mRNA_P-wetherbeei_contig14680.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14680.1.1 vs. uniprot
Match: A0A250WT19_9CHLO (U-box domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WT19_9CHLO) HSP 1 Score: 169 bits (429), Expect = 1.130e-45 Identity = 112/258 (43.41%), Postives = 151/258 (58.53%), Query Frame = 2
Query: 77 RPQVTKP-------QETIDAIVRASDYPLSIVLVGVGDGPWGMMRKFDDGLPERRFDNYQFVEYNRIVRRH---PNNAGPAFACHCLMEIPDQFKAIRKLNLLNAPLRPPVHRPPGLARVLDPPPGSLTAAGTAPLP-VAPFVEAAVVPPS--APSFPAALPNGSAPCAASTGSGS-----SGGNGSAGRRNPDAVPNEFLCPLTLSMMEDPVIVSDGHTYERCAIEQWLAEHRTSPMSNEPLASGGVVPNRALRSAI 796
RP T P +ETIDAIV AS+ PLSIV+VGVGDGPW +MR+FDD +P+RR+DN+QFV + I + P FA LMEIP+Q+K I+KL LL R G+ +V+DPP G ++ G A P VAP +A V PS A + P+ LP + GS S + G+ P+ P F+CP+T +M+DPV+ +DG++Y+R +I QWL H TSPM+N L + PN ALRS+I
Sbjct: 185 RPTDTPPNYCSKQERETIDAIVNASELPLSIVMVGVGDGPWDVMREFDDRIPQRRWDNFQFVNFTEIAAAYSSMPQRMETIFALRTLMEIPEQYKIIQKLGLLGRRTA----RIAGI-KVMDPP-GPVSGYGAAVQPSVAPPQQANFVNPSPVAAAGPSLLPEPGNTSIQNPGSASMRALFTKGSSMLRESTPEGPPPMFICPITQEIMKDPVMAADGYSYDRSSITQWLQTHHTSPMTNTQLPHKTLTPNHALRSSI 436
BLAST of mRNA_P-wetherbeei_contig14680.1.1 vs. uniprot
Match: D7FQB4_ECTSI (U-box domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQB4_ECTSI) HSP 1 Score: 160 bits (406), Expect = 2.210e-42 Identity = 100/244 (40.98%), Postives = 132/244 (54.10%), Query Frame = 2
Query: 83 QVTKPQETIDAIVRASDYPLSIVLVGVGDGPWGMMRKFDDGLPERRFDNYQFVEYNRIVRRHPNNAGPAFACHCLMEIPDQFKAIRKLNLLNAPLRPPVHRPPGLARVLDPPPGSLTAAGTAPLPVAPFVEAAVVPPSAPSFPAA--LPNGSAPCAASTGSGSSGGNGSAGRRNPDAVPNEFLCPLTLSMMEDPVIVSDGHTYERCAIEQWLAEHRTSPMSNEPLASGGVVPNRALRSAIEVWR 808
QVTK ++T+ AI AS+YPLSI++VGVG+GPW R+FD+ LP RR+DN++FVE+ R+ A A L E+PDQ++AIR L ++ P G+ P VA V V SAPS + +GSAP + VP +F+CPLTL +M DPV+ DGH+YER A+E WL H TSPMSN L S VPN ALR++IE +R
Sbjct: 228 QVTKERDTVRAIQDASNYPLSIIMVGVGEGPWETCREFDNRLPGRRYDNFRFVEHRRLKY----GDAEALALSALAEVPDQYRAIRALGIMEGAGAP----------------------GSGPTSVAASVAGGGVSGSAPSMAPVNMVMSGSAPPXXXPSE----------LDEDEGVPQDFICPLTLEVMIDPVVCEDGHSYERGALEAWLRNHDTSPMSNAHLNSKMAVPNHALRNSIEAFR 435
BLAST of mRNA_P-wetherbeei_contig14680.1.1 vs. uniprot
Match: A0A8J4C8P0_9CHLO (U-box domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4C8P0_9CHLO) HSP 1 Score: 157 bits (396), Expect = 1.140e-40 Identity = 107/267 (40.07%), Postives = 142/267 (53.18%), Query Frame = 2
Query: 101 ETIDAIVRASDYPLSIVLVGVGDGPWGMMRKFDDGLPERRFDNYQFVEYNRIVRRHPNNAG---PAFACHCLMEIPDQFKAIRKLNLLN--------APLRPPVHRPPGLARVLDPP--PGSLTAAGTAPLPVAPFVEAAVVPPSAPSFPAALPNGSAPCAASTGSGSSG--------GNGSAG---------RRNPDAVPNEFLCPLTLSMMEDPVIVSDGHTYERCAIEQWLAEHRTSPMSNEPLASGG-VVPNRALRSAIEVWR 808
+TI AIV AS PLSI++VGVGDGPW +M+ FDD LPER+FDN+QFV + ++ N FA LMEIP+Q++ I++L L++ AP R P + VLDPP P ++ G+ +V + P A P +A TG G SG G G G R+ P P FLCP+T +M DPVI +DG+TYER AI QWL SPM+N P+ G ++PN ALRS+I W+
Sbjct: 218 DTIAAIVEASHLPLSIIMVGVGDGPWDLMKDFDDALPERQFDNFQFVNFTEVMASTSGNVERREALFALRALMEIPEQYQMIQRLGLMSTNSIVRARAPRRKPANP------VLDPPVPPSIMSGLGSG---------GSVPKQLTKTTPIAEPLSAAAVGVITGGGKSGAQAGGDGLGVGFGGSTRVGTTDDRKGPQPDPM-FLCPITQDVMTDPVIATDGYTYERSAIMQWLKNKTISPMTNAPMPGGTTLIPNHALRSSILQWK 468
BLAST of mRNA_P-wetherbeei_contig14680.1.1 vs. uniprot
Match: A0A8J9RJQ7_9CHLO (Probable E3 ubiquitin-protein ligase RGLG2 at N-terminal half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RJQ7_9CHLO) HSP 1 Score: 157 bits (397), Expect = 1.550e-40 Identity = 115/316 (36.39%), Postives = 153/316 (48.42%), Query Frame = 2
Query: 104 TIDAIVRASDYPLSIVLVGVGDGPWGMMRKFDDGLPERRFDNYQFVEYNRIVR----RHPNNAGPAFACHCLMEIPDQFKAIRKLNLLNAPLRPPVHRPPGLARV----LDPPPGSLTA---AGTAP----------------------------------------------------------------LPVAPF------VEAAVVPPSAPSFPAALPNGSAPCAASTGSGSSGGNGSAGRRNPDAVPNEFLCPLTLSMMEDPVIVSDGHTYERCAIEQWLAEHRTSPMSNEPLASGGVVPNRALRSAIEVWR 808
T+DAIV AS++PLSIV+VGVGDGP+ MMR+FDD LP RRFDN+QFV+ +R++R + P A FA LMEIPDQ++ + +L L+ P + +AR+ L PPP L A A TAP +P AP+ V + PPSA A P+ +AP G SS R + D FLCP+T +M+DPV+ +DG+TYER AIE WL H TSP+SNE L + ++ N +LRSAI W+
Sbjct: 201 TMDAIVMASNFPLSIVMVGVGDGPFDMMREFDDALPTRRFDNFQFVDMSRVMRETRGQPPEKAEALFALRALMEIPDQYRTLLRLGLIGGAPNPSI-----MARLMPPALGPPPAVLAAERVAATAPSFPGSPIATNGSFGNLSFVPHSQAQNVPHPHLHAGGPLGAGPAASSSHEDLIEERLRHELQQQQVPTAPYPSLSYTVGISTPPPSA----YASPSVAAPADRPIGQDSSTHGVHGARLDLDEPDPMFLCPITQDVMKDPVMAADGYTYERLAIESWLENHVTSPISNEQLPNKSLIANHSLRSAILEWQ 507
BLAST of mRNA_P-wetherbeei_contig14680.1.1 vs. uniprot
Match: A0A835WNU3_9CHLO (U-box domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WNU3_9CHLO) HSP 1 Score: 153 bits (386), Expect = 5.690e-39 Identity = 106/279 (37.99%), Postives = 144/279 (51.61%), Query Frame = 2
Query: 98 QETIDAIVRASDYPLSIVLVGVGDGPWGMMRKFDDGLPERRFDNYQFVEYNRIVRRHPNNAG---PAFACHCLMEIPDQFKAIRKLNLL------------------NAPLRPPVHRPPGLARVLDPPPGSLTAAGTA--------PLPVAPFVEAAVVPPSAPSFPAALPNGSAPCAASTGSG---SSGGNG---------SAGRRNPDAVPNEFLCPLTLSMMEDPVIVSDGHTYERCAIEQWLAEHRTSPMSNEPLASGGV-VPNRALRSAIEVWR 808
Q+TIDAIV AS PLSI++VGVGDGPW +M+ FDD LPER FDN+QFV ++ ++ + FA LMEIP+Q+ AI+++ +L N PL PPV PP L P + T G A S AA P+ A ++G+G ++GG G +AG PD + F+CP+T +M+DPVI +DG+TYER AI WLA SP++N+ + G V +PN LRS+I WR
Sbjct: 232 QDTIDAIVEASSLPLSIIMVGVGDGPWDLMKDFDDALPERAFDNFQFVNFSELMSSTQGDRSRREALFALRALMEIPEQYNAIQRMGILGRTAAAQVARGRTQRRPGNPPLDPPV--PPHLMAGTASGPSTTTTCGPAGGAXXXXXXXXXXXXXXXXXXXXSGAGDAAAAPSKGTQSARTSGTGYGVAAGGGGPTGPTPMAPAAGGPVPDPM---FVCPITQDVMKDPVIATDGYTYERAAITDWLARKAVSPLTNQRMPGGNVLIPNHNLRSSIMEWR 505
BLAST of mRNA_P-wetherbeei_contig14680.1.1 vs. uniprot
Match: A0A8J4F4Y0_9CHLO (U-box domain-containing protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4F4Y0_9CHLO) HSP 1 Score: 141 bits (356), Expect = 6.070e-35 Identity = 102/295 (34.58%), Postives = 137/295 (46.44%), Query Frame = 2
Query: 98 QETIDAIVRASDYPLSIVLVGVGDGPWGMMRKFDDGLPERRFDNYQFVEYNRIVRRHPNNAG---PAFACHCLMEIPDQFKAIRKLNLLN--------APLRPPVHRPPGLARVLDPPPGSLTAAGTAPLPVAPFVEAAVVPPSAPSFPAALPNGSAPCAASTGSGSS----------------------------------------------GGNGSAGRRNPDAVPNEFLCPLTLSMMEDPVIVSDGHTYERCAIEQWLAEHRTSPMSNEPLASGG-VVPNRALRSAIEVWR 808
Q+TI AIV AS PLSI++VGVGDGPW +M+ FDD LPER+FDN+QFV + ++ N FA LMEIP+Q++ I++L L++ AP R P++ VLDPP VPPS + NG GSG+S G + R+ P + F+CP+T +M DPVI +DG+TYER AI QWL SPM+N P+ G ++PN ALRS+I W+
Sbjct: 217 QDTIAAIVEASHLPLSIIMVGVGDGPWDLMKDFDDALPERQFDNFQFVNFTDVMANSSGNLARREALFALRALMEIPEQYQMIQRLGLMSRNSIVRTRAPHRKPINP------VLDPP----------------------VPPS-------IMNG-------LGSGASVSKPPKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSTGARTAEDRKGPQP-DSMFVCPITQDVMTDPVIATDGYTYERSAIMQWLKNKTISPMTNAPMPGGTTLIPNHALRSSILQWK 468
BLAST of mRNA_P-wetherbeei_contig14680.1.1 vs. uniprot
Match: A0A835Y3U0_9CHLO (U-box domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y3U0_9CHLO) HSP 1 Score: 139 bits (350), Expect = 5.870e-34 Identity = 99/292 (33.90%), Postives = 132/292 (45.21%), Query Frame = 2
Query: 98 QETIDAIVRASDYPLSIVLVGVGDGPWGMMRKFDDGLPERRFDNYQFVEYNRIVRRHPNNAG-------PAFACHCLMEIPDQFKAIRKLNLL------------------NAPLRPPV--HRPPG---------------------------LARVLDPPPGSLTAAGTAPLPVAPFVEAAVVPPSAPSFPAALPNGSAPCAASTGSGSSGGNGSAGRRNPDAVPNEFLCPLTLSMMEDPVIVSDGHTYERCAIEQWLAEHRTSPMSNEPLASGGV-VPNRALRSAIEVWR 808
QETIDAIV AS PLSI++VGVGDGPW +M+ FDD LP+R FDN+QFV + I+ N+ G FA LME+P+Q+ AI+K ++ N PL PPV H G P + T + P + + S+ P AP A + PD + +LCP+T +M DPVI +DG+TYER AI WL SP++N+P+ G V +PN LRSAI W+
Sbjct: 222 QETIDAIVEASFLPLSIIMVGVGDGPWDLMKDFDDALPQREFDNFQFVNFTDIM----NSTGMDRQRRETVFALRALMEVPEQYSAIQKAGIMGSSSTAAANRSXXXXXRGNPPLDPPVPQHMLTGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPARNKTMSADGSRPTGGAGASGAAAQTRNSYSGGTPADPAPAAGA---------------QPDPM---YLCPITQDLMTDPVIATDGYTYERAAITDWLKRKSVSPLTNQPMPGGAVLIPNHGLRSAIMEWK 491
BLAST of mRNA_P-wetherbeei_contig14680.1.1 vs. uniprot
Match: A0A7J7PJ18_9CHLO (Copine-domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PJ18_9CHLO) HSP 1 Score: 137 bits (346), Expect = 1.510e-33 Identity = 105/275 (38.18%), Postives = 140/275 (50.91%), Query Frame = 2
Query: 80 PQVTKPQE--TIDAIVRASDYPLSIVLVGVGDGPWGMMRKFDDGLPERRFDNYQFVEYNRIVRRHPNNAG---PAFACHCLMEIPDQFKAIRKLNLLNA--PLRPPVHRPPGLARVLDPPPGSLTAAGTAPLPVAPFVEAAVVPPSAPSFPAALPNGSAPC----------AASTGSGSSGGNGS----------------AGRRNP--DAVPNE-FLCPLTLSMMEDPVIVSDGHTYERCAIEQWLAEHRTSPMSNEPLASGGVVPNRALRSAI 796
P PQE TI A+V AS PLS+V+VGVGDGPW +M+ FDD LP+R FDN+QFV + I+ R +AG FA LME+P+QF+ I++L LL PL+ P P LDPP G AA A + + C + S+ S + NGS A P D + N FLCP+T +M +PV+ +DG+TYE+ AI+ WL+ + SPM+NE L S ++PN ALRSAI
Sbjct: 189 PGQHSPQEAATIAALVEASGLPLSVVMVGVGDGPWEVMQHFDDALPQRAFDNFQFVNFTEIMARCGADAGRRQAQFALRALMEVPEQFRTIQRLQLLGRQQPLQQPCPPP------LDPP-GPAAAAAPAGYTLPQYXXXXXXXXXXXXXXXXXXXXXXRCQHKPVPAINSSISSSSRNRDTNGSNCLSSIHIQWYHHPAAAAAAVPAIDPLANPMFLCPITQDVMGEPVLAADGYTYEKHAIQDWLSRNDRSPMTNEALGSKQLLPNHALRSAI 456
BLAST of mRNA_P-wetherbeei_contig14680.1.1 vs. uniprot
Match: A0A6A4Y445_9STRA (Copine domain-containing protein (Fragment) n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4Y445_9STRA) HSP 1 Score: 129 bits (323), Expect = 2.370e-33 Identity = 60/91 (65.93%), Postives = 72/91 (79.12%), Query Frame = 2
Query: 83 QVTKPQETIDAIVRASDYPLSIVLVGVGDGPWGMMRKFDDGLPERRFDNYQFVEYNRIVRRHPNNAGPAFACHCLMEIPDQFKAIRKLNLL 355
QVT +ET DAIV AS+YP+SI++VGVGDGPW MM +FDD LP RRFDNYQFVEYN+++R + N FA LMEIPDQ+KAIR+L LL
Sbjct: 50 QVTSERETQDAIVEASNYPISIIMVGVGDGPWEMMEEFDDRLPRRRFDNYQFVEYNKVLRFNQRNPDVGFATAALMEIPDQYKAIRQLGLL 140
BLAST of mRNA_P-wetherbeei_contig14680.1.1 vs. uniprot
Match: A0A067CLK5_SAPPC (VWFA domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CLK5_SAPPC) HSP 1 Score: 131 bits (329), Expect = 1.130e-32 Identity = 59/91 (64.84%), Postives = 72/91 (79.12%), Query Frame = 2
Query: 83 QVTKPQETIDAIVRASDYPLSIVLVGVGDGPWGMMRKFDDGLPERRFDNYQFVEYNRIVRRHPNNAGPAFACHCLMEIPDQFKAIRKLNLL 355
QVT +ETIDAIV AS YP+SI++VGVGDGPWG M KFDD +P RRFDN+QFVEY +++R++P N FA LME+PDQ+K IRKL LL
Sbjct: 176 QVTNEKETIDAIVAASSYPISIIMVGVGDGPWGTMEKFDDQIPSRRFDNFQFVEYAKMLRQNPRNPEVGFATQALMEVPDQYKIIRKLGLL 266 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14680.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14680.1.1 >prot_P-wetherbeei_contig14680.1.1 ID=prot_P-wetherbeei_contig14680.1.1|Name=mRNA_P-wetherbeei_contig14680.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=274bp MDHVYVNLGCGHESLCRARAAFRPQVTKPQETIDAIVRASDYPLSIVLVGback to top mRNA from alignment at P-wetherbeei_contig14680:5..1350+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14680.1.1 ID=mRNA_P-wetherbeei_contig14680.1.1|Name=mRNA_P-wetherbeei_contig14680.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1346bp|location=Sequence derived from alignment at P-wetherbeei_contig14680:5..1350+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14680:5..1350+ >mRNA_P-wetherbeei_contig14680.1.1 ID=mRNA_P-wetherbeei_contig14680.1.1|Name=mRNA_P-wetherbeei_contig14680.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=822bp|location=Sequence derived from alignment at P-wetherbeei_contig14680:5..1350+ (Phaeothamnion wetherbeei SAG_119_79)back to top |