mRNA_P-wetherbeei_contig14750.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14750.1.1 vs. uniprot
Match: A0A850A730_9CHLR (3-isopropylmalate dehydratase small subunit n=1 Tax=Caldilineales bacterium TaxID=2306055 RepID=A0A850A730_9CHLR) HSP 1 Score: 252 bits (643), Expect = 1.310e-82 Identity = 126/191 (65.97%), Postives = 145/191 (75.92%), Query Frame = 1
Query: 1 MQAFTTLTATAAPLRAEDVDTDQIIPARYLTTVTREGLGDGLFAAWRGDPK------FVLNQACYRGAEILIAGNNFGSGSSREHAVWALADYGFRAVIAPGFADIFYNNSLKNGFLPITLAQEQVEAIFTHVESNPDAKIAIDLGAQIVTLPGHPPFAFTIDPFRKSCLLGGLDDLGYLLSLRGSIDKYE 555
M FTTLTA AAPLRAE+VDTDQIIPAR+LT VT+ G+GDGLFAAWR DP FVLNQ Y A+ILIAG NFGSGSSREHAVWAL +YGFRAVI+PGFADIFYNN+LKNG LP+ L +E V + VE PD +I +DLGAQ V+LP + F IDP+RK CL+ GLDDLGYLL+ +I YE
Sbjct: 1 MNPFTTLTAAAAPLRAENVDTDQIIPARFLTAVTKAGMGDGLFAAWRYDPTGQPRPDFVLNQPQYAAAQILIAGRNFGSGSSREHAVWALTEYGFRAVISPGFADIFYNNALKNGLLPVPLPEEAVRLLLDLVEEQPDVQIQLDLGAQTVSLPDGQSYHFAIDPYRKECLIEGLDDLGYLLAQEAAITAYE 191
BLAST of mRNA_P-wetherbeei_contig14750.1.1 vs. uniprot
Match: A0A7V2PI45_9CHLR (3-isopropylmalate dehydratase small subunit n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A7V2PI45_9CHLR) HSP 1 Score: 244 bits (624), Expect = 9.830e-80 Identity = 127/194 (65.46%), Postives = 143/194 (73.71%), Query Frame = 1
Query: 1 MQAFTTLTATAAPLRAEDVDTDQIIPARYLTTVTREGLGDGLFAAWRG------DPKFVLNQACYRGAEILIAGNNFGSGSSREHAVWALADYGFRAVIAPGFADIFYNNSLKNGFLPITLAQEQVEAIFTHVESNPDAKIAIDLGAQIVTLPGHPPFAFTIDPFRKSCLLGGLDDLGYLLSLRGSIDKYELRL 564
M FTTL ATA PLRAE+VDTDQIIPARYLT VT+ G+G+GLFAAWR +P FVLN+ Y GAEILIAG NFGSGSSREHAVWAL DYGFRAVI PGFADIFYNN+LKNG LPI L++ V + VE PD +I IDL AQ+V LP +F ID +RK CLL GLDDLGYLL+ +I YE L
Sbjct: 1 MNPFTTLIATAVPLRAENVDTDQIIPARYLTAVTKAGMGEGLFAAWRYGSTGELNPDFVLNRPQYAGAEILIAGRNFGSGSSREHAVWALTDYGFRAVITPGFADIFYNNALKNGLLPIPLSENIVNLLLDLVEEQPDTRILIDLPAQLVILPDGQQVSFDIDAYRKQCLLEGLDDLGYLLAQDAAITLYETSL 194
BLAST of mRNA_P-wetherbeei_contig14750.1.1 vs. uniprot
Match: A0A3A0BKP0_9CHLR (3-isopropylmalate dehydratase small subunit n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3A0BKP0_9CHLR) HSP 1 Score: 244 bits (623), Expect = 1.400e-79 Identity = 124/191 (64.92%), Postives = 142/191 (74.35%), Query Frame = 1
Query: 1 MQAFTTLTATAAPLRAEDVDTDQIIPARYLTTVTREGLGDGLFAAWR----GDPK--FVLNQACYRGAEILIAGNNFGSGSSREHAVWALADYGFRAVIAPGFADIFYNNSLKNGFLPITLAQEQVEAIFTHVESNPDAKIAIDLGAQIVTLPGHPPFAFTIDPFRKSCLLGGLDDLGYLLSLRGSIDKYE 555
MQ FT LTATA PLRAE+VDTDQIIPAR+LT VT+EG+GDGLF AWR G PK FVLNQ Y GA++L+AG NFGSGSSREHAVWAL +YGFRAVI PGFADIFYNNSLKNG LP+ L + V + VE P+ +I +DL Q+V LP F IDPFRK CLL G+DDLGYLLS +I +E
Sbjct: 1 MQPFTRLTATAVPLRAENVDTDQIIPARFLTAVTKEGMGDGLFYAWRYHRDGTPKPDFVLNQPQYAGAQVLLAGRNFGSGSSREHAVWALTEYGFRAVITPGFADIFYNNSLKNGLLPVALPEATVNMLLDLVEEEPETEITVDLENQVVVLPDGQQLPFEIDPFRKMCLLNGVDDLGYLLSKNDAIAAHE 191
BLAST of mRNA_P-wetherbeei_contig14750.1.1 vs. uniprot
Match: A0A7V3LX22_9CHLR (3-isopropylmalate dehydratase small subunit n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7V3LX22_9CHLR) HSP 1 Score: 243 bits (621), Expect = 2.810e-79 Identity = 128/191 (67.02%), Postives = 142/191 (74.35%), Query Frame = 1
Query: 1 MQAFTTLTATAAPLRAEDVDTDQIIPARYLTTVTREGLGDGLFAAWR------GDPKFVLNQACYRGAEILIAGNNFGSGSSREHAVWALADYGFRAVIAPGFADIFYNNSLKNGFLPITLAQEQVEAIFTHVESNPDAKIAIDLGAQIVTLPGHPPFAFTIDPFRKSCLLGGLDDLGYLLSLRGSIDKYE 555
M FTTL ATA PLRAE+VDTDQIIPARYLT VT+ G+G GLFAAWR +P FVLNQ Y A+ILI+G NFGSGSSREHAVWAL DYGFRAVIAP FADIFYNN+LKNG LPI L + V + VE +P A+IAIDL AQ VTLP F F IDP+RK CLL GLDDLGYLL+ +I YE
Sbjct: 1 MNPFTTLDATAVPLRAENVDTDQIIPARYLTAVTKAGMGAGLFAAWRYLPDGSPNPDFVLNQPQYADAQILISGKNFGSGSSREHAVWALTDYGFRAVIAPSFADIFYNNALKNGSLPIPLPEAAVAMLMDLVEEDPGARIAIDLPAQTVTLPDGQQFHFDIDPYRKQCLLQGLDDLGYLLANLNAIRAYE 191
BLAST of mRNA_P-wetherbeei_contig14750.1.1 vs. uniprot
Match: A0A540VF34_9CHLR (3-isopropylmalate dehydratase small subunit n=1 Tax=Litorilinea aerophila TaxID=1204385 RepID=A0A540VF34_9CHLR) HSP 1 Score: 243 bits (619), Expect = 5.660e-79 Identity = 125/193 (64.77%), Postives = 142/193 (73.58%), Query Frame = 1
Query: 1 MQAFTTLTATAAPLRAEDVDTDQIIPARYLTTVTREGLGDGLFAAWR----GDPK--FVLNQACYRGAEILIAGNNFGSGSSREHAVWALADYGFRAVIAPGFADIFYNNSLKNGFLPITLAQEQVEAIFTHVESNPDAKIAIDLGAQIVTLPGHPPFAFTIDPFRKSCLLGGLDDLGYLLSLRGSIDKYELR 561
M+ FTTL TA PLRAE+VDTDQIIPAR+LT VT+EG+GDGLF +WR G PK FVLN+ YRGA+ILIAG NFGSGSSREHAVWAL DYGFR VI PGFADIFYNNSLKNG LP+TL +E V + E P +I +DL Q V LP F IDPFRK CLL G+DDLGYLLS +I+ +E R
Sbjct: 1 MEPFTTLKTTAVPLRAENVDTDQIIPARFLTAVTKEGMGDGLFYSWRYHPDGTPKADFVLNKPEYRGAQILIAGRNFGSGSSREHAVWALTDYGFRCVITPGFADIFYNNSLKNGLLPVTLPEETVNMLLDLTEEEPQTQITVDLENQQVILPDGQALPFQIDPFRKMCLLQGVDDLGYLLSKMEAIEAHEAR 193
BLAST of mRNA_P-wetherbeei_contig14750.1.1 vs. uniprot
Match: A0A3A0AU43_9CHLR (3-isopropylmalate dehydratase small subunit n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3A0AU43_9CHLR) HSP 1 Score: 241 bits (615), Expect = 2.380e-78 Identity = 123/191 (64.40%), Postives = 141/191 (73.82%), Query Frame = 1
Query: 1 MQAFTTLTATAAPLRAEDVDTDQIIPARYLTTVTREGLGDGLFAAWR----GDPK--FVLNQACYRGAEILIAGNNFGSGSSREHAVWALADYGFRAVIAPGFADIFYNNSLKNGFLPITLAQEQVEAIFTHVESNPDAKIAIDLGAQIVTLPGHPPFAFTIDPFRKSCLLGGLDDLGYLLSLRGSIDKYE 555
M+ F LTATA PLRAE+VDTDQIIPAR+LT VT+EG+GDGLFA+WR G PK FVLNQ Y+GA++LIAG NFGSGSSREHAVWAL +YGF+AVI PGF DIFYNNSLKNG LPI L E V + VE P+ +I +DL Q VTLP F IDPFRK CLL G+DDLGY+LS I +E
Sbjct: 2 MEPFQKLTATAVPLRAENVDTDQIIPARFLTAVTKEGMGDGLFASWRYNADGSPKPDFVLNQPEYQGAQVLIAGRNFGSGSSREHAVWALTEYGFKAVITPGFGDIFYNNSLKNGLLPIALPTEAVNLLLDLVEEEPETQITVDLANQTVTLPDGQQHGFEIDPFRKLCLLEGVDDLGYILSKEEKIAAFE 192
BLAST of mRNA_P-wetherbeei_contig14750.1.1 vs. uniprot
Match: A0A7C6ZS06_9CHLR (3-isopropylmalate dehydratase small subunit n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C6ZS06_9CHLR) HSP 1 Score: 236 bits (602), Expect = 2.180e-76 Identity = 123/193 (63.73%), Postives = 144/193 (74.61%), Query Frame = 1
Query: 1 MQAFTTLTATAAPLRAEDVDTDQIIPARYLTTVTREGLGDGLFAAWR----GDPK--FVLNQACYRGAEILIAGNNFGSGSSREHAVWALADYGFRAVIAPGFADIFYNNSLKNGFLPITLAQEQVEAIFTHVESNPDAKIAIDLGAQIVTLPGHPPFAFTIDPFRKSCLLGGLDDLGYLLSLRGSIDKYELR 561
MQ FTTL+ATA PLR E+VDTDQIIPA+YLT VT+EG+G GLF+ R G PK FVLN+ Y+GAEILIAG NFGSGSSREHAVWAL DYGFR VI+PGFADIFYNNSLKNG LP+TL +E V ++ VE +P+ I +DL +Q VTLP F ID FRK CLL G+DDLGY+ S +I YE +
Sbjct: 1 MQPFTTLSATAVPLRMENVDTDQIIPAKYLTAVTKEGMGKGLFSWIRYNPDGTPKADFVLNRPEYQGAEILIAGRNFGSGSSREHAVWALTDYGFRCVISPGFADIFYNNSLKNGLLPVTLPEEVVNMLWDLVEEDPETMIYVDLKSQTVTLPDGQQHTFAIDAFRKLCLLEGVDDLGYIASKEAAIAAYEAK 193
BLAST of mRNA_P-wetherbeei_contig14750.1.1 vs. uniprot
Match: A0A7Z9XL30_9CHLR (3-isopropylmalate dehydratase small subunit n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A7Z9XL30_9CHLR) HSP 1 Score: 234 bits (596), Expect = 1.780e-75 Identity = 118/191 (61.78%), Postives = 141/191 (73.82%), Query Frame = 1
Query: 1 MQAFTTLTATAAPLRAEDVDTDQIIPARYLTTVTREGLGDGLFAAWR------GDPKFVLNQACYRGAEILIAGNNFGSGSSREHAVWALADYGFRAVIAPGFADIFYNNSLKNGFLPITLAQEQVEAIFTHVESNPDAKIAIDLGAQIVTLPGHPPFAFTIDPFRKSCLLGGLDDLGYLLSLRGSIDKYE 555
M FT L ATAAPLRAE+VDTDQIIPAR+LT VT+ G+G GLFAAWR +P F LN+ Y GA+IL++G NFGSGSSREHAVWAL D+GFRAVIAP FADIF+NN+LKNG LP+TL ++ V + V+ +P +I IDL AQ VTLP F IDP+RK CL+ GLDDLGYLL+ +I YE
Sbjct: 1 MNPFTILNATAAPLRAENVDTDQIIPARFLTAVTKTGMGQGLFAAWRYLPDGSPNPDFALNRPEYAGAQILLSGKNFGSGSSREHAVWALTDFGFRAVIAPSFADIFHNNALKNGLLPVTLPEDVVSMLMDLVDEDPATRIRIDLPAQTVTLPDGQQLIFDIDPYRKQCLIQGLDDLGYLLANLDAIQAYE 191
BLAST of mRNA_P-wetherbeei_contig14750.1.1 vs. uniprot
Match: A0A6N8W902_9CHLR (3-isopropylmalate dehydratase small subunit n=5 Tax=unclassified Caldilineaceae TaxID=1919254 RepID=A0A6N8W902_9CHLR) HSP 1 Score: 233 bits (594), Expect = 4.820e-75 Identity = 122/200 (61.00%), Postives = 139/200 (69.50%), Query Frame = 1
Query: 1 MQAFTTLTATAAPLRAEDVDTDQIIPARYLTTVTREGLGDGLFAAWR------GDPKFVLNQACYRGAEILIAGNNFGSGSSREHAVWALADYGFRAVIAPGFADIFYNNSLKNGFLPITLAQEQVEAIFTHVESNPDAKIAIDLGAQIVTLP---------GHPPFAFTIDPFRKSCLLGGLDDLGYLLSLRGSIDKYE 555
MQ FTTLT+ A PLR E+VDTDQIIPARYLT VT+EG+GDGLF+ WR +P FVLNQ Y+G+EIL+AG NFG GSSREHAVWAL YGFR VI+P FADIFYNNSLKNG LP+ L +E V + VE P I IDL +Q VTLP P++F IDPFRK CLL GLDDLGYLL I +E
Sbjct: 1 MQPFTTLTSNALPLRTENVDTDQIIPARYLTAVTQEGMGDGLFSWWRYARDGSPNPDFVLNQPQYQGSEILVAGRNFGIGSSREHAVWALTQYGFRTVISPAFADIFYNNSLKNGLLPVRLPEETVGRLLDLVEEVPHTSICIDLPSQTVTLPDIDSSTAGDSEGPWSFDIDPFRKQCLLRGLDDLGYLLDKEEQISAFE 200
BLAST of mRNA_P-wetherbeei_contig14750.1.1 vs. uniprot
Match: A0A7C3B8G4_9CHLR (3-isopropylmalate dehydratase small subunit n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A7C3B8G4_9CHLR) HSP 1 Score: 229 bits (584), Expect = 1.190e-73 Identity = 123/191 (64.40%), Postives = 135/191 (70.68%), Query Frame = 1
Query: 1 MQAFTTLTATAAPLRAEDVDTDQIIPARYLTTVTREGLGDGLFAAWRGDPK------FVLNQACYRGAEILIAGNNFGSGSSREHAVWALADYGFRAVIAPGFADIFYNNSLKNGFLPITLAQEQVEAIFTHVESNPDAKIAIDLGAQIVTLPGHPPFAFTIDPFRKSCLLGGLDDLGYLLSLRGSIDKYE 555
M+ F T TA PLRAE+VDTDQIIPARYLTTVTREGLG+GLFA WR +P F LNQ Y+GA ILIAG NFG GSSREHA WA+ D GFR VIAP FADIFYNNSLKNG L +TL QEQVE + VE P I +DL Q V+LP F F ID +RK CLL GLDDLGYLLS +I YE
Sbjct: 1 MEPFIVHTGTAVPLRAENVDTDQIIPARYLTTVTREGLGEGLFADWRRNPDGSLREDFPLNQPRYQGATILIAGPNFGCGSSREHAPWAILDAGFRVVIAPRFADIFYNNSLKNGLLLVTLDQEQVEMLMNLVEEEPSTPITVDLERQEVSLPDGQRFHFEIDGYRKRCLLQGLDDLGYLLSKEEAIAAYE 191 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14750.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14750.1.1 >prot_P-wetherbeei_contig14750.1.1 ID=prot_P-wetherbeei_contig14750.1.1|Name=mRNA_P-wetherbeei_contig14750.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=193bp MQAFTTLTATAAPLRAEDVDTDQIIPARYLTTVTREGLGDGLFAAWRGDPback to top mRNA from alignment at P-wetherbeei_contig14750:199..777+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14750.1.1 ID=mRNA_P-wetherbeei_contig14750.1.1|Name=mRNA_P-wetherbeei_contig14750.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=579bp|location=Sequence derived from alignment at P-wetherbeei_contig14750:199..777+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14750:199..777+ >mRNA_P-wetherbeei_contig14750.1.1 ID=mRNA_P-wetherbeei_contig14750.1.1|Name=mRNA_P-wetherbeei_contig14750.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=579bp|location=Sequence derived from alignment at P-wetherbeei_contig14750:199..777+ (Phaeothamnion wetherbeei SAG_119_79)back to top |