTCGACGATGCCAACGTGGAGCGTGTGGCCAATCGCCTGCTGCAGTTCTC
CGACCAGTCCCAGTTTCTGGTCATCACCCACAATCGCAAAACCATGGAAT
TTGCCGATCATCTCTACGGCGTCACGATGGAGGAGCCGGGCGTCAGCCGC
ATCCTCTCCGTACGCCTCACCAAGGATGGGGAGATGGTT
back to top