mRNA_P-wetherbeei_contig14727.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14727.1.1 vs. uniprot
Match: UPI001C9BC1AB (secreted RxLR effector protein 161-like n=1 Tax=Venturia canescens TaxID=32260 RepID=UPI001C9BC1AB) HSP 1 Score: 115 bits (288), Expect = 1.640e-27 Identity = 63/145 (43.45%), Postives = 92/145 (63.45%), Query Frame = 2
Query: 20 LELVGYSDANLAGCLDSGRSTTGSLFLLAGGVVVFSSRLQHSVARSTMESEYMALFDVAQEAEQLRTLLAHLGVEQTAPTVIHEDNTAALAVAMAAGHTRQSRHIRIRYHVTRELVAAGVIVVEQVSTADQLADGLTKNVGQERL 454
++ YSDA+ AG +D+ RSTTG + L+AGG V++SS Q ++RST E+EY+A D +QE LR LL L V+ PT +H DN +A+ + H ++++HI I+YH RE V G I + V T +QLAD LTK V +++
Sbjct: 99 IDFTAYSDADFAGDVDTRRSTTGYITLMAGGPVIWSSHRQKCISRSTTEAEYVAASDASQEVTWLRILLQELCVDLKNPTPLHMDNQSAIRLTKNTEHHKKTKHIDIKYHYIRECVEHGAIKIIYVCTEEQLADILTKAVPRDKF 243
BLAST of mRNA_P-wetherbeei_contig14727.1.1 vs. uniprot
Match: A0A2P4XPH2_9STRA (RxLR effector candidate protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XPH2_9STRA) HSP 1 Score: 113 bits (283), Expect = 6.450e-27 Identity = 61/143 (42.66%), Postives = 91/143 (63.64%), Query Frame = 2
Query: 23 ELVGYSDANLAGCLDSGRSTTGSLFLLAGGVVVFSSRLQHSVARSTMESEYMALFDVAQEAEQLRTLLAHLGVEQTAPTVIHEDNTAALAVAMAAGHTRQSRHIRIRYHVTRELVAAGVIVVEQVSTADQLADGLTKNVGQER 451
ELVGY+DAN AG LD+ RSTTG +F L G + + S+ Q +VA S+ E+EYMAL++ QEA LR LL LG E T I++DN +A+A + +++HI I++H RE V + + +E T + +ADG TK + +++
Sbjct: 86 ELVGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNAIQEAVWLRQLLKDLGYENKGATTIYQDNQGCIALAKNPAYHTRTKHIDIKFHFLREKVESKTVELEYKPTDEMIADGFTKALARDK 228
BLAST of mRNA_P-wetherbeei_contig14727.1.1 vs. uniprot
Match: A0A182GEU4_AEDAL (Uncharacterized protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GEU4_AEDAL) HSP 1 Score: 113 bits (283), Expect = 8.890e-27 Identity = 68/144 (47.22%), Postives = 89/144 (61.81%), Query Frame = 2
Query: 23 ELVGYSDANLAGCLDSGRSTTGSLFLLAGGVVVFSSRLQHSVARSTMESEYMALFDVAQEAEQLRTLLAHLGVEQTAPTVIHEDNTAALAVAMAAGHTRQSRHIRIRYHVTRELVAAGVIVVEQVSTADQLADGLTKNVGQERL 454
+LVGYSDA+ AG + +S +G LF L G V ++SR Q V STME+EY+AL + AQEA LR LL L EQT PTVI EDN + L A+ ++S+H+ RYH TRELV I + T + LAD LTK +G ++
Sbjct: 95 KLVGYSDADWAGDANDRKSCSGFLFGLGGATVSWTSRKQTCVTMSTMEAEYVALSEAAQEAVWLRGLLKELNEEQTKPTVIFEDNRSCLDFAVLDQQRKRSKHVDTRYHYTRELVTQKQIELRYCPTDEMLADVLTKPLGSTKV 238
BLAST of mRNA_P-wetherbeei_contig14727.1.1 vs. uniprot
Match: A0A1X7SEB0_AMPQE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7SEB0_AMPQE) HSP 1 Score: 113 bits (282), Expect = 3.870e-26 Identity = 63/143 (44.06%), Postives = 88/143 (61.54%), Query Frame = 2
Query: 26 LVGYSDANLAGCLDSGRSTTGSLFLLAGGVVVFSSRLQHSVARSTMESEYMALFDVAQEAEQLRTLLAHLGVEQTAPTVIHEDNTAALAVAMAAGHTRQSRHIRIRYHVTRELVAAGVIVVEQVSTADQLADGLTKNVGQERL 454
LVGYSDA+ AG LD ST+G+LFLLAGG + + S+ Q +V+ ST E+EY++L QEA +R LL + Q APTVI EDN +A+A +++HI I+YH RE + G + +E T + +AD TK + ER
Sbjct: 151 LVGYSDADWAGDLDDRHSTSGNLFLLAGGAISWLSKKQPTVSLSTAEAEYVSLCSATQEAVWIRRLLHDINCSQGAPTVIKEDNQGTIAIARNPVSHSRTKHIEIKYHYVRETIMDGQVSLEYCPTEEMIADLFTKPLASERF 293
BLAST of mRNA_P-wetherbeei_contig14727.1.1 vs. uniprot
Match: A0A2P4YHT5_9STRA (RxLR effector candidate protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YHT5_9STRA) HSP 1 Score: 112 bits (281), Expect = 1.010e-25 Identity = 61/137 (44.53%), Postives = 87/137 (63.50%), Query Frame = 2
Query: 23 ELVGYSDANLAGCLDSGRSTTGSLFLLAGGVVVFSSRLQHSVARSTMESEYMALFDVAQEAEQLRTLLAHLGVEQTAPTVIHEDNTAALAVAMAAGHTRQSRHIRIRYHVTRELVAAGVIVVEQVSTADQLADGLTK 433
ELVGY+DAN AG LD+ RSTTG +F L G + + S+ Q +VA S+ E+EYMAL++ QEA LR LL LG E T I++DN +A+A + +++HI I++H RE V + + +E T + +ADG TK
Sbjct: 191 ELVGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNAIQEAVWLRQLLKDLGYENKGATTIYQDNQGCIALAKNPAYHTRTKHIDIKFHFLREKVESKTVELEYKPTDEMIADGFTK 327
BLAST of mRNA_P-wetherbeei_contig14727.1.1 vs. uniprot
Match: H3GB69_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB69_PHYRM) HSP 1 Score: 112 bits (279), Expect = 1.110e-25 Identity = 61/137 (44.53%), Postives = 86/137 (62.77%), Query Frame = 2
Query: 23 ELVGYSDANLAGCLDSGRSTTGSLFLLAGGVVVFSSRLQHSVARSTMESEYMALFDVAQEAEQLRTLLAHLGVEQTAPTVIHEDNTAALAVAMAAGHTRQSRHIRIRYHVTRELVAAGVIVVEQVSTADQLADGLTK 433
EL+GY+DAN AG LD+ RSTTG +F L G + + S+ Q +VA S+ E+EYMAL++ QEA LR LL +G E T +DN +A+A + +++HI ++YH RE V VIV+E T + +ADG TK
Sbjct: 158 ELIGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVGATTFFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVLEYKPTDEMIADGFTK 294
BLAST of mRNA_P-wetherbeei_contig14727.1.1 vs. uniprot
Match: H3GB17_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB17_PHYRM) HSP 1 Score: 113 bits (282), Expect = 1.790e-25 Identity = 62/137 (45.26%), Postives = 88/137 (64.23%), Query Frame = 2
Query: 23 ELVGYSDANLAGCLDSGRSTTGSLFLLAGGVVVFSSRLQHSVARSTMESEYMALFDVAQEAEQLRTLLAHLGVEQTAPTVIHEDNTAALAVAMAAGHTRQSRHIRIRYHVTRELVAAGVIVVEQVSTADQLADGLTK 433
EL+GY+DA+ AG LD+ RSTTG +F L G + + S+ Q +VA S+ E+EYMAL++ QEA LR LL +G E A T I +DN +A+A + +++HI ++YH RE V VIV+E T + +ADG TK
Sbjct: 254 ELIGYADASWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVAATTIFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVLEYKPTDEMIADGFTK 390
BLAST of mRNA_P-wetherbeei_contig14727.1.1 vs. uniprot
Match: UPI00193CD1D9 (secreted RxLR effector protein 161-like n=1 Tax=Solenopsis invicta TaxID=13686 RepID=UPI00193CD1D9) HSP 1 Score: 108 bits (270), Expect = 2.630e-25 Identity = 61/145 (42.07%), Postives = 91/145 (62.76%), Query Frame = 2
Query: 23 ELVGYSDANLAGCLDSGRSTTGSLFLLAGGVVVFSSRLQHSVARSTMESEYMALFDVAQEAEQLRTLLAHLGVEQTAPTVIHEDNTAALAVAMAAGHTRQSRHIRIRYHVTRELVAAGVIVVEQVSTADQLADGLTKNVGQERLE 457
+L+ YSDA+ A CLD+ +ST+G + +L G +++SSR +H VA ST ++EY+A +D +E R LL +GVEQ PT + DN A + R+S+H+ I++H TRELV I ++ VST QLAD LTK + + + E
Sbjct: 59 QLIAYSDADYASCLDTRKSTSGVILMLNDGPIIWSSR-KHIVATSTTDAEYVAAYDATKEVVWSRQLLKDIGVEQFEPTTLFCDNAATQKLIENPIFHRKSKHVDIKFHYTRELVKQKQIKIQHVSTQSQLADILTKPLARGKFE 202
BLAST of mRNA_P-wetherbeei_contig14727.1.1 vs. uniprot
Match: A0A060STY7_PYCCI (Uncharacterized protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060STY7_PYCCI) HSP 1 Score: 108 bits (269), Expect = 1.040e-24 Identity = 61/138 (44.20%), Postives = 83/138 (60.14%), Query Frame = 2
Query: 20 LELVGYSDANLAGCLDSGRSTTGSLFLLAGGVVVFSSRLQHSVARSTMESEYMALFDVAQEAEQLRTLLAHLGVEQTAPTVIHEDNTAALAVAMAAGHTRQSRHIRIRYHVTRELVAAGVIVVEQVSTADQLADGLTK 433
LE +GYSDA+ A LD +S G +FLL G + +SSR Q +VA+S+ME+EYMA+ A E LR LL LG + PT ++ DN +A+A A ++HI I YH RE +A+ +VV + D LAD LTK
Sbjct: 101 LEPLGYSDADWANDLDDRKSIAGQVFLLGGAPITWSSRKQRTVAKSSMEAEYMAMSAAASEIAWLRALLTELGFPPSGPTPLYVDNQSAIASANVQTSHACTKHIDIHYHFIRERIASNEVVVNHCPSEDNLADALTK 238
BLAST of mRNA_P-wetherbeei_contig14727.1.1 vs. uniprot
Match: A0A225V6X1_9STRA (Polyprotein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V6X1_9STRA) HSP 1 Score: 110 bits (274), Expect = 1.660e-24 Identity = 61/133 (45.86%), Postives = 85/133 (63.91%), Query Frame = 2
Query: 35 YSDANLAGCLDSGRSTTGSLFLLAGGVVVFSSRLQHSVARSTMESEYMALFDVAQEAEQLRTLLAHLGVEQTAPTVIHEDNTAALAVAMAAGHTRQSRHIRIRYHVTRELVAAGVIVVEQVSTADQLADGLTK 433
+ D N G L S RST+G L L+ G V+F ++ Q +VA S+ ESEYMAL AQEA LR LL L ++ T I+ DN AA+A+A AG+ +++HI +RYH RE V G++ +E + +A QLAD +TK
Sbjct: 221 FVDVNWGGDLKSRRSTSGVLVLMCGWPVIFKAKRQRTVALSSAESEYMALSLAAQEAMWLRNLLGELALDDLPSTTINIDNKAAIALAEQAGYQSRAKHIALRYHFAREAVEEGILTLEYIPSATQLADFMTK 353 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14727.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14727.1.1 >prot_P-wetherbeei_contig14727.1.1 ID=prot_P-wetherbeei_contig14727.1.1|Name=mRNA_P-wetherbeei_contig14727.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=117bp MESEYMALFDVAQEAEQLRTLLAHLGVEQTAPTVIHEDNTAALAVAMAAGback to top mRNA from alignment at P-wetherbeei_contig14727:339..1619- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14727.1.1 ID=mRNA_P-wetherbeei_contig14727.1.1|Name=mRNA_P-wetherbeei_contig14727.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1281bp|location=Sequence derived from alignment at P-wetherbeei_contig14727:339..1619- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14727:339..1619- >mRNA_P-wetherbeei_contig14727.1.1 ID=mRNA_P-wetherbeei_contig14727.1.1|Name=mRNA_P-wetherbeei_contig14727.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=351bp|location=Sequence derived from alignment at P-wetherbeei_contig14727:339..1619- (Phaeothamnion wetherbeei SAG_119_79)back to top |