mRNA_P-wetherbeei_contig14743.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14743.2.1 vs. uniprot
Match: A0A6M8WN69_9PROT (GGDEF domain-containing protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A6M8WN69_9PROT) HSP 1 Score: 207 bits (528), Expect = 1.480e-62 Identity = 114/251 (45.42%), Postives = 162/251 (64.54%), Query Frame = 1
Query: 49 LRISNALQSSLYVRDVIRGFAREVRRMVRGVSVRYRNSVQKVSIDDGTRELNTYTYELNLVGRYLGEITFSRAGVLVESELQVLEVLLCTLIYPLRNSLQYERALKIALKDPLTGVNNRAMLSAQLKHHISLAQRQLSPLSLLIIDIDHFKSVNDRFGHIVGDVVLTQIANQIVKCTRTSDGVYRYGGEEFVVILPSTGTAGAELLAERIRSGIEAMQVDSLPPAEHVTASIGVAHFVNGESHGELMQRAD 801
L I++ALQ++L + +I FAREVR ++ +RYR+ K+ + NT +Y+L + +LGEI F R EL LE LLC+L+YPLRN+LQY+R ++ A DPLTG+ NR L ++L+ H+ LA R SPLS++++D+D FKS+ND +GH GD VL +A ++ +C RTSD V+R+GGEEFV+ILP+T GA LLAER+R +E V +VT S+GVA E +L +RAD
Sbjct: 35 LEITSALQTTLDPQKLIEVFAREVRTTLQFSGLRYRHEPMKLLLQVDQLATNTCSYKLTIENEFLGEIIFGRRRRFSPDELASLEHLLCSLLYPLRNALQYQRMVQCARLDPLTGLQNRVSLDSELERHVQLAHRHNSPLSMVVLDMDRFKSINDTYGHAFGDQVLRVLAERVSECMRTSDRVFRFGGEEFVLILPNTDLDGAYLLAERVRETLEGTPVMHGDEQVNVTLSLGVATLNPRELGDQLFERAD 285
BLAST of mRNA_P-wetherbeei_contig14743.2.1 vs. uniprot
Match: A0A2N6D0B3_9GAMM (GGDEF domain-containing protein n=2 Tax=Sedimenticola selenatireducens TaxID=191960 RepID=A0A2N6D0B3_9GAMM) HSP 1 Score: 199 bits (507), Expect = 2.320e-59 Identity = 108/251 (43.03%), Postives = 158/251 (62.95%), Query Frame = 1
Query: 49 LRISNALQSSLYVRDVIRGFAREVRRMVRGVSVRYRNSVQKVSIDDGTRELNTYTYELNLVGRYLGEITFSRAGVLVESELQVLEVLLCTLIYPLRNSLQYERALKIALKDPLTGVNNRAMLSAQLKHHISLAQRQLSPLSLLIIDIDHFKSVNDRFGHIVGDVVLTQIANQIVKCTRTSDGVYRYGGEEFVVILPSTGTAGAELLAERIRSGIEAMQVDSLPPAEHVTASIGVAHFVNGESHGELMQRAD 801
L +S LQS+L + +++ FA+E+R+ ++ + Y K+ I G + N YEL + G +LG++ F R+ SEL+++E LL L+YPLRN+L Y+RA++ A DPLTGV NRA + + +K I LA R +PLS++++DIDHFKS+NDR GH+ GD L +A + R SD ++RYGGEEF+++L T +GAELLAERIR IE M + A +T S+GV + G+ L QR D
Sbjct: 37 LALSGVLQSTLEINELLALFAKEIRQFIKYDGLTYNFPSLKIDIKLGDQPANNCAYELVVAGDHLGDLNFFRSYPFETSELEMIENLLAGLLYPLRNTLLYQRAVESATIDPLTGVRNRAAMDSAMKREIGLALRHKTPLSVILMDIDHFKSINDRHGHMYGDQALKAVAQCAEQSVRESDMIFRYGGEEFLILLTGTDLSGAELLAERIRQNIETMSPQT-DKAIQMTVSLGVTTLIQGDDINSLFQRMD 286
BLAST of mRNA_P-wetherbeei_contig14743.2.1 vs. uniprot
Match: A0A3B0ZE64_9ZZZZ (Diguanylate cyclase (GGDEF domain) n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0ZE64_9ZZZZ) HSP 1 Score: 199 bits (505), Expect = 5.190e-59 Identity = 111/251 (44.22%), Postives = 154/251 (61.35%), Query Frame = 1
Query: 49 LRISNALQSSLYVRDVIRGFAREVRRMVRGVSVRYRNSVQKVSIDDGTRELNTYTYELNLVGRYLGEITFSRAGVLVESELQVLEVLLCTLIYPLRNSLQYERALKIALKDPLTGVNNRAMLSAQLKHHISLAQRQLSPLSLLIIDIDHFKSVNDRFGHIVGDVVLTQIANQIVKCTRTSDGVYRYGGEEFVVILPSTGTAGAELLAERIRSGIEAMQVDSLPPAEHVTASIGVAHFVNGESHGELMQRAD 801
LRI++ LQ++L ++ +I F E R V +++ Q++S D G+ N+ TY L + + LGEITF R +E + LE LLC L+YPLRNSL YE AL+ ALKDPLTG+NNRA + A L + LA+R +PLSL+ +D+DHFK VND GH GD VL Q+ N ++ R SD V+R+GGEEFVV+L +T GA LA+RIR +E ++ +TAS+G A +S L + D
Sbjct: 42 LRITSVLQTTLDIKKIIEIFIFEASRWVPIDGAKFKYEEQQLSFDIGSEYKNSLTYHLTIPKQSLGEITFMRRKRFTAAENKTLEYLLCGLVYPLRNSLAYESALQAALKDPLTGINNRAAMDASLIREVDLARRHETPLSLIALDLDHFKKVNDTLGHDAGDQVLRQVVNTLLDTIRVSDMVFRFGGEEFVVLLTNTNKKGAMQLAQRIRKQVEINAIELDEKKLFITASLGTACLSVNDSEKSLFLKTD 292
BLAST of mRNA_P-wetherbeei_contig14743.2.1 vs. uniprot
Match: A0A7C5NLA1_9GAMM (GGDEF domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C5NLA1_9GAMM) HSP 1 Score: 197 bits (500), Expect = 2.920e-58 Identity = 106/267 (39.70%), Postives = 176/267 (65.92%), Query Frame = 1
Query: 1 TADQHRGKDIVSDATKLRISNALQSSLYVRDVIRGFAREVRRMVRGVSVRYRNSVQKVSIDDGTRELNTYTYELNLVGRYLGEITFSRAGVLVESELQVLEVLLCTLIYPLRNSLQYERALKIALKDPLTGVNNRAMLSAQLKHHISLAQRQLSPLSLLIIDIDHFKSVNDRFGHIVGDVVLTQIANQIVKCTRTSDGVYRYGGEEFVVILPSTGTAGAELLAERIRSGIEAMQVDSLPPAEHVTASIGVAHFVNGESHGELMQRAD 801
T + GKD ++ A L++++ALQ++L + +I F+ E+R ++ S+ + N Q + ++ GT+ ++ +Y+L + + LG+++ +R E E +LE L+C+L+YPLRN++ Y+ AL AL DPLTG NNR+ +++ L I LA+R +PLSL+++DID FKS+ND +GH+ GD V+ +A+ I++C+R+SD ++R GGEEFV++L +T GA +LAERIR I + + VTAS+GVA F ++ L ++AD
Sbjct: 26 TIESEAGKDGLNKA--LQLASALQTTLEIDKLIEVFSTEIRELIPHDSIAFENRQQNILVELGTKARHSCSYQLVVTAQTLGQLSLTRHRKFSEQETLLLESLICSLVYPLRNAIMYKHALTAALTDPLTGANNRSAMNSALIREIELARRHGTPLSLIMLDIDKFKSINDTYGHLAGDFVIKSVADAIMECSRSSDILFRSGGEEFVILLSNTAKEGALMLAERIRLAIASNRYLYGDHEIAVTASLGVACFSPEDNSETLFEKAD 290
BLAST of mRNA_P-wetherbeei_contig14743.2.1 vs. uniprot
Match: A0A5J6QD21_9PSED (GGDEF domain-containing protein n=1 Tax=Pseudomonas sp. C27(2019) TaxID=2604941 RepID=A0A5J6QD21_9PSED) HSP 1 Score: 196 bits (499), Expect = 3.790e-58 Identity = 107/249 (42.97%), Postives = 159/249 (63.86%), Query Frame = 1
Query: 55 ISNALQSSLYVRDVIRGFAREVRRMVRGVSVRYRNSVQKVSIDDGTRELNTYTYELNLVGRYLGEITFSRAGVLVESELQVLEVLLCTLIYPLRNSLQYERALKIALKDPLTGVNNRAMLSAQLKHHISLAQRQLSPLSLLIIDIDHFKSVNDRFGHIVGDVVLTQIANQIVKCTRTSDGVYRYGGEEFVVILPSTGTAGAELLAERIRSGIEAMQVDSLPPAEHVTASIGVAHFVNGESHGELMQRAD 801
+S LQSSL ++D++ F + +R++ S+ Y+++ V+ + GT + ++ TY LN G YLG+I+F+R + VE EL E ++ +LI+PLRNSL Y AL+ ALKD LTG+ NR + L+ I AQR LS+L+IDID FKS+ND +GH GD VL +A I RT+D V+R+GGEEF+ +LP+T + A L+AER+R +E Q++ VTASIG A + ++ L+QR+D
Sbjct: 41 LSTQLQSSLDIKDILAMFFKTTQRLISYDSLVYKHAGHAVAAELGTSKKHSVTYNLNYQGEYLGDISFTRENIFVEDELGDFESIIASLIFPLRNSLLYTAALQSALKDSLTGIGNRIAMQQTLQRDIYTAQRHEQALSVLMIDIDFFKSINDTYGHSAGDAVLEHVAQHIQTQLRTADAVFRFGGEEFLAVLPNTCSQHANLVAERLRESLENFQINHEEHVITVTASIGCATLRSEDTQQTLLQRSD 289
BLAST of mRNA_P-wetherbeei_contig14743.2.1 vs. uniprot
Match: A0A257SVY5_9GAMM (GGDEF domain-containing protein n=1 Tax=Chromatiales bacterium 21-64-14 TaxID=1970504 RepID=A0A257SVY5_9GAMM) HSP 1 Score: 196 bits (499), Expect = 4.620e-58 Identity = 120/269 (44.61%), Postives = 159/269 (59.11%), Query Frame = 1
Query: 1 TADQHRG-KDIVSDATK-LRISNALQSSLYVRDVIRGFAREVRRMVRGVSVRYRNSVQKVSIDDGTRELNTYTYELNLVGRYLGEITFSRAGVLVESELQVLEVLLCTLIYPLRNSLQYERALKIALKDPLTGVNNRAMLSAQLKHHISLAQRQLSPLSLLIIDIDHFKSVNDRFGHIVGDVVLTQIANQIVKCTRTSDGVYRYGGEEFVVILPSTGTAGAELLAERIRSGIEAMQVDSLPPAEHVTASIGVAHFVNGESHGELMQRAD 801
TA HRG +D + LR + ALQ++L V ++ F E+R V + YRN+ Q V G ++ TY L + LGE+ F R+ +E LE LL L++PLRN+L Y AL A KDPLTGVNNR L A LK I LA R +PLSLL++DIDHFKSVNDR+GH +GD L IA C R SD ++RYGGEEFV+++ +T GA +LAERIR+ +EAM+ ++T S+GV+ G+ L RAD
Sbjct: 24 TARHHRGPRDTQQRLVETLRTTRALQTTLEVEKLVEIFCEEIRERVPHDAAIYRNATQNVLFKLGEEARHSCTYRLAMGAHSLGELGFMRSTRFSAAETARLEELLALLLHPLRNALSYRYALWSASKDPLTGVNNRGALDAALKREIGLAHRHGTPLSLLLMDIDHFKSVNDRYGHTLGDCALRHIAECAASCIRGSDMLFRYGGEEFVILVSNTEWFGALMLAERIRTAVEAMECTCNDVRLNMTVSLGVSTLEPGDEPTTLFGRAD 292
BLAST of mRNA_P-wetherbeei_contig14743.2.1 vs. uniprot
Match: A0A4R1HCR4_9GAMM (Diguanylate cyclase (GGDEF)-like protein n=1 Tax=Thiogranum longum TaxID=1537524 RepID=A0A4R1HCR4_9GAMM) HSP 1 Score: 196 bits (498), Expect = 4.780e-58 Identity = 110/251 (43.82%), Postives = 152/251 (60.56%), Query Frame = 1
Query: 49 LRISNALQSSLYVRDVIRGFAREVRRMVRGVSVRYRNSVQKVSIDDGTRELNTYTYELNLVGRYLGEITFSRAGVLVESELQVLEVLLCTLIYPLRNSLQYERALKIALKDPLTGVNNRAMLSAQLKHHISLAQRQLSPLSLLIIDIDHFKSVNDRFGHIVGDVVLTQIANQIVKCTRTSDGVYRYGGEEFVVILPSTGTAGAELLAERIRSGIEAMQVDSLPPAEHVTASIGVAHFVNGESHGELMQRAD 801
L I+ +LQ++L +I F+ EV ++ VRY N + + G + + +Y LN+ LG +TF R ++E + LE LLC+L+YPLRN L YE A+++A KDPLTG+ NRA L LK +S AQR+ + LSLL++DIDHFK++NDR+GHI GD L +AN + C R D ++RYGGEEFVV++ T AGA LLAERIR I D +TASIGV+ + + RAD
Sbjct: 33 LEITQSLQTTLDPTRLIEIFSAEVGSLIVHHGVRYHNEDTGIDLKLGRQARHACSYNLNIGDEPLGSLTFRRNQKFSDAEFEALEQLLCSLLYPLRNGLLYEDAIQLAQKDPLTGICNRAALDEMLKRELSHAQRKDTSLSLLVLDIDHFKNINDRYGHITGDCALKCVANMVDACKRDGDLLFRYGGEEFVVLMRDTDLAGAHLLAERIRQYIAENSFDCSGATLSITASIGVSELKQNDDPTAMFTRAD 283
BLAST of mRNA_P-wetherbeei_contig14743.2.1 vs. uniprot
Match: A0A3B0Y0W8_9ZZZZ (Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0Y0W8_9ZZZZ) HSP 1 Score: 196 bits (498), Expect = 4.920e-58 Identity = 111/251 (44.22%), Postives = 157/251 (62.55%), Query Frame = 1
Query: 49 LRISNALQSSLYVRDVIRGFAREVRRMVRGVSVRYRNSVQKVSIDDGTRELNTYTYELNLVGRYLGEITFSRAGVLVESELQVLEVLLCTLIYPLRNSLQYERALKIALKDPLTGVNNRAMLSAQLKHHISLAQRQLSPLSLLIIDIDHFKSVNDRFGHIVGDVVLTQIANQIVKCTRTSDGVYRYGGEEFVVILPSTGTAGAELLAERIRSGIEAMQVDSLPPAEHVTASIGVAHFVNGESHGELMQRAD 801
L I+ +LQ++L +I F+ EV ++ VRYRN ++ + G + + TY LN+ LG+++F R ++E++ LE LLC+L+YPLRN L YE AL++A KDPLTG+ NRA L L+ +S A R+ + LS+L++DIDHFK+VNDR+GHIVGD L IA+ + C R D ++RYGGEEFVV++ T AGA LLAERIR I + +VT SIGV+ +S + RAD
Sbjct: 33 LEITQSLQTTLDPTRLIEIFSAEVGALIVHQGVRYRNDDVEIDLKLGRQARHACTYHLNIGDEPLGKLSFRRNQKFTDAEIEALEQLLCSLLYPLRNGLLYEDALQLAQKDPLTGICNRAALDEMLQRELSHALRKDADLSMLVLDIDHFKNVNDRYGHIVGDCALKAIAHMVDTCKRDGDLLFRYGGEEFVVLMRDTDLAGAHLLAERIRKYIAKTSYNCSGADLNVTVSIGVSELQQHDSPVTIFSRAD 283
BLAST of mRNA_P-wetherbeei_contig14743.2.1 vs. uniprot
Match: A0A3B9WZM0_9GAMM (GGDEF domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3B9WZM0_9GAMM) HSP 1 Score: 196 bits (498), Expect = 5.060e-58 Identity = 111/252 (44.05%), Postives = 153/252 (60.71%), Query Frame = 1
Query: 46 KLRISNALQSSLYVRDVIRGFAREVRRMVRGVSVRYRNSVQKVSIDDGTRELNTYTYELNLVGRYLGEITFSRAGVLVESELQVLEVLLCTLIYPLRNSLQYERALKIALKDPLTGVNNRAMLSAQLKHHISLAQRQLSPLSLLIIDIDHFKSVNDRFGHIVGDVVLTQIANQIVKCTRTSDGVYRYGGEEFVVILPSTGTAGAELLAERIRSGIEAMQVDSLPPAEHVTASIGVAHFVNGESHGELMQRAD 801
K R+S+ LQSSL + V++ F E+R + + + Y++ +V ++ G + ++ Y + +LGEITF R ESEL+ LE +L TLI P+RNSLQY +AL +L DPLTG NR L L + LA+R SPLSLL+ID+D FK++ND FGH GDV L +IA Q+ R +D +RYGGEEFVV+L T +GA ++ ERIR+ IEA Q +T SIG A ++ L QRAD
Sbjct: 37 KFRLSSVLQSSLDMEQVLKIFFEELRPLAQFAGLVYQHETHQVEVNVGKKATHSCGYRITTAQDHLGEITFYRGKRFKESELEFLEDILSTLICPIRNSLQYRQALIASLTDPLTGSGNRLSLDNTLLREMELAKRHRSPLSLLVIDVDDFKNINDEFGHKTGDVALQRIAQQLTIVNRLTDLSFRYGGEEFVVLLNKTSLSGATVIGERIRAAIEATQFKDANKIFKITVSIGAASLKPNDNKDRLFQRAD 288
BLAST of mRNA_P-wetherbeei_contig14743.2.1 vs. uniprot
Match: A0A3A4VZD7_9GAMM (GGDEF domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3A4VZD7_9GAMM) HSP 1 Score: 194 bits (494), Expect = 2.020e-57 Identity = 108/250 (43.20%), Postives = 152/250 (60.80%), Query Frame = 1
Query: 52 RISNALQSSLYVRDVIRGFAREVRRMVRGVSVRYRNSVQKVSIDDGTRELNTYTYELNLVGRYLGEITFSRAGVLVESELQVLEVLLCTLIYPLRNSLQYERALKIALKDPLTGVNNRAMLSAQLKHHISLAQRQLSPLSLLIIDIDHFKSVNDRFGHIVGDVVLTQIANQIVKCTRTSDGVYRYGGEEFVVILPSTGTAGAELLAERIRSGIEAMQVDSLPPAEHVTASIGVAHFVNGESHGELMQRAD 801
RI+ LQ++L VI FA E R V +V Y +S + + + G + +Y L L G LG++TF+R SE LE LLC+L+YPLRN+L+Y A++ A PLTGVNNRA +S I +A+R PLSL+I+DIDHFK +ND++GH GD V+ Q+A+ ++ C R +D ++RYGGEEF V+L +T GA LLAERIR +E +T S+GVA +G++ L +RAD
Sbjct: 38 RITAVLQTTLDAPRVIEMFAEEARASVPFDAVAYEHSARDIILSLGQTARHACSYRLMLAGEELGQLTFTRRRRFSASETLQLEDLLCSLVYPLRNALRYHEAVRAAFMCPLTGVNNRATMSVTFNREIEMARRHAMPLSLIILDIDHFKLINDKYGHAAGDSVIKQLAHTVMACIRNTDMLFRYGGEEFTVLLSNTAPGGAVLLAERIRRTVEKTACIYNGITIPLTVSLGVAFLKDGDTEATLFERAD 287 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14743.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14743.2.1 >prot_P-wetherbeei_contig14743.2.1 ID=prot_P-wetherbeei_contig14743.2.1|Name=mRNA_P-wetherbeei_contig14743.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=267bp TADQHRGKDIVSDATKLRISNALQSSLYVRDVIRGFAREVRRMVRGVSVRback to top mRNA from alignment at P-wetherbeei_contig14743:882..1682+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14743.2.1 ID=mRNA_P-wetherbeei_contig14743.2.1|Name=mRNA_P-wetherbeei_contig14743.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=801bp|location=Sequence derived from alignment at P-wetherbeei_contig14743:882..1682+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14743:882..1682+ >mRNA_P-wetherbeei_contig14743.2.1 ID=mRNA_P-wetherbeei_contig14743.2.1|Name=mRNA_P-wetherbeei_contig14743.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=801bp|location=Sequence derived from alignment at P-wetherbeei_contig14743:882..1682+ (Phaeothamnion wetherbeei SAG_119_79)back to top |