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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Model size | 4197 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-11_001070.1 |
| Cds size | 3678 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1683186031.8391993-UTR-P-wetherbeei_contig1473:1786..1859 | 1683186031.8391993-UTR-P-wetherbeei_contig1473:1786..1859 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig1473 1787..1859 + |
| 1683186031.8763785-UTR-P-wetherbeei_contig1473:5734..6180 | 1683186031.8763785-UTR-P-wetherbeei_contig1473:5734..6180 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig1473 5735..6180 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1683186031.8538003-CDS-P-wetherbeei_contig1473:1859..2032 | 1683186031.8538003-CDS-P-wetherbeei_contig1473:1859..2032 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig1473 1860..2032 + |
| 1683186031.8653588-CDS-P-wetherbeei_contig1473:2229..5734 | 1683186031.8653588-CDS-P-wetherbeei_contig1473:2229..5734 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig1473 2230..5734 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1473.2.1 >prot_P-wetherbeei_contig1473.2.1 ID=prot_P-wetherbeei_contig1473.2.1|Name=mRNA_P-wetherbeei_contig1473.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=1226bp
MDGLKWTEVPRAAEVLHVRVPRLLALLGRGRFVDAALAIGNRSGISSPFF LLVEAEEMYYHMTYLEEPHLEDFELARMYSHAANALDRLQAAFEGDTATD TCIKATSSAAAAAGAVGGWQAAALRCDRRDSGSGSEGGSSGDEGSGGSDC GFQAGGAGSFGSRKGFGRRRSGSGGTGGKKKKRHGRGRGPLPASRLAQEL RVATGAHDGANGSGNIGSGGAGECNAVVTAAKEPETSISLAGAAVEAAGG AKFAEIAANSANVAAAETTTAAASSLCVALSQLVAFTQIRIGLADLYRTL ALGAPVCSYAAVADEAASVGRQASALLTHPWLAPVAAAVWAEVRALELAF AALRRLDACVLYESTVATLRLQRALKEWWDWVESDCGGRDGSSGAVSNCN SSGTVSNGNSGRRDGGSRAVYNGNSGGSGGSDSTNSGGGDGYVAGLVVDT RQVARTGPFPPGKRNGLLGVTGPLPSESAKVSAPQPPPLTPRPLLPHALR WLCEVRQVVCDRVPLHFSHAIETAQGVVAARALFACARTNFAKAIDDFLL RCCAHGCGCVALVVTVPAGATGGGSGGIGGIGGSSSGGGGVGGGGIAGQG TAAVGSAYATGLGYCFPSEPPLPSAMQRHQQQPRGRQEDGQQGLSFTGAD EALQTPLPSPMAGLPPLGPGLLAASPLPQDGNGSFALLASPNSASFAVAT GVTAAAVAAPAAASAAVAAAVGADDEPFQVESERFVFKLVRFPAAAAPDS AVKRGPRPQTRSDAPSTDTELSAVATAAVVAAAAVTPVATAAGGVAVSGT SPAVALPPRPARGPTGSLTGETSGSDPTHATATSFSAPSKAGAAAAGGGP LAAVAAAVQPLRLRLASSSTGRSREGSAAMEDFHAAEDWPDGSGSGADVA DGDGMTSVSAAMGGSIGGVGGSGTPFLPLGGPTPDGRRASATPQHAWPPA FMRFSRRDAVLAASDLRTPGVSSASLAASDYHNVDGSGSGGGIGGIGGSG PLRRDASFATSRGSVASFASSSSTLVAAVIDSLAEAAAVAASGAGAPLWP LEHWRQVETLLSQLPPASHGTRSRAAPHVDSRRQSRASFSGPAGGAGGAG TAGGGGGSGGSGGGSGGGLQYSYHAARVSETLAVVAIVGEKRRQSDKGAV EFLEWLAAQLGDKPVLAALCPDKAVAAVAAADSAAAAAGDGKNGINGSVG SNGSTGGGDVLSRAAPHRQRAVLAC* back to topmRNA from alignment at P-wetherbeei_contig1473:1787..6180+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig1473.2.1 ID=mRNA_P-wetherbeei_contig1473.2.1|Name=mRNA_P-wetherbeei_contig1473.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4394bp|location=Sequence derived from alignment at P-wetherbeei_contig1473:1787..6180+ (Phaeothamnion wetherbeei SAG_119_79) ACAGAATGTTGCAGTCCTAGTTGTATTATCACCACGCTACGCGGTGAATG
CATCGCCGTCGTACCTTTCCTTCATGGATGGGCTGAAATGGACCGAAGTG
CCTCGAGCTGCGGAGGTCTTGCATGTTCGTGTGCCTCGTCTCCTTGCGCT
CCTCGGGCGAGGGCGCTTTGTCGATGCCGCCCTTGCAATTGGCAATCGTA
GCGGCATCTCAAGCCCATTCTTTCTCCTTGTGGAAGCCGAAGAAATGCAA
GTCACCTCGAGTAAACCTACGATCCGCATCTTCGTCTCTCTCTCTTCCCT
TTATGACTTTCTGCATTTCTTAAAGCGAGCTTCGCAGAGAGAGGTTTGCG
ATTTGATTCAAGATACTGCTGCTGCTTAATGTGGCTCATCTCCTGGTAGC
CTCACAGTCTTTCCCGCGTACCCCCCCTCTCCCTTGCCAACAGGTACTAT
CACATGACATACCTGGAGGAGCCGCATTTGGAGGATTTCGAGCTCGCCCG
CATGTACTCGCATGCCGCCAATGCCCTCGATCGCCTGCAGGCCGCCTTTG
AAGGAGACACGGCGACAGACACCTGTATCAAAGCCACCTCTTCTGCCGCC
GCCGCTGCCGGGGCGGTGGGGGGCTGGCAGGCGGCGGCGCTGCGGTGCGA
CAGAAGAGACAGCGGCAGCGGCAGCGAAGGCGGCAGCAGCGGAGACGAAG
GGAGCGGCGGGAGCGATTGCGGCTTCCAAGCCGGTGGCGCCGGCAGCTTT
GGCAGCAGGAAGGGCTTTGGCAGGCGCCGCAGCGGCAGCGGCGGAACTGG
CGGCAAGAAGAAGAAACGCCACGGCCGCGGTCGGGGACCGCTTCCCGCCA
GCAGGCTGGCGCAAGAGCTGCGCGTCGCCACCGGCGCTCACGACGGCGCC
AACGGCAGCGGCAACATAGGCAGCGGTGGTGCCGGTGAGTGCAACGCTGT
TGTCACGGCAGCAAAAGAGCCGGAAACATCCATCTCCTTGGCCGGAGCAG
CGGTGGAAGCAGCGGGAGGCGCCAAATTCGCGGAGATCGCCGCAAATTCG
GCGAACGTTGCGGCAGCAGAGACAACCACAGCGGCGGCGTCGTCCCTCTG
CGTGGCCCTTTCCCAGCTTGTCGCCTTCACCCAGATCCGCATCGGACTTG
CGGACCTCTACCGGACCTTGGCCCTCGGCGCGCCCGTTTGCAGCTACGCC
GCTGTCGCTGATGAGGCGGCGTCGGTCGGGCGGCAGGCGTCAGCACTGCT
GACGCACCCGTGGCTGGCACCGGTGGCAGCGGCAGTCTGGGCCGAGGTAC
GGGCGTTGGAGCTGGCTTTTGCAGCGCTGCGGCGGCTGGATGCGTGCGTG
CTGTACGAGTCGACGGTGGCGACGCTCCGGCTGCAGCGAGCTCTGAAAGA
GTGGTGGGATTGGGTGGAGAGCGACTGCGGTGGCCGAGACGGCAGCAGCG
GCGCTGTATCCAACTGCAACAGCAGCGGCACTGTATCCAATGGCAACAGC
GGCCGCAGAGACGGCGGCAGCCGCGCTGTATACAACGGCAACAGCGGCGG
CAGCGGCGGCAGCGACAGCACCAACAGCGGAGGCGGCGACGGCTATGTGG
CCGGTCTCGTGGTCGATACCCGGCAGGTGGCCCGCACCGGGCCCTTTCCA
CCAGGCAAGCGCAACGGATTGCTTGGGGTAACGGGCCCGCTGCCATCAGA
GAGCGCCAAAGTTTCGGCGCCGCAGCCGCCGCCGCTGACGCCACGGCCAT
TACTGCCGCACGCACTGCGGTGGCTCTGCGAGGTGCGCCAAGTAGTCTGC
GATCGTGTCCCGCTGCACTTCTCGCACGCCATCGAGACGGCGCAGGGCGT
GGTGGCGGCCCGGGCGCTCTTTGCGTGCGCACGAACCAACTTTGCCAAAG
CGATCGACGACTTCCTACTAAGGTGCTGTGCGCACGGCTGCGGTTGCGTG
GCACTGGTCGTGACGGTACCGGCGGGTGCTACGGGCGGTGGTAGTGGCGG
TATCGGTGGCATCGGTGGCAGCAGCAGCGGCGGTGGCGGGGTAGGAGGAG
GTGGAATCGCGGGGCAAGGCACTGCCGCTGTGGGCAGTGCCTACGCGACT
GGCCTCGGGTACTGTTTCCCTTCGGAGCCGCCGTTGCCGAGCGCGATGCA
GCGACATCAACAGCAGCCAAGAGGGCGCCAGGAGGACGGACAGCAGGGTC
TCTCATTCACGGGTGCTGACGAAGCGCTTCAGACTCCACTGCCGTCGCCA
ATGGCGGGGCTACCGCCGCTGGGACCAGGTCTTCTTGCGGCCTCGCCGCT
ACCGCAAGATGGCAACGGCAGCTTTGCTCTTTTGGCGTCGCCGAACAGCG
CCAGTTTTGCCGTCGCAACGGGCGTGACAGCTGCGGCAGTGGCAGCGCCG
GCGGCAGCTTCGGCAGCGGTGGCGGCGGCGGTAGGGGCGGACGACGAACC
GTTTCAGGTCGAGTCCGAGCGCTTTGTGTTTAAGCTCGTCCGCTTTCCGG
CAGCGGCAGCGCCAGATTCCGCCGTGAAACGGGGGCCGAGGCCGCAAACT
CGCAGCGACGCACCCTCGACTGACACAGAGCTCTCAGCTGTGGCGACTGC
GGCAGTAGTGGCGGCGGCCGCAGTGACGCCGGTCGCCACTGCCGCGGGAG
GGGTGGCAGTATCGGGTACGTCGCCTGCGGTGGCGCTTCCTCCGCGTCCG
GCCCGCGGGCCGACCGGAAGCCTGACTGGCGAAACCTCCGGATCTGATCC
GACCCATGCCACCGCGACCAGTTTTTCTGCGCCGTCAAAGGCGGGGGCGG
CGGCGGCGGGCGGCGGGCCGCTGGCGGCAGTGGCGGCGGCGGTGCAGCCG
TTGCGACTGCGGCTGGCCAGCTCAAGCACCGGCCGCAGCCGGGAGGGGTC
GGCGGCAATGGAAGACTTTCACGCCGCTGAAGACTGGCCGGACGGCAGCG
GCAGCGGCGCGGACGTGGCAGATGGCGATGGGATGACTTCAGTCTCGGCA
GCTATGGGAGGGAGCATTGGTGGAGTTGGCGGCAGCGGGACGCCTTTCCT
CCCGTTGGGAGGGCCGACGCCGGACGGAAGAAGGGCATCGGCGACGCCGC
AGCATGCCTGGCCACCTGCGTTCATGCGCTTCTCGCGACGTGACGCAGTC
TTGGCGGCCTCAGACCTCCGAACGCCCGGTGTTTCCTCCGCATCGCTCGC
CGCCTCGGATTATCACAACGTCGACGGCAGCGGCAGCGGCGGCGGCATCG
GTGGGATCGGCGGGAGCGGGCCGCTGCGACGGGACGCGTCTTTTGCCACC
AGCCGCGGCAGCGTGGCATCCTTCGCTTCGTCGTCTTCAACGCTCGTGGC
CGCGGTCATTGACTCGCTGGCCGAGGCCGCCGCTGTGGCCGCTTCGGGCG
CCGGCGCGCCGCTGTGGCCGCTGGAGCATTGGCGGCAGGTGGAGACCCTG
CTCTCGCAGCTGCCGCCAGCATCGCACGGTACCCGCTCACGGGCAGCGCC
ACACGTCGACAGCCGCCGCCAGAGCCGCGCCTCCTTTTCGGGTCCGGCGG
GAGGTGCTGGCGGTGCTGGTACTGCCGGCGGAGGCGGAGGCAGCGGCGGG
AGCGGCGGTGGCAGTGGTGGAGGCCTGCAGTATAGCTACCACGCCGCGCG
CGTCTCGGAGACGCTCGCCGTGGTGGCGATCGTCGGGGAGAAACGGCGGC
AGAGCGACAAGGGGGCTGTCGAGTTTCTTGAATGGCTGGCGGCGCAGCTT
GGTGACAAGCCAGTGCTGGCAGCGTTGTGTCCGGATAAGGCTGTCGCGGC
GGTGGCAGCTGCGGACTCTGCTGCGGCTGCTGCCGGGGACGGGAAGAACG
GCATCAACGGCAGCGTTGGCAGCAATGGCAGCACTGGTGGCGGCGATGTG
TTGTCAAGGGCGGCGCCGCATCGCCAGCGAGCCGTGCTGGCCTGCTAGTC
GGGGTCTACTTTAAGTCACATTTTGGATGTGATTAAAGAAAGTAAAAGGT
GTAGCAGGGGGAAGAATGATAAACACGGAACTGTGATCCATTTGGGGAAA
TTAGCATTTGGCAATCACGGTAGGCGTCCCGCCTGGGCTGAAAGGCATAG
AGCGTAGGTTATGACAGCGGCTGCATGATCCAGTGCCGAAAACTGTACCT
GGGTGTTAGTGAGAGCAGGCTTCTCCCGCCTTTTGGGCGGCAGGCGGCCG
CTGGTAAAGCGGTGCCGGCAGAGCGAGCCAGCCACTCTATGCTGACTACT
TCAAGAGAGTCAGAAAAGATCGTGAGCAACCGCTACTGAACATTGCAGAA
GCCACTTTTAGAGCTGCCTGGTCATCTTGCAGTATGTTTGGGCAGCTCAC
TCTCAACTCAGCACGGGAAAAGAATACAGTTGCGTGTCCGGGAA back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig1473:1787..6180+ >mRNA_P-wetherbeei_contig1473.2.1 ID=mRNA_P-wetherbeei_contig1473.2.1|Name=mRNA_P-wetherbeei_contig1473.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=3678bp|location=Sequence derived from alignment at P-wetherbeei_contig1473:1787..6180+ (Phaeothamnion wetherbeei SAG_119_79) ATGGATGGGCTGAAATGGACCGAAGTGCCTCGAGCTGCGGAGGTCTTGCA TGTTCGTGTGCCTCGTCTCCTTGCGCTCCTCGGGCGAGGGCGCTTTGTCG ATGCCGCCCTTGCAATTGGCAATCGTAGCGGCATCTCAAGCCCATTCTTT CTCCTTGTGGAAGCCGAAGAAATGTACTATCACATGACATACCTGGAGGA GCCGCATTTGGAGGATTTCGAGCTCGCCCGCATGTACTCGCATGCCGCCA ATGCCCTCGATCGCCTGCAGGCCGCCTTTGAAGGAGACACGGCGACAGAC ACCTGTATCAAAGCCACCTCTTCTGCCGCCGCCGCTGCCGGGGCGGTGGG GGGCTGGCAGGCGGCGGCGCTGCGGTGCGACAGAAGAGACAGCGGCAGCG GCAGCGAAGGCGGCAGCAGCGGAGACGAAGGGAGCGGCGGGAGCGATTGC GGCTTCCAAGCCGGTGGCGCCGGCAGCTTTGGCAGCAGGAAGGGCTTTGG CAGGCGCCGCAGCGGCAGCGGCGGAACTGGCGGCAAGAAGAAGAAACGCC ACGGCCGCGGTCGGGGACCGCTTCCCGCCAGCAGGCTGGCGCAAGAGCTG CGCGTCGCCACCGGCGCTCACGACGGCGCCAACGGCAGCGGCAACATAGG CAGCGGTGGTGCCGGTGAGTGCAACGCTGTTGTCACGGCAGCAAAAGAGC CGGAAACATCCATCTCCTTGGCCGGAGCAGCGGTGGAAGCAGCGGGAGGC GCCAAATTCGCGGAGATCGCCGCAAATTCGGCGAACGTTGCGGCAGCAGA GACAACCACAGCGGCGGCGTCGTCCCTCTGCGTGGCCCTTTCCCAGCTTG TCGCCTTCACCCAGATCCGCATCGGACTTGCGGACCTCTACCGGACCTTG GCCCTCGGCGCGCCCGTTTGCAGCTACGCCGCTGTCGCTGATGAGGCGGC GTCGGTCGGGCGGCAGGCGTCAGCACTGCTGACGCACCCGTGGCTGGCAC CGGTGGCAGCGGCAGTCTGGGCCGAGGTACGGGCGTTGGAGCTGGCTTTT GCAGCGCTGCGGCGGCTGGATGCGTGCGTGCTGTACGAGTCGACGGTGGC GACGCTCCGGCTGCAGCGAGCTCTGAAAGAGTGGTGGGATTGGGTGGAGA GCGACTGCGGTGGCCGAGACGGCAGCAGCGGCGCTGTATCCAACTGCAAC AGCAGCGGCACTGTATCCAATGGCAACAGCGGCCGCAGAGACGGCGGCAG CCGCGCTGTATACAACGGCAACAGCGGCGGCAGCGGCGGCAGCGACAGCA CCAACAGCGGAGGCGGCGACGGCTATGTGGCCGGTCTCGTGGTCGATACC CGGCAGGTGGCCCGCACCGGGCCCTTTCCACCAGGCAAGCGCAACGGATT GCTTGGGGTAACGGGCCCGCTGCCATCAGAGAGCGCCAAAGTTTCGGCGC CGCAGCCGCCGCCGCTGACGCCACGGCCATTACTGCCGCACGCACTGCGG TGGCTCTGCGAGGTGCGCCAAGTAGTCTGCGATCGTGTCCCGCTGCACTT CTCGCACGCCATCGAGACGGCGCAGGGCGTGGTGGCGGCCCGGGCGCTCT TTGCGTGCGCACGAACCAACTTTGCCAAAGCGATCGACGACTTCCTACTA AGGTGCTGTGCGCACGGCTGCGGTTGCGTGGCACTGGTCGTGACGGTACC GGCGGGTGCTACGGGCGGTGGTAGTGGCGGTATCGGTGGCATCGGTGGCA GCAGCAGCGGCGGTGGCGGGGTAGGAGGAGGTGGAATCGCGGGGCAAGGC ACTGCCGCTGTGGGCAGTGCCTACGCGACTGGCCTCGGGTACTGTTTCCC TTCGGAGCCGCCGTTGCCGAGCGCGATGCAGCGACATCAACAGCAGCCAA GAGGGCGCCAGGAGGACGGACAGCAGGGTCTCTCATTCACGGGTGCTGAC GAAGCGCTTCAGACTCCACTGCCGTCGCCAATGGCGGGGCTACCGCCGCT GGGACCAGGTCTTCTTGCGGCCTCGCCGCTACCGCAAGATGGCAACGGCA GCTTTGCTCTTTTGGCGTCGCCGAACAGCGCCAGTTTTGCCGTCGCAACG GGCGTGACAGCTGCGGCAGTGGCAGCGCCGGCGGCAGCTTCGGCAGCGGT GGCGGCGGCGGTAGGGGCGGACGACGAACCGTTTCAGGTCGAGTCCGAGC GCTTTGTGTTTAAGCTCGTCCGCTTTCCGGCAGCGGCAGCGCCAGATTCC GCCGTGAAACGGGGGCCGAGGCCGCAAACTCGCAGCGACGCACCCTCGAC TGACACAGAGCTCTCAGCTGTGGCGACTGCGGCAGTAGTGGCGGCGGCCG CAGTGACGCCGGTCGCCACTGCCGCGGGAGGGGTGGCAGTATCGGGTACG TCGCCTGCGGTGGCGCTTCCTCCGCGTCCGGCCCGCGGGCCGACCGGAAG CCTGACTGGCGAAACCTCCGGATCTGATCCGACCCATGCCACCGCGACCA GTTTTTCTGCGCCGTCAAAGGCGGGGGCGGCGGCGGCGGGCGGCGGGCCG CTGGCGGCAGTGGCGGCGGCGGTGCAGCCGTTGCGACTGCGGCTGGCCAG CTCAAGCACCGGCCGCAGCCGGGAGGGGTCGGCGGCAATGGAAGACTTTC ACGCCGCTGAAGACTGGCCGGACGGCAGCGGCAGCGGCGCGGACGTGGCA GATGGCGATGGGATGACTTCAGTCTCGGCAGCTATGGGAGGGAGCATTGG TGGAGTTGGCGGCAGCGGGACGCCTTTCCTCCCGTTGGGAGGGCCGACGC CGGACGGAAGAAGGGCATCGGCGACGCCGCAGCATGCCTGGCCACCTGCG TTCATGCGCTTCTCGCGACGTGACGCAGTCTTGGCGGCCTCAGACCTCCG AACGCCCGGTGTTTCCTCCGCATCGCTCGCCGCCTCGGATTATCACAACG TCGACGGCAGCGGCAGCGGCGGCGGCATCGGTGGGATCGGCGGGAGCGGG CCGCTGCGACGGGACGCGTCTTTTGCCACCAGCCGCGGCAGCGTGGCATC CTTCGCTTCGTCGTCTTCAACGCTCGTGGCCGCGGTCATTGACTCGCTGG CCGAGGCCGCCGCTGTGGCCGCTTCGGGCGCCGGCGCGCCGCTGTGGCCG CTGGAGCATTGGCGGCAGGTGGAGACCCTGCTCTCGCAGCTGCCGCCAGC ATCGCACGGTACCCGCTCACGGGCAGCGCCACACGTCGACAGCCGCCGCC AGAGCCGCGCCTCCTTTTCGGGTCCGGCGGGAGGTGCTGGCGGTGCTGGT ACTGCCGGCGGAGGCGGAGGCAGCGGCGGGAGCGGCGGTGGCAGTGGTGG AGGCCTGCAGTATAGCTACCACGCCGCGCGCGTCTCGGAGACGCTCGCCG TGGTGGCGATCGTCGGGGAGAAACGGCGGCAGAGCGACAAGGGGGCTGTC GAGTTTCTTGAATGGCTGGCGGCGCAGCTTGGTGACAAGCCAGTGCTGGC AGCGTTGTGTCCGGATAAGGCTGTCGCGGCGGTGGCAGCTGCGGACTCTG CTGCGGCTGCTGCCGGGGACGGGAAGAACGGCATCAACGGCAGCGTTGGC AGCAATGGCAGCACTGGTGGCGGCGATGTGTTGTCAAGGGCGGCGCCGCA TCGCCAGCGAGCCGTGCTGGCCTGCTAG back to top
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