mRNA_P-wetherbeei_contig14742.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14742.1.1 vs. uniprot
Match: A0A6H5L6F8_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6F8_9PHAE) HSP 1 Score: 134 bits (337), Expect = 3.160e-34 Identity = 70/125 (56.00%), Postives = 87/125 (69.60%), Query Frame = 1
Query: 7 SIMYRIMPAIWAQAAVIYALFHVYAYIGILAFAGIES-NADFGDAEMAYQPYYYLINFNSYGRAMVTLFCLLVVNNWYIIAAGYAEFSPLGRWCYLYFLSFQIVGVMVALNVLTAIFINAFNAKA 378
S+MY I P+++AQA VI+ +FH+Y Y+G+ + G+ + ADFGD A PYYY NFNSY +VTLF LLVVNNW +I GY SPLG W YLYFLSF + V +ALNVLTAIF+ AF A
Sbjct: 74 SVMYMITPSVFAQAGVIFTVFHLYCYLGMALYGGVVTPGADFGDTPFANSPYYYENNFNSYPEGLVTLFELLVVNNWNMIITGYVHASPLGSWTYLYFLSFITLAVTLALNVLTAIFMTAFTTAA 198
BLAST of mRNA_P-wetherbeei_contig14742.1.1 vs. uniprot
Match: A0A7S2WC31_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WC31_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 9.080e-21 Identity = 53/119 (44.54%), Postives = 79/119 (66.39%), Query Frame = 1
Query: 19 RIMPAIWAQAAVIYALFHVYAYIGILAFAGIESNADFGDAEMAYQPYYYLINFNSYGRAMVTLFCLLVVNNWYIIAAGYAEFSPLGR-WCYLYFLSFQIVGVMVALNVLTAIFINAFNA 372
R++P++ AAVI+A+ HVYA+IG++ F G N D + P+Y +NFNSYG A+VTLF +L+ NNW+++A GYA + + Y+YF+SFQI+ V ++V+TA FI A A
Sbjct: 209 RVLPSLRGHAAVIFAVMHVYAWIGMVRFGG-RINDQLPDPWLQQDPFYRDLNFNSYGGALVTLFVILIGNNWHVVAGGYANIPGETQVFVYVYFISFQILVCTVGVSVVTAFFIEAVQA 326
BLAST of mRNA_P-wetherbeei_contig14742.1.1 vs. uniprot
Match: A0A7R9U3R5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3R5_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 2.800e-20 Identity = 50/113 (44.25%), Postives = 78/113 (69.03%), Query Frame = 1
Query: 22 IMPAIWAQAAVIYALFHVYAYIGILAFAGIESNADFGDAEMAYQPYYYLINFNSYGRAMVTLFCLLVVNNWYIIAAGYAEFSPLGRWCYLYFLSFQIVGVMVALNVLTAIFIN 360
++PA+++Q V++ L HV+A++G+ + G + A + + A+ YY+ NFNSY ++VTLF LLVVNNW+IIA G+ S G+ YLYF++F +V V V LN++TA FI+
Sbjct: 484 VIPAVFSQCQVLFILIHVFAFLGMFIWGGRITAASRYEGDPAF---YYMCNFNSYANSLVTLFDLLVVNNWHIIATGFVGIS--GKVAYLYFVAFNVVAVSVGLNIMTAFFIS 591
BLAST of mRNA_P-wetherbeei_contig14742.1.1 vs. uniprot
Match: A0A0L0DDC3_THETB (Two-pore calcium channel 3 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DDC3_THETB) HSP 1 Score: 79.7 bits (195), Expect = 9.300e-15 Identity = 46/122 (37.70%), Postives = 73/122 (59.84%), Query Frame = 1
Query: 7 SIMYRIMPAIWAQAAVIYALFHVYAYIGILAFAGI--ESNADFGDAEMAYQPYYYLINFNSYGRAMVTLFCLLVVNNWYIIAAGYAEFSPLGRWCYLYFLSFQIVGVMVALNVLTAIFINAF 366
S +++++PA+ A V + +F VYA +G+ F G+ + N D A Y+L +FN G A VTLF L+VVNNW++IA GY S +LYF+SF ++G ++ +N++ A + AF
Sbjct: 543 STLWQLLPALATYAVVQFMVFFVYAILGMALFGGLIHDGNPDLAGTVFA-DSGYFLNSFNDVGYAYVTLFELMVVNNWHVIAEGYVAASGTEA-AWLYFISFNVIGALIIINIVIAFILEAF 662
BLAST of mRNA_P-wetherbeei_contig14742.1.1 vs. uniprot
Match: D8LFM4_ECTSI (Similar to two-pore calcium channel [Arabidopsis thaliana] n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFM4_ECTSI) HSP 1 Score: 77.8 bits (190), Expect = 4.510e-14 Identity = 39/73 (53.42%), Postives = 51/73 (69.86%), Query Frame = 1
Query: 16 YRIMPAIWAQAAVIYALFHVYAYIGILAFAGIES-NADFGDAEMAYQPYYYLINFNSYGRAMVTLFCLLVVNN 231
Y I P+++AQA VI+ +FH+Y Y+G+ + G+ + ADFGD A PYYY NFNSY +VTLF LLVVNN
Sbjct: 533 YMITPSVFAQAGVIFTVFHLYCYLGMALYGGVVTPGADFGDTPFANSPYYYENNFNSYPEGLVTLFELLVVNN 605
BLAST of mRNA_P-wetherbeei_contig14742.1.1 vs. uniprot
Match: A0A7S0NCV6_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0NCV6_9EUKA) HSP 1 Score: 71.2 bits (173), Expect = 1.200e-12 Identity = 46/110 (41.82%), Postives = 63/110 (57.27%), Query Frame = 1
Query: 19 RIMPAIWAQAAVIYALFHVYAYIGILAFAGIESNADFGDAEMAYQPYYYLINFNSYGRAMVTLFCLLVVNNWYIIAAGYAEFSPLGRWCYLYFLSFQIVGVMVALNVLTA 348
R++PA A ++ALF+VYA +GI+ F G G +AY L NFN +G A+VTLF LLVVNNW +I S W +YF+S+ I+ VMV N++ A
Sbjct: 38 RLLPAFSALFGALWALFYVYAQLGIVIFGGRIRTDMAGQPNVAYA----LNNFNDFGSALVTLFELLVVNNWNVIMCEAVAVS--NDWARVYFISWFILAVMVMSNLIVA 141
BLAST of mRNA_P-wetherbeei_contig14742.1.1 vs. uniprot
Match: A0A7S1FFX8_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1FFX8_NOCSC) HSP 1 Score: 70.9 bits (172), Expect = 1.170e-11 Identity = 43/121 (35.54%), Postives = 69/121 (57.02%), Query Frame = 1
Query: 19 RIMPAIWAQAAVIYALFHVYAYIGILAFAG-------IESNADFGDAEMAYQPYYYLINFNSYGRAMVTLFCLLVVNNWYIIAAGYAEFSPLGRWCYLYFLSFQIVGVMVALNVLTAIFIN 360
R+ P ++ +F+V+A +G+ F G S+ DF ++ YY NFN + A VTLFCL+VVNNW+I+A G+ + + G W L+F+ F I+ +V+LN+L A+ I+
Sbjct: 607 RLTPTYRQLGLLLVIVFYVFATLGVQLFGGKIYPGNPALSHTDFDASD------YYDFNFNDFASACVTLFCLMVVNNWFILADGFMKVT--GDWAALFFVGFFIITNLVSLNILMALIID 719
BLAST of mRNA_P-wetherbeei_contig14742.1.1 vs. uniprot
Match: A0A7S4Q6R6_9DINO (Hypothetical protein n=3 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4Q6R6_9DINO) HSP 1 Score: 70.5 bits (171), Expect = 1.590e-11 Identity = 39/116 (33.62%), Postives = 65/116 (56.03%), Query Frame = 1
Query: 19 RIMPAIWAQAAVIYALFHVYAYIGILAFAGI--ESNADFGDAEMAYQPYYYLINFNSYGRAMVTLFCLLVVNNWYIIAAGYAEFSPLGRWCYLYFLSFQIVGVMVALNVLTAIFIN 360
R+ + ++ LF++Y +G F G+ +N D D A Q Y+ +NFN + MVTLF ++VVNNW++I A + + RW +F+SF ++ M+ LN+L A+ I+
Sbjct: 587 RLASTYYRMGMILVVLFYIYGLLGEQFFGGLIYSTNPDLADTAFA-QANYWSMNFNDFNSGMVTLFVIMVVNNWFVITAAFIRAAGT-RWAAAFFVSFYLLVNMIVLNILMALIID 700
BLAST of mRNA_P-wetherbeei_contig14742.1.1 vs. uniprot
Match: A0A7S2E6J0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E6J0_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 2.040e-11 Identity = 42/121 (34.71%), Postives = 66/121 (54.55%), Query Frame = 1
Query: 19 RIMPAIWAQAAVIYALFHVYAYIGILAFAGIESNADFGDAEMAYQPYYYLINFNSYGRAMVTLFCLLVVNNWYIIAAGY--AEFSPLGRWCYLYFLSFQIVGVMVALNVLTAIFINAFNAK 375
+++PA+ ++ H++ YIG+ + G +G+A P Y L NFN+Y +VT+F +LVVN+W+ IA Y A+ Y +F+ + GV + LNVLTA F+ AF K
Sbjct: 55 QVLPAVIGPLVLVVTAMHIFTYIGMAIWGGAVHVGMYGEA---ITPLYDLNNFNTYSAGLVTMFQVLVVNDWHAIAEVYTLADRFSSDIIVYTFFIGANLFGVSILLNVLTAFFVGAFVTK 172
BLAST of mRNA_P-wetherbeei_contig14742.1.1 vs. uniprot
Match: K8YQT3_NANGC (Two-pore calcium channel n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YQT3_NANGC) HSP 1 Score: 69.3 bits (168), Expect = 4.130e-11 Identity = 43/113 (38.05%), Postives = 69/113 (61.06%), Query Frame = 1
Query: 22 IMPAIWAQAAVIYALFHVYAYIGILAFAGIESNADFGDAEMAYQ-PYYYLINFNSYGRAMVTLFCLLVVNNWYIIAAGYAEFSPLGRWCYLYFLSFQIVGVMVALNVLTAIFI 357
++PA+ +QA VI+ L H+ Y G+ F G + A + + YYL+NFN+Y M+TLF LLVVNNW I+A + + YL+F+++Q++ V +AL+ +T+ FI
Sbjct: 630 LVPALLSQATVIFFLMHLTCYAGMYLFGGRIYPSQPIWATLPFPGSLYYLLNFNTYREGMLTLFMLLVVNNWNQISAQFVRVTHPAA--YLFFMAYQVLVVTIALSCVTSFFI 740 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14742.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14742.1.1 >prot_P-wetherbeei_contig14742.1.1 ID=prot_P-wetherbeei_contig14742.1.1|Name=mRNA_P-wetherbeei_contig14742.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=129bp MYRIMPAIWAQAAVIYALFHVYAYIGILAFAGIESNADFGDAEMAYQPYYback to top mRNA from alignment at P-wetherbeei_contig14742:199..829- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14742.1.1 ID=mRNA_P-wetherbeei_contig14742.1.1|Name=mRNA_P-wetherbeei_contig14742.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=631bp|location=Sequence derived from alignment at P-wetherbeei_contig14742:199..829- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14742:199..829- >mRNA_P-wetherbeei_contig14742.1.1 ID=mRNA_P-wetherbeei_contig14742.1.1|Name=mRNA_P-wetherbeei_contig14742.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=387bp|location=Sequence derived from alignment at P-wetherbeei_contig14742:199..829- (Phaeothamnion wetherbeei SAG_119_79)back to top |