mRNA_P-wetherbeei_contig10390.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10390.1.1
Unique NamemRNA_P-wetherbeei_contig10390.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10390.1.1 vs. uniprot
Match: D8LNS7_ECTSI (Mitogen-activated protein kinase (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNS7_ECTSI)

HSP 1 Score: 220 bits (560), Expect = 3.090e-66
Identity = 106/163 (65.03%), Postives = 129/163 (79.14%), Query Frame = 1
Query:    1 YRAPEIMLAADYDFAIDVWSAGCIFAEMIRREPLFRGDTYLQMLKLIVKFLGKPTVD-DLSFVANPKAMKFMVDLPDAPPADMARRFPGAPPEALDLMSKMLSLHPGRRISVDAALAHPYLAPLHDAKLERTAAAPIDFSDVEGGPLTKQNLQRLMFEDVLCF 486
            YR+PEIMLAA+Y + ID+WS GCIFAEM+RREPLFRG+TYLQMLKLI KF+GKP  + +L+FV NPKA KFM DLP+ PPAD+ RRFP A  +A+DL+++ML + P RR+SVD AL HPYL  L D K E TA  P+DF+DVE  PL K NL+RLM EDVL +
Sbjct:  291 YRSPEIMLAAEYGYPIDIWSVGCIFAEMLRREPLFRGETYLQMLKLIAKFVGKPKDESELAFVTNPKAQKFMEDLPEYPPADLRRRFPSAGADAVDLLARMLVMRPDRRLSVDEALRHPYLRSLRDKKAETTALEPVDFADVELAPLNKNNLRRLMHEDVLAY 453          
BLAST of mRNA_P-wetherbeei_contig10390.1.1 vs. uniprot
Match: A0A6V1P443_HETAK (Mitogen-activated protein kinase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P443_HETAK)

HSP 1 Score: 186 bits (471), Expect = 1.680e-53
Identity = 93/163 (57.06%), Postives = 118/163 (72.39%), Query Frame = 1
Query:    1 YRAPEIMLAA-DYDFAIDVWSAGCIFAEMIRREPLFRGDTYLQMLKLIVKFLGKPTVDDLSFVANPKAMKFMVDLPDAPPADMARRFPGAPPEALDLMSKMLSLHPGRRISVDAALAHPYLAPLHDAKLERTAAAPIDFSDVEGGPLTKQNLQRLMFEDVLCF 486
            YRAPEIML+  DY  AIDVWS GCIFAEM+ R+PLF G+ Y+  LKLI K +G PT D+L +V NP+A +FM+ LP  P  D++ +FP A  +ALDL+SKML L P +RI+V+  L HPYLA LHD  LE TA   +++ D+E   LTK+NLQRL+FEDV  F
Sbjct:  303 YRAPEIMLSVQDYSRAIDVWSIGCIFAEMLGRKPLFPGNDYIHQLKLITKVVGTPTEDELGYVENPRAKRFMLGLPPTPRVDLSTKFPDANADALDLLSKMLILDPSKRINVNECLEHPYLASLHDETLEPTADTNVEWDDIETCELTKKNLQRLIFEDVCHF 465          
BLAST of mRNA_P-wetherbeei_contig10390.1.1 vs. uniprot
Match: A0A835Z2Y5_9STRA (Mitogen-activated protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Y5_9STRA)

HSP 1 Score: 181 bits (458), Expect = 1.870e-51
Identity = 92/163 (56.44%), Postives = 119/163 (73.01%), Query Frame = 1
Query:    1 YRAPEIMLAA-DYDFAIDVWSAGCIFAEMIRREPLFRGDTYLQMLKLIVKFLGKPTVDDLSFVANPKAMKFMVDLPDAPPADMARRFPGAPPEALDLMSKMLSLHPGRRISVDAALAHPYLAPLHDAKLERTAAAPIDFSDVEGGPLTKQNLQRLMFEDVLCF 486
            YRAPEIML+  +Y+ AIDVWS GCIF EM+ R+PLF G+ Y+  LKLI K +GKP   DL FV+NP+A +FM+ LPD  PAD+A RFP A  + + L+S+ML+L   +RISV  ALAHPYLA LHDA LE  A + +++ D+E   LTK+NLQ L+F DVL +
Sbjct:  299 YRAPEIMLSVQNYNEAIDVWSVGCIFGEMLGRKPLFPGNDYIHQLKLITKLIGKPAEADLWFVSNPRARRFMLGLPDTAPADLAARFPEASADGIALLSRMLTLDSAKRISVADALAHPYLASLHDATLEPLADSAVNWRDIEEVELTKRNLQLLIFNDVLHY 461          
BLAST of mRNA_P-wetherbeei_contig10390.1.1 vs. uniprot
Match: D8LNL4_ECTSI (Mitogen-activated protein kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNL4_ECTSI)

HSP 1 Score: 177 bits (448), Expect = 3.450e-49
Identity = 88/163 (53.99%), Postives = 115/163 (70.55%), Query Frame = 1
Query:    1 YRAPEIMLAA-DYDFAIDVWSAGCIFAEMIRREPLFRGDTYLQMLKLIVKFLGKPTVDDLSFVANPKAMKFMVDLPDAPPADMARRFPGAPPEALDLMSKMLSLHPGRRISVDAALAHPYLAPLHDAKLERTAAAPIDFSDVEGGPLTKQNLQRLMFEDVLCF 486
            YRAPEIML+  +Y+ AIDVWS GCIF EM+ R+PLF G+ Y+  LKLI   +GKPT  D+ FV NP+A +FM+ LPD  P ++  +FP    +A+DL+SKML L P RRISV+ AL HPYL+ LHD  LE  A + +D+  +E   LTK NL+ L+FEDVL +
Sbjct:  306 YRAPEIMLSVQNYNEAIDVWSVGCIFGEMLGRKPLFAGNDYIHQLKLITSLIGKPTESDIWFVTNPRARRFMLGLPDTSPVNLGVKFPDVNADAVDLLSKMLILDPNRRISVEQALEHPYLSSLHDDALEPLAESHVDWQCIEAVELTKHNLRLLIFEDVLHY 468          
BLAST of mRNA_P-wetherbeei_contig10390.1.1 vs. uniprot
Match: A0A7S2CTH5_9STRA (Mitogen-activated protein kinase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CTH5_9STRA)

HSP 1 Score: 170 bits (430), Expect = 9.040e-49
Identity = 86/162 (53.09%), Postives = 108/162 (66.67%), Query Frame = 1
Query:    1 YRAPEIMLAA-DYDFAIDVWSAGCIFAEMIRREPLFRGDTYLQMLKLIVKFLGKPTVDDLSFVANPKAMKFMVDLPDAPPADMARRFPGAPPEALDLMSKMLSLHPGRRISVDAALAHPYLAPLHDAKLERTAAAPIDFSDVEGGPLTKQNLQRLMFEDVLC 483
            YRAPEIML+  DY  AIDVWS GCIF EM+ R+P+F G  Y+  LKLI+K +G PT  +L FV N KA +F++ LP     D+++ FP A  E LDL+SKML L P RRISV+ ALAHPYLA + D   E  A  P+D+ DVE   L + NL RL+ ED + 
Sbjct:  185 YRAPEIMLSCQDYSCAIDVWSVGCIFGEMLARKPMFPGSDYIHQLKLIMKLVGTPTESELWFVTNQKANRFVLSLPKYDKEDLSKSFPNAEREGLDLLSKMLLLDPARRISVEDALAHPYLAEVRDVDCEAVAPGPVDWGDVETCELNRDNLMRLLVEDFVA 346          
BLAST of mRNA_P-wetherbeei_contig10390.1.1 vs. uniprot
Match: A0A835ZD69_9STRA (Mitogen-activated protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD69_9STRA)

HSP 1 Score: 170 bits (431), Expect = 4.800e-47
Identity = 89/163 (54.60%), Postives = 113/163 (69.33%), Query Frame = 1
Query:    1 YRAPEIMLAADYDFAIDVWSAGCIFAEMIRREPLFRGDTYLQMLKLIVKFLGKPT-VDDLSFVANPKAMKFMVDLPDAPPADMARRFPGAPPEALDLMSKMLSLHPGRRISVDAALAHPYLAPLHDAKLERTAAAPIDFSDVEGGPLTKQNLQRLMFEDVLCF 486
            +RAPE+ L A Y+ AIDVWSAGCI AEM+ ++PLF G    QMLKLI+ F GK +   DLSFVAN KA  ++ ++PD  PAD++ +FP A  +ALDL+ +ML   P RRISV AALAHP+LA    A+ E  A AP+D + VE  PL ++ LQ LMFEDV  F
Sbjct:  303 WRAPEVFLEAKYNVAIDVWSAGCIMAEMMLKKPLFMGSNTAQMLKLILGFCGKNSDTIDLSFVANRKARTYVSEMPDCAPADLSTKFPDASADALDLLRQMLQFSPDRRISVAAALAHPWLARFRVAEREAPAPAPVDLAAVEAAPLARRALQALMFEDVCAF 465          
BLAST of mRNA_P-wetherbeei_contig10390.1.1 vs. uniprot
Match: A0A835ZKF4_9STRA (Mitogen-activated protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKF4_9STRA)

HSP 1 Score: 171 bits (432), Expect = 6.510e-47
Identity = 86/163 (52.76%), Postives = 113/163 (69.33%), Query Frame = 1
Query:    1 YRAPEIMLAADYDFAIDVWSAGCIFAEMIRREPLFRGDTYLQMLKLIVKFLGKP-TVDDLSFVANPKAMKFMVDLPDAPPADMARRFPGAPPEALDLMSKMLSLHPGRRISVDAALAHPYLAPLHDAKLERTAAAPIDFSDVEGGPLTKQNLQRLMFEDVLCF 486
            +RAPE+ L A Y+ AIDVWSAGCI AEM++++PLF G+   QMLKLIV F G+  T  DL+F++N KA  +++D+PD  P ++  +FPGA   ALDL+ +ML  +P  RI+VD ALAHP+LA  H A+    AAAP     VE  PLT+  LQRLM+EDV  F
Sbjct:  304 WRAPEVFLEAKYNVAIDVWSAGCILAEMLQKKPLFMGNNTAQMLKLIVAFCGRARTAADLAFISNRKARSYILDMPDCAPVELPAKFPGASAGALDLLERMLQFNPNARIAVDDALAHPWLARFHAAEHAIAAAAPALLDAVESAPLTRPALQRLMYEDVCAF 466          
BLAST of mRNA_P-wetherbeei_contig10390.1.1 vs. uniprot
Match: A0A6H5JCV3_9PHAE (Mitogen-activated protein kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCV3_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 7.540e-47
Identity = 85/162 (52.47%), Postives = 110/162 (67.90%), Query Frame = 1
Query:    1 YRAPEIMLAADYDFAIDVWSAGCIFAEMIRREPLFRGDTYLQMLKLIVKFLGKPTVDDLSFVANPKAMKFMVDLPDAPPADMARRFPGAPPEALDLMSKMLSLHPGRRISVDAALAHPYLAPLHDAKLERTAAAPIDFSDVEGGPLTKQNLQRLMFEDVLCF 486
            +RAPE+ L A+Y  AIDVWSAGCI AEM++R+PLF G    QML+L+V+F GKP+  DLSFV N KA  +++D+ + P   +  RFP A  EALDL+SKML+  P RRISV  A+ HP+LA  +    E  A  P + + VE   LT+ NLQ+LMFEDV  F
Sbjct:  336 WRAPEVFLEANYGTAIDVWSAGCIMAEMLQRKPLFMGSNTAQMLRLVVQFTGKPSEADLSFVTNKKARNYVLDMAEGPRTSLTERFPDAGAEALDLLSKMLTFDPSRRISVRDAMRHPWLARFYQVAHEDPAPRPAELAAVENLQLTRPNLQQLMFEDVCAF 497          
BLAST of mRNA_P-wetherbeei_contig10390.1.1 vs. uniprot
Match: W7TT92_9STRA (Mitogen-activated protein kinase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TT92_9STRA)

HSP 1 Score: 166 bits (421), Expect = 1.050e-45
Identity = 85/164 (51.83%), Postives = 113/164 (68.90%), Query Frame = 1
Query:    1 YRAPEIMLAA-DYDFAIDVWSAGCIFAEMIRREPLFRGDTYLQMLKLIVKFLGKPTVD-DLSFVANPKAMKFMVDLPDAPPADMARRFPGAPPEALDLMSKMLSLHPGRRISVDAALAHPYLAPLHDAKLERTAAAPIDFSDVEGGPLTKQNLQRLMFEDVLCF 486
            YRAPEIML++ +Y  AIDVW+AGCIF EM+ R+PLF G+ Y+  LKLI + +G PT + DL FV NPKA  FM+ LP +PP D+ +R PG+  EALDL+ +ML L   +RISVDAAL+HP+ A + D  +E     P+ + D+E    T  NLQR ++EDV  F
Sbjct:  302 YRAPEIMLSSQEYSKAIDVWAAGCIFGEMLGRKPLFPGNDYIHQLKLITRIVGTPTSEADLWFVKNPKAKVFMLSLPPSPPQDLTKRLPGSGSEALDLLGRMLQLDYSKRISVDAALSHPFFASVRDEAMEYVCPTPVPWGDLEQCKPTCGNLQRAIWEDVAAF 465          
BLAST of mRNA_P-wetherbeei_contig10390.1.1 vs. uniprot
Match: A0A1V9YD78_9STRA (Mitogen-activated protein kinase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YD78_9STRA)

HSP 1 Score: 154 bits (388), Expect = 6.210e-44
Identity = 78/162 (48.15%), Postives = 102/162 (62.96%), Query Frame = 1
Query:    1 YRAPEIMLAADYDFAIDVWSAGCIFAEMIRREPLFRGDTYLQMLKLIVKFLGKPTVDDLSFVANPKAMKFMVDLPDAPPADMARRFPGAPPEALDLMSKMLSLHPGRRISVDAALAHPYLAPLHDAKLERTAAAPIDFSDVEGGPLTKQNLQRLMFEDVLCF 486
            YRAPE++L++ YD  +DVW+ GCI AEMI R PLF G  YL  LK+I+  +G P  D L F+ NPKA +F++  P  P   ++  +P A    LDL+ KMLS  P  RIS+D AL HPYLA + DA +E     P DF+  E   LT++ LQ L+FEDV  F
Sbjct:   58 YRAPELLLSSKYDKPMDVWAIGCILAEMIGRRPLFPGQDYLHQLKIIMDVVGSPEEDQLDFITNPKAKRFILRQPKKPRVPLSSIYPRATALCLDLLEKMLSFDPRTRISIDDALEHPYLAQVRDASVETACPTPFDFA-FEDCELTRKKLQELIFEDVCHF 218          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10390.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNS7_ECTSI3.090e-6665.03Mitogen-activated protein kinase (Fragment) n=2 Ta... [more]
A0A6V1P443_HETAK1.680e-5357.06Mitogen-activated protein kinase n=1 Tax=Heterosig... [more]
A0A835Z2Y5_9STRA1.870e-5156.44Mitogen-activated protein kinase n=1 Tax=Tribonema... [more]
D8LNL4_ECTSI3.450e-4953.99Mitogen-activated protein kinase n=2 Tax=Ectocarpu... [more]
A0A7S2CTH5_9STRA9.040e-4953.09Mitogen-activated protein kinase n=1 Tax=Florencie... [more]
A0A835ZD69_9STRA4.800e-4754.60Mitogen-activated protein kinase n=1 Tax=Tribonema... [more]
A0A835ZKF4_9STRA6.510e-4752.76Mitogen-activated protein kinase n=1 Tax=Tribonema... [more]
A0A6H5JCV3_9PHAE7.540e-4752.47Mitogen-activated protein kinase n=1 Tax=Ectocarpu... [more]
W7TT92_9STRA1.050e-4551.83Mitogen-activated protein kinase n=2 Tax=Monodopsi... [more]
A0A1V9YD78_9STRA6.210e-4448.15Mitogen-activated protein kinase n=1 Tax=Achlya hy... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10390contigP-wetherbeei_contig10390:1..486 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog164328.Phyra82543
PFAMsPH,Pkinase
Model size486
Max annot lvl4776|Peronosporales
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.01e-39
EggNOG OGsKOG0660@1|root,KOG0660@2759|Eukaryota,3Q8PM@4776|Peronosporales
DescriptionMAP kinase activity
Cds size468
COG categoryT
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185867.0326974-UTR-P-wetherbeei_contig10390:0..181683185867.0326974-UTR-P-wetherbeei_contig10390:0..18Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig10390 1..18 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185867.0424137-CDS-P-wetherbeei_contig10390:18..4861683185867.0424137-CDS-P-wetherbeei_contig10390:18..486Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10390 19..486 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10390.1.1prot_P-wetherbeei_contig10390.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10390 19..486 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10390.1.1

>prot_P-wetherbeei_contig10390.1.1 ID=prot_P-wetherbeei_contig10390.1.1|Name=mRNA_P-wetherbeei_contig10390.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=156bp
MLAADYDFAIDVWSAGCIFAEMIRREPLFRGDTYLQMLKLIVKFLGKPTV
DDLSFVANPKAMKFMVDLPDAPPADMARRFPGAPPEALDLMSKMLSLHPG
RRISVDAALAHPYLAPLHDAKLERTAAAPIDFSDVEGGPLTKQNLQRLMF
EDVLCF
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mRNA from alignment at P-wetherbeei_contig10390:1..486+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10390.1.1 ID=mRNA_P-wetherbeei_contig10390.1.1|Name=mRNA_P-wetherbeei_contig10390.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=486bp|location=Sequence derived from alignment at P-wetherbeei_contig10390:1..486+ (Phaeothamnion wetherbeei SAG_119_79)
TACCGCGCCCCTGAAATCATGCTGGCGGCCGACTACGACTTTGCGATCGA CGTGTGGTCTGCGGGTTGCATCTTTGCCGAGATGATCCGCCGGGAGCCGC TCTTCCGCGGCGACACGTACCTTCAGATGCTGAAACTGATCGTCAAGTTT CTCGGCAAGCCGACGGTGGACGATTTGTCCTTCGTGGCCAATCCCAAGGC CATGAAGTTCATGGTGGACCTACCGGATGCGCCGCCCGCCGACATGGCGC GGCGTTTCCCGGGGGCGCCGCCGGAGGCGCTGGACCTGATGTCGAAGATG CTATCGCTGCACCCGGGGCGGCGGATATCGGTCGACGCGGCGCTGGCGCA CCCGTACCTGGCGCCGCTGCATGACGCCAAGCTGGAACGGACGGCGGCAG CGCCCATCGACTTTAGCGACGTCGAAGGCGGGCCGCTCACCAAGCAGAAT CTGCAGCGGCTCATGTTCGAAGATGTGCTCTGCTTC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10390:1..486+

>mRNA_P-wetherbeei_contig10390.1.1 ID=mRNA_P-wetherbeei_contig10390.1.1|Name=mRNA_P-wetherbeei_contig10390.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=468bp|location=Sequence derived from alignment at P-wetherbeei_contig10390:1..486+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGGCGGCCGACTACGACTTTGCGATCGACGTGTGGTCTGCGGGTTG
CATCTTTGCCGAGATGATCCGCCGGGAGCCGCTCTTCCGCGGCGACACGT
ACCTTCAGATGCTGAAACTGATCGTCAAGTTTCTCGGCAAGCCGACGGTG
GACGATTTGTCCTTCGTGGCCAATCCCAAGGCCATGAAGTTCATGGTGGA
CCTACCGGATGCGCCGCCCGCCGACATGGCGCGGCGTTTCCCGGGGGCGC
CGCCGGAGGCGCTGGACCTGATGTCGAAGATGCTATCGCTGCACCCGGGG
CGGCGGATATCGGTCGACGCGGCGCTGGCGCACCCGTACCTGGCGCCGCT
GCATGACGCCAAGCTGGAACGGACGGCGGCAGCGCCCATCGACTTTAGCG
ACGTCGAAGGCGGGCCGCTCACCAAGCAGAATCTGCAGCGGCTCATGTTC
GAAGATGTGCTCTGCTTC
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