prot_P-wetherbeei_contig1475.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1475.2.1
Unique Nameprot_P-wetherbeei_contig1475.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length63
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig1475.2.1 vs. uniprot
Match: A0A6H5JG03_9PHAE (BHLH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG03_9PHAE)

HSP 1 Score: 50.4 bits (119), Expect = 1.310e-5
Identity = 24/38 (63.16%), Postives = 30/38 (78.95%), Query Frame = 0 
Query:   13 HVLRRAVVKNTIYELSLSLTLAQDALGRPKFFHACLVP 50
            HVL +AV+KN   +LSLSLTL +DALGRPK+F   L+P
Sbjct:  358 HVLSKAVLKNKDQDLSLSLTLVRDALGRPKYFLCSLLP 395
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1475.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JG03_9PHAE1.310e-563.16BHLH domain-containing protein n=1 Tax=Ectocarpus ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1475contigP-wetherbeei_contig1475:3469..4060 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1475.2.1mRNA_P-wetherbeei_contig1475.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1475 3244..4393 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1475.2.1 ID=prot_P-wetherbeei_contig1475.2.1|Name=mRNA_P-wetherbeei_contig1475.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=63bp
MVSETPPDTEGGHVLRRAVVKNTIYELSLSLTLAQDALGRPKFFHACLVP
AEENVIETATSV*
back to top