prot_P-wetherbeei_contig14790.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig14790.1.1
Unique Nameprot_P-wetherbeei_contig14790.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length87
Homology
BLAST of mRNA_P-wetherbeei_contig14790.1.1 vs. uniprot
Match: A0A836C7M6_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7M6_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 1.510e-18
Identity = 47/90 (52.22%), Postives = 61/90 (67.78%), Query Frame = 0
Query:    2 VRCPADPETEG----LNGQTVLVQLPS-VTGTVRELKELLAPQVGG-MAANRQQLRDASRGFLKDSQSLASYNLAGDVHLELVPRSRGGR 85
            V+CPAD + E     L GQ V V L + V  TV+ELK+ L   +GG M AN+ QLRD +RGFL+D+ +LA+YNL G   ++LVPR RGGR
Sbjct:   20 VQCPADDQGEAAAWNLTGQVVPVTLSAGVRATVKELKDALGAALGGAMPANKAQLRDGARGFLRDAATLAAYNLGGGAVVDLVPRKRGGR 109          
BLAST of mRNA_P-wetherbeei_contig14790.1.1 vs. uniprot
Match: K8Z790_NANGC (Splicing factor 3A subunit 1 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z790_NANGC)

HSP 1 Score: 79.7 bits (195), Expect = 1.470e-15
Identity = 45/81 (55.56%), Postives = 57/81 (70.37%), Query Frame = 0
Query:   10 TEGLNGQTVLVQLPSVTGTVRELKELLAPQVGGMAANRQQLRDASRG-FLKDSQSLASYNLAG---DVHLELVPRSRGGRR 86
            T  L GQ V +++ SV  TVRE+KE L+P +GGM  N+ QLR+A +G FLKD+Q+LASYNL        LELV RSRGGR+
Sbjct:  351 TWNLKGQLVKLEIGSVMSTVREVKEQLSPLLGGMPPNKMQLRNAEQGVFLKDAQTLASYNLGAAGSSTVLELVTRSRGGRK 431          
BLAST of mRNA_P-wetherbeei_contig14790.1.1 vs. uniprot
Match: A0A4D9CLT9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CLT9_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 1.700e-15
Identity = 45/81 (55.56%), Postives = 57/81 (70.37%), Query Frame = 0
Query:   10 TEGLNGQTVLVQLPSVTGTVRELKELLAPQVGGMAANRQQLRDASRG-FLKDSQSLASYNLAG---DVHLELVPRSRGGRR 86
            T  L GQ V +++ SV  TVRE+KE L+P +GGM  N+ QLR+A +G FLKD+Q+LASYNL        LELV RSRGGR+
Sbjct:  665 TWNLKGQLVKLEIGSVMSTVREVKEQLSPLLGGMPPNKMQLRNAEQGVFLKDAQTLASYNLGAAGSSTVLELVTRSRGGRK 745          
BLAST of mRNA_P-wetherbeei_contig14790.1.1 vs. uniprot
Match: A0A7S3LZ45_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LZ45_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 3.050e-13
Identity = 42/81 (51.85%), Postives = 55/81 (67.90%), Query Frame = 0
Query:    8 PETEGLNGQTVLVQLPSVTGTVRELKELLAPQVGGMAANRQQLRD--ASRGFLKDSQSLASYNLAGDVHLELVPRSRGGRR 86
            P T  L GQTV V +  VT +V++LKELL+ Q+GGM AN+QQL+   A  GFLKD+ SLA  N+     LE+  +SRGG+R
Sbjct:  335 PATWNLQGQTVTVAV-KVTDSVKQLKELLSIQLGGMPANKQQLKASAAGLGFLKDANSLAELNVGDGAVLEMTLKSRGGKR 414          
BLAST of mRNA_P-wetherbeei_contig14790.1.1 vs. uniprot
Match: B8BS45_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BS45_THAPS)

HSP 1 Score: 68.2 bits (165), Expect = 1.960e-11
Identity = 38/88 (43.18%), Postives = 55/88 (62.50%), Query Frame = 0
Query:    2 VRCPADPETEG--LNGQTVLVQLPSVTGTVRELKELLAPQVGGMAANRQQLRDASRGFL-KDSQSLASYNLAGDVHLELVPRSRGGRR 86
            VR P D    G   NGQT+ +  P  T TV+E+K +L  Q+GGM  N+ QL+    GF+ KD  +LA +N+   + L+LVP++RGGR+
Sbjct:  678 VRIPYDASNAGWNFNGQTIDLS-PGATTTVKEVKAMLKEQLGGMPINKMQLKHPDSGFMNKDGLTLAHFNVGPGMTLDLVPKTRGGRK 764          
BLAST of mRNA_P-wetherbeei_contig14790.1.1 vs. uniprot
Match: C1EJ71_MICCC (Uncharacterized protein n=2 Tax=Micromonas TaxID=38832 RepID=C1EJ71_MICCC)

HSP 1 Score: 63.2 bits (152), Expect = 1.130e-9
Identity = 32/76 (42.11%), Postives = 47/76 (61.84%), Query Frame = 0
Query:   11 EGLNGQTVLVQLPSVTGTVRELKELLAPQVGGMAANRQQLRDASRGFLKDSQSLASYNLAGDVHLELVPRSRGGRR 86
            + LNGQTV + + S++  V ELK+L+    GG+AAN+Q++     GF  D  SLA YN+     L+L  + RGGR+
Sbjct:  631 DNLNGQTVDLNVDSLSTPVSELKKLIKEAAGGLAANKQKISVPGLGFFTDKNSLAYYNIKYGTTLQLSLKERGGRK 706          
BLAST of mRNA_P-wetherbeei_contig14790.1.1 vs. uniprot
Match: A0A7S3VKH4_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3VKH4_DUNTE)

HSP 1 Score: 63.2 bits (152), Expect = 1.140e-9
Identity = 41/85 (48.24%), Postives = 53/85 (62.35%), Query Frame = 0
Query:    2 VRCPADPETEGLNGQTVLVQLPSVTGTVRELKELLAPQVGGMAANRQQLRDASRGFLKDSQSLASYNLAGDVHLELVPRSRGGRR 86
            V+CP     E L GQ + V++ S+  TV ELKE LA  V G+AA+RQ+L     GFL+D  SLA YN+A DV L+L  + RG  R
Sbjct:  745 VQCPEVEGNEKLIGQLLEVEVASLQDTVGELKERLAG-VLGLAASRQKLSRDGVGFLRDEFSLAHYNVAPDVILQLGAKDRGKGR 828          
BLAST of mRNA_P-wetherbeei_contig14790.1.1 vs. uniprot
Match: D8SDB1_SELML (Uncharacterized protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SDB1_SELML)

HSP 1 Score: 62.0 bits (149), Expect = 2.890e-9
Identity = 37/84 (44.05%), Postives = 54/84 (64.29%), Query Frame = 0
Query:    6 ADPETEG---LNGQTVLVQLPSVTGTVRELKELLAPQVGGMAANRQQLRDASRGFLKDSQSLASYNLAGDVHLELVPRSRGGRR 86
            A P  EG   L GQ + + +PSV+ T+  LKE +A ++G + AN+Q+L     GFL+D+QSLA YN+A    L L+ R RGG++
Sbjct:  683 AVPTVEGEGSLKGQVLQLTMPSVSETIASLKEKIAAEIG-LPANKQKL-SGRIGFLRDTQSLAFYNIAPGESLTLLLRERGGKK 764          
BLAST of mRNA_P-wetherbeei_contig14790.1.1 vs. uniprot
Match: A0A7S2SHQ0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SHQ0_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 2.020e-8
Identity = 29/75 (38.67%), Postives = 50/75 (66.67%), Query Frame = 0
Query:   13 LNGQTVLVQLPSVTGTVRELKELLAPQVGG-MAANRQQLRDASRGFLKDSQSLASYNLAGDVHLELVPRSRGGRR 86
            L+GQ V + +  V   ++++KE L  ++GG M  N+ Q+++   GF KD+ +LA  N+  D +LEL+P++RGGR+
Sbjct:  136 LDGQIVKLSI-DVMKNIKDVKEELRLKLGGEMPVNKMQMKNTGSGFAKDAHTLAFLNIGPDGYLELIPKTRGGRK 209          
BLAST of mRNA_P-wetherbeei_contig14790.1.1 vs. uniprot
Match: A0A6A7G513_9CRUS (Splicing factor 3A subunit 1-like (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G513_9CRUS)

HSP 1 Score: 59.3 bits (142), Expect = 2.570e-8
Identity = 31/82 (37.80%), Postives = 51/82 (62.20%), Query Frame = 0
Query:    5 PADPETEGLNGQTVLVQLPSVTGTVRELKELLAPQVGGMAANRQQLRDASRGFLKDSQSLASYNLAGDVHLELVPRSRGGRR 86
            P+ PE    NG T+ +++  +T T+ +LK+ L   +GGM   +Q+LR     F+KD+ +LA YN+  DV  E+  ++RGGR+
Sbjct:  716 PSRPEWN-FNGSTLSIRM-QITNTIIDLKQRLEEYLGGMPMKKQKLRIIGGAFVKDTNTLAYYNVTNDVLFEVGVKARGGRK 795          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14790.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A836C7M6_9STRA1.510e-1852.22Ubiquitin-like domain-containing protein n=1 Tax=T... [more]
K8Z790_NANGC1.470e-1555.56Splicing factor 3A subunit 1 n=1 Tax=Nannochlorops... [more]
A0A4D9CLT9_9STRA1.700e-1555.56Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S3LZ45_9STRA3.050e-1351.85Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
B8BS45_THAPS1.960e-1143.18Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
C1EJ71_MICCC1.130e-942.11Uncharacterized protein n=2 Tax=Micromonas TaxID=3... [more]
A0A7S3VKH4_DUNTE1.140e-948.24Hypothetical protein n=1 Tax=Dunaliella tertiolect... [more]
D8SDB1_SELML2.890e-944.05Uncharacterized protein n=3 Tax=Selaginella moelle... [more]
A0A7S2SHQ0_9STRA2.020e-838.67Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A6A7G513_9CRUS2.570e-837.80Splicing factor 3A subunit 1-like (Fragment) n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.90coord: 1..86
e-value: 1.4E-12
score: 49.5
IPR000626Ubiquitin-like domainPROSITEPS50053UBIQUITIN_2coord: 28..84
score: 10.767145
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 13..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14790contigP-wetherbeei_contig14790:297..557 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14790.1.1mRNA_P-wetherbeei_contig14790.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig14790 200..1144 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig14790.1.1 ID=prot_P-wetherbeei_contig14790.1.1|Name=mRNA_P-wetherbeei_contig14790.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=87bp
MVRCPADPETEGLNGQTVLVQLPSVTGTVRELKELLAPQVGGMAANRQQL
RDASRGFLKDSQSLASYNLAGDVHLELVPRSRGGRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin-like_dom
IPR029071Ubiquitin-like_domsf