mRNA_P-wetherbeei_contig14777.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14777.3.1
Unique NamemRNA_P-wetherbeei_contig14777.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig14777.3.1 vs. uniprot
Match: A0A7X9Q3T7_9ACTN (CoA-binding protein (Fragment) n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A7X9Q3T7_9ACTN)

HSP 1 Score: 254 bits (649), Expect = 8.860e-82
Identity = 137/166 (82.53%), Postives = 152/166 (91.57%), Query Frame = 1 
Query:   25 TLSESSSKQLLRDAGVPLAPEREVATAADAAAAAGELGFPVVVKLCGAAIAHKTERGLVKLRLGDAGAVESASSELLGKATADDGDVSLLVAPMISGNRELIAGLVRDPQFGANVMLGVGGVLAEAVADVVFRPVPVSDVDAQEMIEGLATQKLLGEFRGEAAIDR 522
            TLSE++SK LLR+ GVP+A EREVA AA AA AAGELGFPVVVKLCG AIAHKTERGLVKLRL DA AV +A +ELLGKAT  DG+VSLLVAPMISGNRELIAG+VRDPQFGANVMLGVGGVLAEA+ADVVFRPVP+S +DAQEMI+GLATQ+LLGEFRGEAA++R
Sbjct:    7 TLSEAASKALLREFGVPMAAEREVADAAAAATAAGELGFPVVVKLCGDAIAHKTERGLVKLRLADAAAVAAAGAELLGKATLADGEVSLLVAPMISGNRELIAGVVRDPQFGANVMLGVGGVLAEAIADVVFRPVPLSAIDAQEMIDGLATQQLLGEFRGEAAVNR 172
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BLAST of mRNA_P-wetherbeei_contig14777.3.1 vs. uniprot
Match: A0A6J7QDD6_9ZZZZ (Unannotated protein n=4 Tax=root TaxID=1 RepID=A0A6J7QDD6_9ZZZZ)

HSP 1 Score: 256 bits (653), Expect = 3.810e-78
Identity = 135/167 (80.84%), Postives = 151/167 (90.42%), Query Frame = 1 
Query:   22 HTLSESSSKQLLRDAGVPLAPEREVATAADAAAAAGELGFPVVVKLCGAAIAHKTERGLVKLRLGDAGAVESASSELLGKATADDGDVSLLVAPMISGNRELIAGLVRDPQFGANVMLGVGGVLAEAVADVVFRPVPVSDVDAQEMIEGLATQKLLGEFRGEAAIDR 522
            HTLSES+SK LLR  GVPLAPEREV +A DAAAAA E+GFPVV KLCG AIAHKTERGLVKLRL DA AV +A++ELL KAT  DGDV++LVAPMISGNRELIAG+VRDPQFGANVM+G+GGVLAEA+ADV FRPVP+S +DAQEMI+GLATQKLLGEFRGEAA+DR
Sbjct:   25 HTLSESASKALLRQYGVPLAPEREVRSADDAAAAAAEVGFPVVAKLCGDAIAHKTERGLVKLRLADAAAVHAAAAELLAKATPADGDVTVLVAPMISGNRELIAGIVRDPQFGANVMIGIGGVLAEAIADVQFRPVPLSAIDAQEMIDGLATQKLLGEFRGEAAVDR 191
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BLAST of mRNA_P-wetherbeei_contig14777.3.1 vs. uniprot
Match: A0A6I2YYB2_9ACTN (ATP-grasp domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A6I2YYB2_9ACTN)

HSP 1 Score: 251 bits (640), Expect = 4.630e-76
Identity = 134/166 (80.72%), Postives = 150/166 (90.36%), Query Frame = 1 
Query:   25 TLSESSSKQLLRDAGVPLAPEREVATAADAAAAAGELGFPVVVKLCGAAIAHKTERGLVKLRLGDAGAVESASSELLGKATADDGDVSLLVAPMISGNRELIAGLVRDPQFGANVMLGVGGVLAEAVADVVFRPVPVSDVDAQEMIEGLATQKLLGEFRGEAAIDR 522
            TLSES+SK LLR+ GVPLAPEREV T A+AAAAA ELGFPVVVKLCG AIAHKTERGLV+LRL D  +VE+AS+ELLG A  +DGDV+LLVAPMISG+RELI G+VRDPQFGANVMLGVGGVLAEA+ADVVFRPVP+S VDA EM++GLATQKLL EFRGEAA+DR
Sbjct:   51 TLSESASKSLLREYGVPLAPEREVRTTAEAAAAAVELGFPVVVKLCGDAIAHKTERGLVRLRLSDPASVEAASAELLGSARPEDGDVTLLVAPMISGSRELIVGIVRDPQFGANVMLGVGGVLAEAIADVVFRPVPLSWVDASEMVDGLATQKLLAEFRGEAAVDR 216
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BLAST of mRNA_P-wetherbeei_contig14777.3.1 vs. uniprot
Match: A0A539DSA1_9ACTN (Putative acyl-CoA synthetase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A539DSA1_9ACTN)

HSP 1 Score: 244 bits (623), Expect = 4.340e-75
Identity = 130/166 (78.31%), Postives = 147/166 (88.55%), Query Frame = 1 
Query:   25 TLSESSSKQLLRDAGVPLAPEREVATAADAAAAAGELGFPVVVKLCGAAIAHKTERGLVKLRLGDAGAVESASSELLGKATADDGDVSLLVAPMISGNRELIAGLVRDPQFGANVMLGVGGVLAEAVADVVFRPVPVSDVDAQEMIEGLATQKLLGEFRGEAAIDR 522
            TLSES+SKQLLR  GVP+A EREV TAADAA +A ELGFPVV KLCG AIAHKTERGLV+LRLGDA AVE A+++LL  AT+ DG+VS+LVAPM+SGNRELIAG+VRDPQFGANVMLGVGGVLAEA+ADVVFRPVP+S  DA +MI+ LATQ LLG FRGEAA+DR
Sbjct:    7 TLSESASKQLLRGFGVPMADEREVLTAADAARSAAELGFPVVAKLCGDAIAHKTERGLVRLRLGDAAAVERAATDLLAAATSGDGEVSVLVAPMVSGNRELIAGVVRDPQFGANVMLGVGGVLAEAIADVVFRPVPISAADAADMIDSLATQALLGAFRGEAAVDR 172
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BLAST of mRNA_P-wetherbeei_contig14777.3.1 vs. uniprot
Match: A0A7K1B340_9ACTN (ATP-grasp domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A7K1B340_9ACTN)

HSP 1 Score: 246 bits (629), Expect = 8.780e-75
Identity = 130/167 (77.84%), Postives = 152/167 (91.02%), Query Frame = 1 
Query:   22 HTLSESSSKQLLRDAGVPLAPEREVATAADAAAAAGELGFPVVVKLCGAAIAHKTERGLVKLRLGDAGAVESASSELLGKATADDGDVSLLVAPMISGNRELIAGLVRDPQFGANVMLGVGGVLAEAVADVVFRPVPVSDVDAQEMIEGLATQKLLGEFRGEAAIDR 522
            +TLSES+SK LLR+ GVP+A EREV+TAADAAAAA ELGFPVV KLCG AIAHKTERGLV+LRLGD  AV++A+++LL  AT +DG VS+LVAPM++GNRELIAG+VRDPQFGANVMLGVGGVLAEA+ADVVFRPVP+S+VDA EMI+ LATQ+LLG FRGEAA+DR
Sbjct:    6 NTLSESASKALLREFGVPIADEREVSTAADAAAAAAELGFPVVAKLCGDAIAHKTERGLVRLRLGDPAAVQAAAADLLAAATPEDGPVSVLVAPMVAGNRELIAGVVRDPQFGANVMLGVGGVLAEAIADVVFRPVPLSEVDATEMIDQLATQQLLGAFRGEAAVDR 172
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BLAST of mRNA_P-wetherbeei_contig14777.3.1 vs. uniprot
Match: A0A6I3HN57_9ACTN (CoA-binding protein n=13 Tax=root TaxID=1 RepID=A0A6I3HN57_9ACTN)

HSP 1 Score: 231 bits (588), Expect = 9.020e-69
Identity = 120/174 (68.97%), Postives = 143/174 (82.18%), Query Frame = 1 
Query:    1 MSTHESRHTLSESSSKQLLRDAGVPLAPEREVATAADAAAAAGELGFPVVVKLCGAAIAHKTERGLVKLRLGDAGAVESASSELLGKATADDGDVSLLVAPMISGNRELIAGLVRDPQFGANVMLGVGGVLAEAVADVVFRPVPVSDVDAQEMIEGLATQKLLGEFRGEAAIDR 522
            +ST  +  TLSE++SK LLR AGVP+A EREV TA++AA AA E+GFPVV KLCG AIAHKTERGLV+L+L D  AVE A+ ELL  ATA DG+V++LVAPM+ GNRELI G+VRDPQFGA+VMLG+GG+ AEA+ADVVFRP P+  + A EMI  LATQKLLGEFRGEA +DR
Sbjct:    2 LSTPSTSRTLSEAASKALLRSAGVPMADEREVKTASEAAVAASEIGFPVVAKLCGDAIAHKTERGLVRLKLADVDAVERAAQELLSAATAQDGEVTVLVAPMVQGNRELIVGVVRDPQFGASVMLGIGGIFAEAIADVVFRPAPLDRITAHEMISDLATQKLLGEFRGEACVDR 175
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BLAST of mRNA_P-wetherbeei_contig14777.3.1 vs. uniprot
Match: A0A6I3A4I0_9ACTN (ATP-grasp domain-containing protein n=4 Tax=root TaxID=1 RepID=A0A6I3A4I0_9ACTN)

HSP 1 Score: 229 bits (584), Expect = 3.290e-68
Identity = 125/173 (72.25%), Postives = 144/173 (83.24%), Query Frame = 1 
Query:    4 STHESRHTLSESSSKQLLRDAGVPLAPEREVATAADAAAAAGELGFPVVVKLCGAAIAHKTERGLVKLRLGDAGAVESASSELLGKATADDGDVSLLVAPMISGNRELIAGLVRDPQFGANVMLGVGGVLAEAVADVVFRPVPVSDVDAQEMIEGLATQKLLGEFRGEAAIDR 522
            S H SR TLSES+SK LLR+AGVP+A EREVATA  AA AA E+GFPVV KLCG AIAHKTERGLV+L+L  A AV  A+++LL  A  DDG V++LVAPM+ GNRELIAG+VRDPQFGA+VMLG+GG+LAEA+ADVVFRP P+  V A EMI  LATQKLLGEFRGEAA+DR
Sbjct:    4 SAHHSR-TLSESASKALLREAGVPMADEREVATAELAAQAASEIGFPVVAKLCGDAIAHKTERGLVRLKLASAQAVHEAAADLLAAARPDDGPVTVLVAPMVQGNRELIAGVVRDPQFGASVMLGIGGILAEAIADVVFRPAPLDRVTAHEMIADLATQKLLGEFRGEAAVDR 175
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BLAST of mRNA_P-wetherbeei_contig14777.3.1 vs. uniprot
Match: A0A6N2DP19_9ACTN (ATP-grasp domain-containing protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A6N2DP19_9ACTN)

HSP 1 Score: 229 bits (583), Expect = 4.600e-68
Identity = 121/166 (72.89%), Postives = 141/166 (84.94%), Query Frame = 1 
Query:   25 TLSESSSKQLLRDAGVPLAPEREVATAADAAAAAGELGFPVVVKLCGAAIAHKTERGLVKLRLGDAGAVESASSELLGKATADDGDVSLLVAPMISGNRELIAGLVRDPQFGANVMLGVGGVLAEAVADVVFRPVPVSDVDAQEMIEGLATQKLLGEFRGEAAIDR 522
            TLSE++SK+LL   G+P+ PEREV +AADAA AA  +G+PVV KLCG AIAHKTERGLV+LRLGDAGAV  A+ ELL  AT DDG V++LVAPM+SGNRELIAG++RDPQFG  VMLGVGGVLAEAVADVVFRP P+  V A+EMI+ LATQ+LLGEFRGEA +DR
Sbjct:    7 TLSETASKELLAAYGLPVPPEREVTSAADAAVAAESIGYPVVAKLCGDAIAHKTERGLVRLRLGDAGAVSGAAQELLDAATPDDGAVTVLVAPMVSGNRELIAGMLRDPQFGPTVMLGVGGVLAEAVADVVFRPAPLDRVTAEEMIDDLATQRLLGEFRGEAPVDR 172
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BLAST of mRNA_P-wetherbeei_contig14777.3.1 vs. uniprot
Match: A0A6I3CA76_9ACTN (ATP-grasp domain-containing protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A6I3CA76_9ACTN)

HSP 1 Score: 228 bits (581), Expect = 8.160e-68
Identity = 126/174 (72.41%), Postives = 145/174 (83.33%), Query Frame = 1 
Query:    7 THESR--HTLSESSSKQLLRDAGVPLAPEREVATAADAAAAAGELGFPVVVKLCGAAIAHKTERGLVKLRLGDAGAVESASSELLGKATADDGDVSLLVAPMISGNRELIAGLVRDPQFGANVMLGVGGVLAEAVADVVFRPVPVSDVDAQEMIEGLATQKLLGEFRGEAAIDR 522
            TH S   HTLSES+SK LLR+ GVP+A EREV +A        ELG+PVVVKLCG AIAHKTERGLVKLRL DA AVE+A++ELL KAT +DG VSLLVAPMISGNRELIAG++RD QFGA VMLGVGGVLAEA+ADVVFRP P+S ++A EMI+ LATQKLLG FRGE+A++R
Sbjct:   19 THVSNSGHTLSESASKALLREYGVPIADEREVESAXXXXXXXSELGYPVVVKLCGDAIAHKTERGLVKLRLADAAAVEAAAAELLSKATPEDGPVSLLVAPMISGNRELIAGVLRDAQFGATVMLGVGGVLAEAIADVVFRPAPLSRLEAGEMIDSLATQKLLGAFRGESAVNR 192
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BLAST of mRNA_P-wetherbeei_contig14777.3.1 vs. uniprot
Match: UPI000348E022 (acetate--CoA ligase family protein n=1 Tax=Ilumatobacter nonamiensis TaxID=467093 RepID=UPI000348E022)

HSP 1 Score: 221 bits (563), Expect = 3.490e-65
Identity = 120/168 (71.43%), Postives = 137/168 (81.55%), Query Frame = 1 
Query:   25 TLSESSSKQLLRDAGVPLAPEREVATAADAAAAAGELGFPVVVKLCGAAIAHKTERGLVKLRLGDAGAVESASSELLGKATADDGDVSLLVAPMISGNRELIAGLVRDPQFGANVMLGVGGVLAEAVADVVFRPVPVSDVDAQEMIEGLATQKLLGEFRGEAAIDRVQ 528
            TLSE +SK LL + GVP+APER V +   A AAA E+G+PVV KL G AIAHKTERGLV+LRLGD  AVE A+ +LL  AT DDGDV +LVAPMISGNRELIAG+VRDPQFGA VMLGVGG+LAEAVADVVFRP P+    A +MI+GLATQ+LLGEFRGE A+DR Q
Sbjct:    6 TLSERASKALLAEHGVPIAPERFVTSPGGAGAAADEIGYPVVAKLNGDAIAHKTERGLVRLRLGDRAAVEQAAEDLLAAATPDDGDVDVLVAPMISGNRELIAGVVRDPQFGAMVMLGVGGILAEAVADVVFRPAPLDTPTAADMIDGLATQRLLGEFRGEQAVDRDQ 173
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14777.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X9Q3T7_9ACTN8.860e-8282.53CoA-binding protein (Fragment) n=2 Tax=Actinobacte... [more]
A0A6J7QDD6_9ZZZZ3.810e-7880.84Unannotated protein n=4 Tax=root TaxID=1 RepID=A0A... [more]
A0A6I2YYB2_9ACTN4.630e-7680.72ATP-grasp domain-containing protein n=2 Tax=root T... [more]
A0A539DSA1_9ACTN4.340e-7578.31Putative acyl-CoA synthetase (Fragment) n=1 Tax=Ac... [more]
A0A7K1B340_9ACTN8.780e-7577.84ATP-grasp domain-containing protein n=2 Tax=root T... [more]
A0A6I3HN57_9ACTN9.020e-6968.97CoA-binding protein n=13 Tax=root TaxID=1 RepID=A0... [more]
A0A6I3A4I0_9ACTN3.290e-6872.25ATP-grasp domain-containing protein n=4 Tax=root T... [more]
A0A6N2DP19_9ACTN4.600e-6872.89ATP-grasp domain-containing protein n=1 Tax=Ilumat... [more]
A0A6I3CA76_9ACTN8.160e-6872.41ATP-grasp domain-containing protein (Fragment) n=1... [more]
UPI000348E0223.490e-6571.43acetate--CoA ligase family protein n=1 Tax=Ilumato... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14777contigP-wetherbeei_contig14777:1151..1678 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1313172.YM304_26210
Preferred nameacdA1
PFAMsATP-grasp_5,CoA_binding_2,Succ_CoA_lig
Model size528
Max annot lvl201174|Actinobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.31e-63
EggNOG OGsCOG0045@1|root,COG1042@1|root,COG0045@2|Bacteria,COG1042@2|Bacteria,2GKN1@201174|Actinobacteria,4CMW5@84992|Acidimicrobiia
DescriptionCoA binding domain
Cds size528
COG categoryCJ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186033.2625875-CDS-P-wetherbeei_contig14777:1150..16781683186033.2625875-CDS-P-wetherbeei_contig14777:1150..1678Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14777 1151..1678 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14777.3.1prot_P-wetherbeei_contig14777.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14777 1151..1678 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14777.3.1

>prot_P-wetherbeei_contig14777.3.1 ID=prot_P-wetherbeei_contig14777.3.1|Name=mRNA_P-wetherbeei_contig14777.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=176bp
MSTHESRHTLSESSSKQLLRDAGVPLAPEREVATAADAAAAAGELGFPVV
VKLCGAAIAHKTERGLVKLRLGDAGAVESASSELLGKATADDGDVSLLVA
PMISGNRELIAGLVRDPQFGANVMLGVGGVLAEAVADVVFRPVPVSDVDA
QEMIEGLATQKLLGEFRGEAAIDRVQ
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mRNA from alignment at P-wetherbeei_contig14777:1151..1678+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14777.3.1 ID=mRNA_P-wetherbeei_contig14777.3.1|Name=mRNA_P-wetherbeei_contig14777.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=528bp|location=Sequence derived from alignment at P-wetherbeei_contig14777:1151..1678+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGCACGCACGAGTCTCGCCACACACTGTCGGAGTCGTCGTCGAAGCA
GCTCCTGCGCGACGCGGGCGTGCCGTTGGCACCTGAGCGCGAGGTGGCCA
CGGCCGCAGACGCTGCCGCGGCGGCCGGTGAGCTCGGCTTCCCAGTGGTG
GTCAAGCTGTGCGGCGCCGCGATCGCGCACAAGACCGAGCGCGGCCTGGT
GAAGTTGCGACTCGGTGACGCAGGTGCGGTCGAGTCGGCCTCGAGCGAGC
TGCTCGGCAAGGCGACGGCTGACGATGGTGATGTCAGCCTGCTGGTCGCG
CCGATGATCAGCGGCAACCGCGAGCTGATCGCCGGGCTGGTGCGCGATCC
GCAGTTCGGTGCGAACGTGATGCTCGGCGTCGGTGGCGTGCTGGCCGAGG
CGGTGGCCGATGTCGTGTTCCGGCCGGTGCCGGTGAGCGACGTCGACGCG
CAGGAGATGATCGAGGGTCTGGCGACGCAGAAGCTGCTCGGCGAGTTCCG
CGGTGAGGCGGCGATCGATCGCGTCCAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14777:1151..1678+

>mRNA_P-wetherbeei_contig14777.3.1 ID=mRNA_P-wetherbeei_contig14777.3.1|Name=mRNA_P-wetherbeei_contig14777.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=528bp|location=Sequence derived from alignment at P-wetherbeei_contig14777:1151..1678+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGCACGCACGAGTCTCGCCACACACTGTCGGAGTCGTCGTCGAAGCA
GCTCCTGCGCGACGCGGGCGTGCCGTTGGCACCTGAGCGCGAGGTGGCCA
CGGCCGCAGACGCTGCCGCGGCGGCCGGTGAGCTCGGCTTCCCAGTGGTG
GTCAAGCTGTGCGGCGCCGCGATCGCGCACAAGACCGAGCGCGGCCTGGT
GAAGTTGCGACTCGGTGACGCAGGTGCGGTCGAGTCGGCCTCGAGCGAGC
TGCTCGGCAAGGCGACGGCTGACGATGGTGATGTCAGCCTGCTGGTCGCG
CCGATGATCAGCGGCAACCGCGAGCTGATCGCCGGGCTGGTGCGCGATCC
GCAGTTCGGTGCGAACGTGATGCTCGGCGTCGGTGGCGTGCTGGCCGAGG
CGGTGGCCGATGTCGTGTTCCGGCCGGTGCCGGTGAGCGACGTCGACGCG
CAGGAGATGATCGAGGGTCTGGCGACGCAGAAGCTGCTCGGCGAGTTCCG
CGGTGAGGCGGCGATCGATCGCGTCCAG
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