mRNA_P-wetherbeei_contig14707.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14707.2.1
Unique NamemRNA_P-wetherbeei_contig14707.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14707.2.1 vs. uniprot
Match: A0A1G8AX50_9BACT (Peroxiredoxin n=2 Tax=Dyadobacter soli TaxID=659014 RepID=A0A1G8AX50_9BACT)

HSP 1 Score: 353 bits (905), Expect = 2.850e-118
Identity = 177/270 (65.56%), Postives = 218/270 (80.74%), Query Frame = 1
Query:    1 AMRCIFLLTMLLSTRLAYAQGDAYTIQGKLANTKSKKIFLYIADIITGTSRVDSTEINGGTFTFRGNAQAPLKAILFSTPDNNRLDFFLESGKMRVESKDSLHNATVNAGKLNADFVALKTITDAIEADMRKYNQAMQAAMKTSPEKKQDVEFQKNWDLKRKSSYEQLMNAYRDFAKSNPDNVASVFAIANVGGSKTDLAVVKPLFEGLSESVRSSALGKSFANKIDKLAQVSIGALAPEFTQADTAGRAVSLKDFRGKYVLIDFWASWC 810
            AMR  +LL  +L +    AQ  A+TI+GKL + +S K+  YIADII+GT R DS ++ GG FTF+GN  AP+KAIL+S  DN+RLDFF+E GK+RVESKDSL+NA V+AGKLNADF  L+ ITD IE D RKY+QAM+AAM  SPEKKQDV+FQK+W+ KRK+S E+L NAYR+FA++NPDN ASVFA+A++ G + DLA +K LFE L E  R+SALGK++A KIDKL +V IGA+AP FTQADTAG+AVSLKDFRGKYVLIDFWASWC
Sbjct:   19 AMRYTYLLITMLLSSFVNAQNGAFTIEGKLGSPQSGKVLFYIADIISGTVRADSADVKGGRFTFKGNTPAPMKAILYSLADNSRLDFFVEQGKIRVESKDSLNNALVSAGKLNADFAVLRKITDVIENDRRKYDQAMKAAMDASPEKKQDVQFQKDWERKRKASQEELTNAYREFAQNNPDNTASVFAVASITGQENDLAQMKSLFERLGEPARNSALGKTYAAKIDKLERVGIGAIAPAFTQADTAGKAVSLKDFRGKYVLIDFWASWC 288          
BLAST of mRNA_P-wetherbeei_contig14707.2.1 vs. uniprot
Match: UPI00037D701E (AhpC/TSA family protein n=2 Tax=Dyadobacter beijingensis TaxID=365489 RepID=UPI00037D701E)

HSP 1 Score: 347 bits (891), Expect = 1.830e-116
Identity = 182/269 (67.66%), Postives = 217/269 (80.67%), Query Frame = 1
Query:    4 MRCIFLLTMLLSTRLAYAQGDAYTIQGKLANTKSKKIFLYIADIITGTSRVDSTEINGGTFTFRGNAQAPLKAILFSTPDNNRLDFFLESGKMRVESKDSLHNATVNAGKLNADFVALKTITDAIEADMRKYNQAMQAAMKTSPEKKQDVEFQKNWDLKRKSSYEQLMNAYRDFAKSNPDNVASVFAIANVGGSKTDLAVVKPLFEGLSESVRSSALGKSFANKIDKLAQVSIGALAPEFTQADTAGRAVSLKDFRGKYVLIDFWASWC 810
            MR   LLT++L + +A AQ DA+ I GKL  T++ KI LYIAD+IT T RVDST +  G FTF+G+A  PLKAILFS PDNNRLDFF+E GKM VESKDSLH A V+AGKLNAD+VALK ITD I+ADMR+YN+AMQAA+  SPEK +D EFQK W+ KR+S   QL  A  DFA+S+PDN+A+V+AIANV   +TDLAVVKPLF GLSE+VR+S LGK++  KI KL  +++GALAPEFTQADTAGR VSLKDFRGKYVL+DFWASWC
Sbjct:    1 MRYTCLLTIMLLSHVANAQNDAFVINGKLLYTRADKIHLYIADVITNTMRVDSTVVRDGIFTFKGHAPTPLKAILFSFPDNNRLDFFVEPGKMSVESKDSLHAAVVHAGKLNADYVALKAITDVIDADMRQYNKAMQAAVAASPEKAKDAEFQKKWNEKRESVTGQLAKANLDFAQSHPDNIAAVYAIANVS-QQTDLAVVKPLFMGLSETVRNSPLGKTYGAKIAKLEGLNVGALAPEFTQADTAGRNVSLKDFRGKYVLVDFWASWC 268          
BLAST of mRNA_P-wetherbeei_contig14707.2.1 vs. uniprot
Match: UPI001FD066BC (AhpC/TSA family protein n=1 Tax=Dyadobacter sp. U1 TaxID=2910158 RepID=UPI001FD066BC)

HSP 1 Score: 338 bits (867), Expect = 8.810e-113
Identity = 165/264 (62.50%), Postives = 214/264 (81.06%), Query Frame = 1
Query:   19 LLTMLLSTRLAYAQGDAYTIQGKLANTKSKKIFLYIADIITGTSRVDSTEINGGTFTFRGNAQAPLKAILFSTPDNNRLDFFLESGKMRVESKDSLHNATVNAGKLNADFVALKTITDAIEADMRKYNQAMQAAMKTSPEKKQDVEFQKNWDLKRKSSYEQLMNAYRDFAKSNPDNVASVFAIANVGGSKTDLAVVKPLFEGLSESVRSSALGKSFANKIDKLAQVSIGALAPEFTQADTAGRAVSLKDFRGKYVLIDFWASWC 810
            LL ++L   LA AQG ++TI+GKLA++KS KI+LYIADIITGTSR DST I+ G+F F+G  Q PLKAILFS PD+NRLDF++E+G +++ESKDSLHNA    GKLNADF+ L+ +TD ++  MR +N+ MQA +  SP+K+ DV+FQ+ WD KR+SS  Q   A  +F KSNPDN+AS++A+A++ GSK +LAV++PLF GL+E VR+S LGK +  K++KL+QVS+GALAPEFTQ DTAGRAV+LKDFRGKYVLIDFWASWC
Sbjct:    6 LLYLMLLPALAAAQGKSFTIKGKLADSKSTKIYLYIADIITGTSRSDSTTIDKGSFVFKGELQTPLKAILFSVPDHNRLDFYIEAGTIQIESKDSLHNALARGGKLNADFIELRRVTDPLDEQMRSFNKMMQAQLAASPQKETDVDFQRQWDAKRRSSIVQHQEANLNFVKSNPDNLASIYALASLAGSKPNLAVIRPLFLGLNEPVRNSPLGKLYGQKLEKLSQVSVGALAPEFTQTDTAGRAVALKDFRGKYVLIDFWASWC 269          
BLAST of mRNA_P-wetherbeei_contig14707.2.1 vs. uniprot
Match: UPI001F35F4D5 (AhpC/TSA family protein n=1 Tax=Dyadobacter sp. CY312 TaxID=2907303 RepID=UPI001F35F4D5)

HSP 1 Score: 230 bits (586), Expect = 2.360e-70
Identity = 118/251 (47.01%), Postives = 167/251 (66.53%), Query Frame = 1
Query:   58 QGDAYTIQGKLANTKSKKIFLYIADIITGTSRVDSTEINGGTFTFRGNAQAPLKAILFSTPDNNRLDFFLESGKMRVESKDSLHNATVNAGKLNADFVALKTITDAIEADMRKYNQAMQAAMKTSPEKKQDVEFQKNWDLKRKSSYEQLMNAYRDFAKSNPDNVASVFAIANVGGSKTDLAVVKPLFEGLSESVRSSALGKSFANKIDKLAQVSIGALAPEFTQADTAGRAVSLKDFRGKYVLIDFWASWC 810
            Q   Y I G++ + K+ K+FL++ADIIT T+  DS E+  G F F G   APLKAILF+  +N+RL FF+E G   V S DSL NA + AG++N DFV L+ +TDA++A  RK +   +A +   PEK++D EF    +L+  S   +    Y  FA+   +N+A+++A+A+V G+KTD+  ++P F  +SESVR S  G  +A K+  L+++ IG  AP FTQ DTAG AV+LKDF+GKYVL+DFWASWC
Sbjct:   20 QTKPYKIVGQINDAKAIKVFLFVADIITNTNMTDSAEVVNGHFEFIGKVGAPLKAILFAYHNNSRLHFFVEQGTTIVNSADSLDNAQITAGRINKDFVELRRLTDAVDARRRKASARHEATLANYPEKEKDQEFMAKRNLESDSFVTEKNRIYETFARDRTNNMAAIYALASVAGTKTDVYAIRPQFARMSESVRKSPYGLIYAEKLRMLSRLVIGNQAPAFTQPDTAGNAVALKDFKGKYVLLDFWASWC 270          
BLAST of mRNA_P-wetherbeei_contig14707.2.1 vs. uniprot
Match: UPI001F358321 (AhpC/TSA family protein n=1 Tax=Dyadobacter sp. CY323 TaxID=2907302 RepID=UPI001F358321)

HSP 1 Score: 229 bits (584), Expect = 5.430e-70
Identity = 112/256 (43.75%), Postives = 168/256 (65.62%), Query Frame = 1
Query:   46 LAYAQGDAYTIQGKLANTKSKKIFLYIADIITGTSRVDSTEING-GTFTFRGNAQAPLKAILFSTPDNNRLDFFLESGKMRVESKDSLHNATVNAGKLNADFVALKTITDAIEADMRKYNQAMQAAMKTSPEKKQDVEFQKNWDLKRKSSYEQLMNAYRDFAKSNPDNVASVFAIANVGGSKTDLAVVKPLFEGLSESVRSSALGKSFANKIDKLAQVSIGALAPEFTQADTAGRAVSLKDFRGKYVLIDFWASWC 810
            + +AQG +Y + GKL  +++K +FLY+ +  TG  ++DS  ++  GT+TF+G+ + P KA+ ++TPD NR++ ++E G + V SKDSL NA V  G +N DF  L+ +   +EA     N+  +AAM  SPEK++D  F++ W  K  +   +L   YR F K  PDN+ ++ A+  + GS  +LA V  +F GL E  R+S +GK++A ++  L  V IGA+AP+FTQ DT G+ VSLKD+RGKYVL+DFWASWC
Sbjct:   16 MLHAQGKSYVVNGKLGPSRAKMVFLYLPNPTTGAVKLDSVPLSSDGTYTFKGSVEVPFKAVSYTTPDYNRIELYIEPGYIEVISKDSLINAVVTGGPVNKDFNELRPLIKPVEAKGMAINKEARAAMAASPEKEKDKAFREEWGKKINAVGAELKTVYRKFIKEKPDNLITIDALQFIVGSNPELAEVSNMFNGLGEKARNSEMGKAYAKELAALKSVGIGAMAPDFTQPDTDGKPVSLKDYRGKYVLVDFWASWC 271          
BLAST of mRNA_P-wetherbeei_contig14707.2.1 vs. uniprot
Match: A0A5R9KJH7_9BACT (AhpC/TSA family protein n=1 Tax=Dyadobacter sediminis TaxID=1493691 RepID=A0A5R9KJH7_9BACT)

HSP 1 Score: 196 bits (498), Expect = 4.500e-57
Identity = 109/274 (39.78%), Postives = 156/274 (56.93%), Query Frame = 1
Query:    4 MRCIFLLTML----LSTRLAYAQGDAYTIQGKL-ANTKSKKIFLYIADIITGTSRVDSTEINGGTFTFRGNAQAPLKAILFSTPDNNRLDFFLESGKMRVESKDSLHNATVNAGKLNADFVALKTITDAIEADMRKYNQAMQAAMKTSPEKKQDVEFQKNWDLKRKSSYEQLMNAYRDFAKSNPDNVASVFAIANVGGSKTDLAVVKPLFEGLSESVRSSALGKSFANKIDKLAQVSIGALAPEFTQADTAGRAVSLKDFRGKYVLIDFWASWC 810
            ++C+ LL  L    +   L  AQG  + I+ K+    K  K+ L+  D    +   DS E+  G F FRGN + P KAIL++ PD N L+ F+ESG + ++S DSL NA V AG LN DF  L+ +   +     +       A++  PE      F+++W+ K++ +  +    Y+DF    P+++ S+ AI + GG   D   +  LFE L+ESVR+S  GK +   + KL+Q SIG LAP FTQ DT G+ VSL DFRGKYV +DFWASWC
Sbjct:    6 LKCLILLANLFIAAILPTLVLAQGYPFIIKAKINPQKKQSKVMLWYPDPANVSGVKDSAEVKNGEFEFRGNIKFPGKAILYTMPDYNDLELFIESGTILIQSSDSLANAVVTAGPLNKDFAKLQKMLAPVNKKRTEIYTDYSKALRALPENADKKVFEESWEQKKEWARSERKKIYQDFITRMPNSLVSIEAIQSSGGFTPDFKELTTLFESLTESVRNSPSGKEYQKVLSKLSQTSIGTLAPNFTQKDTTGKLVSLTDFRGKYVFLDFWASWC 279          
BLAST of mRNA_P-wetherbeei_contig14707.2.1 vs. uniprot
Match: A0A556MKY3_9SPHI (AhpC/TSA family protein n=1 Tax=Mucilaginibacter corticis TaxID=2597670 RepID=A0A556MKY3_9SPHI)

HSP 1 Score: 187 bits (476), Expect = 8.100e-54
Identity = 111/274 (40.51%), Postives = 166/274 (60.58%), Query Frame = 1
Query:   25 TMLLSTRLAYAQGDAYTIQGKLAN--TKSKKIFLYIADIITGTSRVDSTEINGGTFTFRGNAQAPLKAILF--------STPDNNRLDFFLESGKMRVESKDSLHNATVNAGKLNADFVALKTITDAIEADMRKYNQAMQAAMKTSPEKKQDVEFQKNWDLKRKSSY--EQLMNAYRDFAKSNPDNVASVFAIANVGGSKTDLAVVKPLFEGLSESVRSSALGKSFANKIDKLAQVSIGALAPEFTQADTAGRAVSLKDFRGKYVLIDFWASWC 810
            T ++   +  AQ  +YT+ GK+A     +K   +Y  +    T   DST I  G F F+G   AP  A L          + D   ++ +LE GK+ V S DS++NA V  G +NAD   LKT   ++ A M   N+  QAA   SPE+++  EF  N D++++S+   ++    Y +F K+NP++V S+FA+ N  GS  D+A V+P++  LS SVRS+ +G  +A ++ KL + ++GA+AP+FTQADTAG+AVSL D++GKYVL+DFWASWC
Sbjct:   12 TAIIFPSVLLAQSSSYTLNGKVAQLPATAKAYLMYSNETARQT---DSTTIVNGAFAFKGTLSAPKSAYLIINKKGTGIRSNDIGYIELYLEPGKISVVSPDSINNAKVTGGPVNADNAKLKTALTSVTAKMDALNKDYQAA---SPEQRKTKEF--NDDIEKRSNLIEKEQKEVYLEFIKANPNSVMSLFALKNYAGSVPDVADVEPVYNSLSASVRSTKMGVDYAAELTKLKKTAVGAVAPDFTQADTAGKAVSLHDYKGKYVLVDFWASWC 277          
BLAST of mRNA_P-wetherbeei_contig14707.2.1 vs. uniprot
Match: A0A7Y0AEA5_9BACT (AhpC/TSA family protein n=1 Tax=Hymenobacter polaris TaxID=2682546 RepID=A0A7Y0AEA5_9BACT)

HSP 1 Score: 187 bits (475), Expect = 1.420e-53
Identity = 121/283 (42.76%), Postives = 171/283 (60.42%), Query Frame = 1
Query:    7 RCIFLLTMLLSTRLAYAQGDAYTIQGKLANTKSKKIFLYIADIITGTS---RVDSTEINGGTFTFRGNAQAPLKA-ILFSTPDN----NR------LDFFLESGKMRVESKDSLHNATVNAGKLNADFVALKTITDAIEADMRKYNQAMQAAMKTSPEKKQDVEFQKNWDLKRKSSYEQLMNAY-RDFAKSNPDNVASVFAIANVGGSKTDLAVVKPLFEGLSESVRSSALGKSFANKIDKLAQVSIGALAPEFTQADTAGRAVSLKDFRGKYVLIDFWASWC 810
            R + L   L +  L +AQG AYT+QG+L    SKK+    A I+  +    ++DS  +N G FTF+GN  AP+KA +L + P +    NR      +  FLE G  RV S DSL +AT+    LN D   LK +T    A M       +AA   +PEK++D  F+ + D KR    E   N   + F +S+P+++ S++A+ ++GG   D AVV P+FEGL+ SVR SA G+ +A K+DK+ +++IGA+AP+FTQAD  G+ V L DFRGKYVL+DFWASWC
Sbjct:    8 RALSLALSLGAPTLLFAQGGAYTVQGQL----SKKLPTGKAYILMPSPTGFQLDSAAVNKGRFTFKGNVTAPVKAQLLVAQPGHPFFLNRPSHYQPITIFLEPGTARVLSPDSLAHATIGGTALNVDQQRLKQLTQLTTARMDAVMAEWRAA---TPEKRKDKAFEDSID-KRNDEAEAANNVLLKQFIQSHPNSLVSLYALEDLGGFAPDAAVVGPIFEGLTPSVRQSARGQRYATKLDKIRKLAIGAVAPDFTQADATGKQVKLSDFRGKYVLVDFWASWC 282          
BLAST of mRNA_P-wetherbeei_contig14707.2.1 vs. uniprot
Match: UPI001E4AB353 (AhpC/TSA family protein n=1 Tax=Mucilaginibacter sp. UR6-11 TaxID=1435644 RepID=UPI001E4AB353)

HSP 1 Score: 181 bits (460), Expect = 1.940e-51
Identity = 107/277 (38.63%), Postives = 169/277 (61.01%), Query Frame = 1
Query:   16 FLLTMLLS---TRLAYAQGDAYTIQGKLANTKSK-KIFLYIADIITGTSRVDSTEINGGTFTFRGNAQAPLKAILFS--------TPDNNRLDFFLESGKMRVESKDSLHNATVNAGKLNADFVALKTITDAIEADMRKYNQAMQAAMKTSPEKKQDVEFQKNWDLKRKSSYEQLMNAYRDFAKSNPDNVASVFAIANVGGSKTDLAVVKPLFEGLSESVRSSALGKSFANKIDKLAQVSIGALAPEFTQADTAGRAVSLKDFRGKYVLIDFWASWC 810
            FLL  ++S   + ++ AQ  AYT+ GK+A+   + K +L  +D       +DST IN GTF F G+   P  A L          + D   L+F+LESG++ V S DS+ NA +  G +N D + L+       A+M+   + +QAA   S EK++  EF +    + KS  ++  + Y  F K+NP++V S+FA+ N  G+  D+  ++P ++ LS  VRS+ +G ++A++I+++ + ++G++AP+FTQADTAG AVSL DF+GKYVL+DFWASWC
Sbjct:    6 FLLMAVISVVMSSVSIAQTVAYTLSGKIAHLPPQAKAYLMYSD--EAGRHIDSTIINDGTFNFAGSLSEPAHAFLMVNKKGTGLYSKDIEYLEFYLESGRITVFSTDSVGNAKIAGGPINTDNIGLRAALAPSNAEMQAVERDLQAA---SSEKQKSKEFSEEIAKREKSIIKKQKDIYLGFIKANPNSVLSLFALRNAAGAVPDVNEIEPFYQLLSARVRSTKIGVNYASEIERMKKTAMGSIAPDFTQADTAGTAVSLHDFKGKYVLLDFWASWC 277          
BLAST of mRNA_P-wetherbeei_contig14707.2.1 vs. uniprot
Match: A0A1M7PTZ4_9SPHI (Peroxiredoxin n=1 Tax=Mucilaginibacter sp. OK098 TaxID=1855297 RepID=A0A1M7PTZ4_9SPHI)

HSP 1 Score: 181 bits (458), Expect = 3.840e-51
Identity = 103/271 (38.01%), Postives = 157/271 (57.93%), Query Frame = 1
Query:   28 MLLSTRLAYAQGDAYTIQGKLA--NTKSKKIFLYIADIITGTSRVDSTEINGGTFTFRGNAQAPLKAILF--------STPDNNRLDFFLESGKMRVESKDSLHNATVNAGKLNADFVALKTITDAIEADMRKYNQAMQAAMKTSPEKKQDVEFQKNWDLKRKSSYEQLMNAYRDFAKSNPDNVASVFAIANVGGSKTDLAVVKPLFEGLSESVRSSALGKSFANKIDKLAQVSIGALAPEFTQADTAGRAVSLKDFRGKYVLIDFWASWC 810
            ++++  +  AQ   YT+ GK+   +  +K   +Y  D      + DST IN G FTF G    P  A L          + D   +D +LE+G + V S DS++NA +  G +NAD   LK   +     M+  N+  QAA   SPEK++  EF  + + +  +  ++    Y  F K+NP+++ S+FA+ N  GS  D+  V+P++  LS SVRS+ +G  +A  I+K+ + ++GA+AP+FTQADTAG A+SL DF+GKYVL+DFWASWC
Sbjct:   13 VIITPSVLLAQTATYTLNGKVGQLSAPAKAYLMYSND---AGRQTDSTTINNGVFTFSGPLSEPKSAYLIVNKKGTGIRSNDVGYIDLYLEAGNISVVSPDSINNAKITGGSINADNTKLKIALEPASEKMKALNKDYQAA---SPEKRKTKEFSDDIEKRSDAIEKEQKAVYLAFIKANPNSLMSMFALKNYAGSVPDVTEVEPVYNSLSASVRSTKMGVDYAADIEKMKKTAVGAVAPDFTQADTAGTAISLHDFKGKYVLVDFWASWC 277          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14707.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1G8AX50_9BACT2.850e-11865.56Peroxiredoxin n=2 Tax=Dyadobacter soli TaxID=65901... [more]
UPI00037D701E1.830e-11667.66AhpC/TSA family protein n=2 Tax=Dyadobacter beijin... [more]
UPI001FD066BC8.810e-11362.50AhpC/TSA family protein n=1 Tax=Dyadobacter sp. U1... [more]
UPI001F35F4D52.360e-7047.01AhpC/TSA family protein n=1 Tax=Dyadobacter sp. CY... [more]
UPI001F3583215.430e-7043.75AhpC/TSA family protein n=1 Tax=Dyadobacter sp. CY... [more]
A0A5R9KJH7_9BACT4.500e-5739.78AhpC/TSA family protein n=1 Tax=Dyadobacter sedimi... [more]
A0A556MKY3_9SPHI8.100e-5440.51AhpC/TSA family protein n=1 Tax=Mucilaginibacter c... [more]
A0A7Y0AEA5_9BACT1.420e-5342.76AhpC/TSA family protein n=1 Tax=Hymenobacter polar... [more]
UPI001E4AB3531.940e-5138.63AhpC/TSA family protein n=1 Tax=Mucilaginibacter s... [more]
A0A1M7PTZ4_9SPHI3.840e-5138.01Peroxiredoxin n=1 Tax=Mucilaginibacter sp. OK098 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14707contigP-wetherbeei_contig14707:877..1686 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1089547.KB913013_gene3484
PFAMsAhpC-TSA,DUF4369,Thioredoxin_8
Model size810
Max annot lvl976|Bacteroidetes
Hectar predicted targeting categorysignal peptide
Exons1
Evalue3.11e-50
EggNOG OGsCOG1225@1|root,COG1225@2|Bacteria,4P08Q@976|Bacteroidetes,47YMU@768503|Cytophagia
DescriptionDomain of unknown function (DUF4369)
Cds size807
COG categoryO
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186031.1708498-UTR-P-wetherbeei_contig14707:876..8791683186031.1708498-UTR-P-wetherbeei_contig14707:876..879Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig14707 877..879 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186031.1802652-CDS-P-wetherbeei_contig14707:879..16861683186031.1802652-CDS-P-wetherbeei_contig14707:879..1686Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14707 880..1686 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14707.2.1prot_P-wetherbeei_contig14707.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14707 880..1686 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14707.2.1

>prot_P-wetherbeei_contig14707.2.1 ID=prot_P-wetherbeei_contig14707.2.1|Name=mRNA_P-wetherbeei_contig14707.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=269bp
MRCIFLLTMLLSTRLAYAQGDAYTIQGKLANTKSKKIFLYIADIITGTSR
VDSTEINGGTFTFRGNAQAPLKAILFSTPDNNRLDFFLESGKMRVESKDS
LHNATVNAGKLNADFVALKTITDAIEADMRKYNQAMQAAMKTSPEKKQDV
EFQKNWDLKRKSSYEQLMNAYRDFAKSNPDNVASVFAIANVGGSKTDLAV
VKPLFEGLSESVRSSALGKSFANKIDKLAQVSIGALAPEFTQADTAGRAV
SLKDFRGKYVLIDFWASWC
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mRNA from alignment at P-wetherbeei_contig14707:877..1686+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14707.2.1 ID=mRNA_P-wetherbeei_contig14707.2.1|Name=mRNA_P-wetherbeei_contig14707.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=810bp|location=Sequence derived from alignment at P-wetherbeei_contig14707:877..1686+ (Phaeothamnion wetherbeei SAG_119_79)
GCCATGAGATGCATATTCCTACTGACGATGTTGCTGTCGACACGCCTCGC GTATGCGCAAGGCGATGCGTATACCATACAGGGTAAGCTGGCAAACACTA AATCTAAGAAAATCTTCCTCTACATTGCCGATATCATAACCGGGACTAGC CGCGTCGATTCGACAGAAATAAATGGGGGAACGTTCACATTCCGTGGTAA TGCCCAAGCGCCCCTAAAAGCGATCCTGTTTTCAACCCCCGACAACAACC GCCTTGACTTTTTCCTCGAATCCGGCAAAATGAGGGTGGAAAGCAAAGAT TCGTTGCATAACGCCACCGTGAATGCGGGAAAACTGAATGCCGACTTTGT TGCCTTGAAAACGATAACGGATGCCATTGAGGCGGACATGCGCAAATACA ACCAGGCTATGCAGGCAGCCATGAAGACTTCCCCGGAGAAAAAACAGGAC GTGGAATTTCAAAAGAACTGGGACCTGAAAAGGAAATCTTCGTACGAACA GCTGATGAATGCGTATCGCGATTTTGCAAAAAGCAATCCGGATAACGTAG CATCCGTTTTCGCGATCGCAAACGTCGGCGGGTCAAAGACCGATTTGGCT GTTGTCAAGCCGCTTTTTGAGGGTTTGAGCGAGTCGGTCCGTAGTAGCGC CCTGGGTAAGAGTTTCGCTAATAAGATCGATAAACTCGCGCAAGTGAGCA TAGGCGCACTTGCCCCTGAGTTTACACAAGCCGACACGGCTGGTAGGGCC GTGTCGTTAAAGGATTTCCGGGGAAAATATGTACTGATCGATTTTTGGGC AAGCTGGTGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14707:877..1686+

>mRNA_P-wetherbeei_contig14707.2.1 ID=mRNA_P-wetherbeei_contig14707.2.1|Name=mRNA_P-wetherbeei_contig14707.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=807bp|location=Sequence derived from alignment at P-wetherbeei_contig14707:877..1686+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGATGCATATTCCTACTGACGATGTTGCTGTCGACACGCCTCGCGTA
TGCGCAAGGCGATGCGTATACCATACAGGGTAAGCTGGCAAACACTAAAT
CTAAGAAAATCTTCCTCTACATTGCCGATATCATAACCGGGACTAGCCGC
GTCGATTCGACAGAAATAAATGGGGGAACGTTCACATTCCGTGGTAATGC
CCAAGCGCCCCTAAAAGCGATCCTGTTTTCAACCCCCGACAACAACCGCC
TTGACTTTTTCCTCGAATCCGGCAAAATGAGGGTGGAAAGCAAAGATTCG
TTGCATAACGCCACCGTGAATGCGGGAAAACTGAATGCCGACTTTGTTGC
CTTGAAAACGATAACGGATGCCATTGAGGCGGACATGCGCAAATACAACC
AGGCTATGCAGGCAGCCATGAAGACTTCCCCGGAGAAAAAACAGGACGTG
GAATTTCAAAAGAACTGGGACCTGAAAAGGAAATCTTCGTACGAACAGCT
GATGAATGCGTATCGCGATTTTGCAAAAAGCAATCCGGATAACGTAGCAT
CCGTTTTCGCGATCGCAAACGTCGGCGGGTCAAAGACCGATTTGGCTGTT
GTCAAGCCGCTTTTTGAGGGTTTGAGCGAGTCGGTCCGTAGTAGCGCCCT
GGGTAAGAGTTTCGCTAATAAGATCGATAAACTCGCGCAAGTGAGCATAG
GCGCACTTGCCCCTGAGTTTACACAAGCCGACACGGCTGGTAGGGCCGTG
TCGTTAAAGGATTTCCGGGGAAAATATGTACTGATCGATTTTTGGGCAAG
CTGGTGC
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