mRNA_P-wetherbeei_contig14665.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14665.2.1
Unique NamemRNA_P-wetherbeei_contig14665.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14665.2.1 vs. uniprot
Match: A0A539DQX5_9ACTN (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A539DQX5_9ACTN)

HSP 1 Score: 216 bits (549), Expect = 1.490e-70
Identity = 104/123 (84.55%), Postives = 115/123 (93.50%), Query Frame = 1
Query:    1 MSEKPSITIPDVDPPAELEVHDEVVGDGDEAVVGKRVVVHYAGVAWSTGKEFDASWNRGQTFDFRLGAREVIEGWDRGVAGMKVGGRRRLVIPPDLGYGARGAGGVIKGGETLVFVVDLVAVR 369
            M++KP I+IP+ +PPAELE+ DEV+GDGDEAV+GKRVVVHYAGVAWST +EFDASWNRG TFDFRLGAREVIEGWD+GVAGMKVGGRRRL IPP LGYG+RGAGG IKGGETLVFVVDLVAVR
Sbjct:    1 MADKPIISIPEGEPPAELEISDEVLGDGDEAVIGKRVVVHYAGVAWSTSREFDASWNRGDTFDFRLGAREVIEGWDKGVAGMKVGGRRRLTIPPHLGYGSRGAGGAIKGGETLVFVVDLVAVR 123          
BLAST of mRNA_P-wetherbeei_contig14665.2.1 vs. uniprot
Match: A0A7K1BC82_9ACTN (Peptidyl-prolyl cis-trans isomerase n=2 Tax=root TaxID=1 RepID=A0A7K1BC82_9ACTN)

HSP 1 Score: 213 bits (543), Expect = 1.310e-69
Identity = 105/120 (87.50%), Postives = 110/120 (91.67%), Query Frame = 1
Query:   10 KPSITIPDVDPPAELEVHDEVVGDGDEAVVGKRVVVHYAGVAWSTGKEFDASWNRGQTFDFRLGAREVIEGWDRGVAGMKVGGRRRLVIPPDLGYGARGAGGVIKGGETLVFVVDLVAVR 369
            KP ITIPD  PPAEL + DEVVGDGDEA +GKRV VHYAGVAWSTG+EFDASWNRG TFDFRLGAREVIEGWDRGVAGM+VGGRRRL IPPDLGYG+RGAGGVIKGGETLVFVVDLV VR
Sbjct:    6 KPIITIPDGAPPAELLIEDEVVGDGDEATIGKRVHVHYAGVAWSTGREFDASWNRGSTFDFRLGAREVIEGWDRGVAGMRVGGRRRLTIPPDLGYGSRGAGGVIKGGETLVFVVDLVQVR 125          
BLAST of mRNA_P-wetherbeei_contig14665.2.1 vs. uniprot
Match: A0A6I2WZI3_9ACTN (Peptidyl-prolyl cis-trans isomerase n=5 Tax=root TaxID=1 RepID=A0A6I2WZI3_9ACTN)

HSP 1 Score: 210 bits (534), Expect = 2.880e-68
Identity = 103/123 (83.74%), Postives = 110/123 (89.43%), Query Frame = 1
Query:    1 MSEKPSITIPDVDPPAELEVHDEVVGDGDEAVVGKRVVVHYAGVAWSTGKEFDASWNRGQTFDFRLGAREVIEGWDRGVAGMKVGGRRRLVIPPDLGYGARGAGGVIKGGETLVFVVDLVAVR 369
            M++KP ITIP  +PP EL + DE+VG+GDEA VGKRVVVHYAGVAWS GKEFDASWNRG TFDF LGAREVIEGWDRGV GMKVGGRRRL IPPDLGYG+RGAGG IKGGETLVFVVDLVAVR
Sbjct:    1 MADKPVITIPAGNPPGELLIEDEIVGEGDEATVGKRVVVHYAGVAWSNGKEFDASWNRGDTFDFLLGAREVIEGWDRGVKGMKVGGRRRLTIPPDLGYGSRGAGGAIKGGETLVFVVDLVAVR 123          
BLAST of mRNA_P-wetherbeei_contig14665.2.1 vs. uniprot
Match: A0A6I3F289_9ACTN (Peptidyl-prolyl cis-trans isomerase n=2 Tax=root TaxID=1 RepID=A0A6I3F289_9ACTN)

HSP 1 Score: 202 bits (515), Expect = 2.510e-65
Identity = 97/121 (80.17%), Postives = 109/121 (90.08%), Query Frame = 1
Query:    7 EKPSITIPDVDPPAELEVHDEVVGDGDEAVVGKRVVVHYAGVAWSTGKEFDASWNRGQTFDFRLGAREVIEGWDRGVAGMKVGGRRRLVIPPDLGYGARGAGGVIKGGETLVFVVDLVAVR 369
            EKP ITIP+ D P +L + DE+VGDG+EA VGKRV+VHYAGVAWSTG+EFDASW+RG TFDFRLGAREVIEGWDRGV GM+VGGRRRL IP +LGYG+RGAGG IKGGETLVFVVDLVA+R
Sbjct:    6 EKPVITIPEGDAPTDLVIEDEIVGDGEEATVGKRVIVHYAGVAWSTGREFDASWDRGSTFDFRLGAREVIEGWDRGVKGMRVGGRRRLTIPAELGYGSRGAGGAIKGGETLVFVVDLVALR 126          
BLAST of mRNA_P-wetherbeei_contig14665.2.1 vs. uniprot
Match: A0A4P5RXP7_9ACTN (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A4P5RXP7_9ACTN)

HSP 1 Score: 186 bits (471), Expect = 1.940e-58
Identity = 92/122 (75.41%), Postives = 102/122 (83.61%), Query Frame = 1
Query:    1 MSEKPSITIPDVDPPAELEVHDEVVGDGDEAVVGKRVVVHYAGVAWSTGKEFDASWNRGQTFDFRLGAREVIEGWDRGVAGMKVGGRRRLVIPPDLGYGARGAGGVIKGGETLVFVVDLVAV 366
            MS+KP +TIPD  PP+EL + D  VGDGDEAV GK V VHY GVA+STGK+FDASW+RG TFDFRLG  +VI GWD+GVAGMKVGGRRRL IP  LGYG +GAGGVIKGGETLVFVVDLV V
Sbjct:   17 MSQKPEVTIPDSAPPSELVIEDITVGDGDEAVKGKNVAVHYVGVAYSTGKQFDASWDRGDTFDFRLGGGQVIAGWDQGVAGMKVGGRRRLTIPAHLGYGQQGAGGVIKGGETLVFVVDLVNV 138          
BLAST of mRNA_P-wetherbeei_contig14665.2.1 vs. uniprot
Match: A0A7W1HJT4_9ACTN (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W1HJT4_9ACTN)

HSP 1 Score: 183 bits (465), Expect = 1.010e-57
Identity = 89/122 (72.95%), Postives = 102/122 (83.61%), Query Frame = 1
Query:    4 SEKPSITIPDVDPPAELEVHDEVVGDGDEAVVGKRVVVHYAGVAWSTGKEFDASWNRGQTFDFRLGAREVIEGWDRGVAGMKVGGRRRLVIPPDLGYGARGAGGVIKGGETLVFVVDLVAVR 369
            S KP++ IPD DPP EL   D VVGDGDEA  G  V VHY GVAWS+GK+FDASW+R  +FDFRLGA +VI+GWD+GVAGM VGGRRRL IPP+LGYG+RGAGGVIKGGETLVFVVDL+A+ 
Sbjct:    4 SNKPTVVIPDGDPPTELVTEDLVVGDGDEATNGCNVAVHYVGVAWSSGKQFDASWDRRASFDFRLGAGQVIQGWDQGVAGMHVGGRRRLTIPPELGYGSRGAGGVIKGGETLVFVVDLLALN 125          
BLAST of mRNA_P-wetherbeei_contig14665.2.1 vs. uniprot
Match: A0A4P5RI84_9ACTN (Peptidyl-prolyl cis-trans isomerase n=3 Tax=Actinobacteria TaxID=201174 RepID=A0A4P5RI84_9ACTN)

HSP 1 Score: 181 bits (459), Expect = 8.050e-57
Identity = 89/119 (74.79%), Postives = 99/119 (83.19%), Query Frame = 1
Query:   10 KPSITIPDVDPPAELEVHDEVVGDGDEAVVGKRVVVHYAGVAWSTGKEFDASWNRGQTFDFRLGAREVIEGWDRGVAGMKVGGRRRLVIPPDLGYGARGAGGVIKGGETLVFVVDLVAV 366
            KP+ITIP  +PPAEL   D  VG GDEA  GK V VHY GVAWS G+EFDASWNRG  F+FRLGA +VI+GWD GVAGMKVGGRR+L IPPD+GYG+RGAGGVIKGGETLVFVVDL+ V
Sbjct:    5 KPTITIPQEEPPAELVKTDITVGTGDEATKGKNVSVHYVGVAWSNGQEFDASWNRGDAFEFRLGAGQVIQGWDDGVAGMKVGGRRQLTIPPDMGYGSRGAGGVIKGGETLVFVVDLLNV 123          
BLAST of mRNA_P-wetherbeei_contig14665.2.1 vs. uniprot
Match: A0A524B161_9ACTN (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Acidimicrobiales bacterium mtb01 TaxID=1967499 RepID=A0A524B161_9ACTN)

HSP 1 Score: 181 bits (459), Expect = 8.310e-57
Identity = 90/120 (75.00%), Postives = 99/120 (82.50%), Query Frame = 1
Query:   10 KPSITIPDVDPPAELEVHDEVVGDGDEAVVGKRVVVHYAGVAWSTGKEFDASWNRGQTFDFRLGAREVIEGWDRGVAGMKVGGRRRLVIPPDLGYGARGAGGVIKGGETLVFVVDLVAVR 369
            KP IT+P  DPP EL V D VVG+G EA  G R V+HY GV+WSTG+EFDASW+RG TFDFRLGA EVI GWDRGVAGM+VGGRRRL IPP LGYGARGAGGVIK  ETL+FVVDL+ VR
Sbjct:    6 KPVITVPAGDPPFELVVEDLVVGEGKEATAGTRPVMHYVGVSWSTGREFDASWDRGDTFDFRLGAGEVIGGWDRGVAGMRVGGRRRLTIPPHLGYGARGAGGVIKPNETLIFVVDLLDVR 125          
BLAST of mRNA_P-wetherbeei_contig14665.2.1 vs. uniprot
Match: A0A6L6CS31_9ACTN (Peptidyl-prolyl cis-trans isomerase n=3 Tax=root TaxID=1 RepID=A0A6L6CS31_9ACTN)

HSP 1 Score: 177 bits (449), Expect = 2.690e-55
Identity = 86/121 (71.07%), Postives = 100/121 (82.64%), Query Frame = 1
Query:    4 SEKPSITIPDVDPPAELEVHDEVVGDGDEAVVGKRVVVHYAGVAWSTGKEFDASWNRGQTFDFRLGAREVIEGWDRGVAGMKVGGRRRLVIPPDLGYGARGAGGVIKGGETLVFVVDLVAV 366
            S KP++TIP  + P++L + D VVG GDEAV GK V VHY GVAWS GK+FDASW+R + F+FRLGA +VI GWD GVAGMKVGGRR+L IPPD+GYGA GAGGVIKGGETLVFVVDL+ V
Sbjct:    3 STKPTVTIPQSEAPSQLVIDDIVVGTGDEAVKGKNVSVHYVGVAWSNGKQFDASWDRDEAFEFRLGAGQVISGWDNGVAGMKVGGRRQLTIPPDMGYGAHGAGGVIKGGETLVFVVDLLNV 123          
BLAST of mRNA_P-wetherbeei_contig14665.2.1 vs. uniprot
Match: UPI00196A7A28 (FKBP-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Kineococcus vitellinus TaxID=2696565 RepID=UPI00196A7A28)

HSP 1 Score: 176 bits (446), Expect = 1.200e-54
Identity = 86/120 (71.67%), Postives = 98/120 (81.67%), Query Frame = 1
Query:   10 KPSITIPDVDPPAELEVHDEVVGDGDEAVVGKRVVVHYAGVAWSTGKEFDASWNRGQTFDFRLGAREVIEGWDRGVAGMKVGGRRRLVIPPDLGYGARGAGGVIKGGETLVFVVDLVAVR 369
            KP I  P+  PPA+LE+ DEVVGDG EA  G+ V  HY GVA+STG+EFD+SWNRGQ  DF LGA  VI+GWDRG+AGMKVGGRR+LVIPP LGYG RGAGG IKGGETL+FVVDLV V+
Sbjct:   19 KPEIDFPEGQPPADLEITDEVVGDGAEATPGRTVSAHYVGVAFSTGEEFDSSWNRGQPLDFPLGAGMVIQGWDRGIAGMKVGGRRKLVIPPHLGYGDRGAGGAIKGGETLIFVVDLVDVK 138          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14665.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A539DQX5_9ACTN1.490e-7084.55Peptidyl-prolyl cis-trans isomerase n=1 Tax=Acidim... [more]
A0A7K1BC82_9ACTN1.310e-6987.50Peptidyl-prolyl cis-trans isomerase n=2 Tax=root T... [more]
A0A6I2WZI3_9ACTN2.880e-6883.74Peptidyl-prolyl cis-trans isomerase n=5 Tax=root T... [more]
A0A6I3F289_9ACTN2.510e-6580.17Peptidyl-prolyl cis-trans isomerase n=2 Tax=root T... [more]
A0A4P5RXP7_9ACTN1.940e-5875.41Peptidyl-prolyl cis-trans isomerase n=1 Tax=Actino... [more]
A0A7W1HJT4_9ACTN1.010e-5772.95Peptidyl-prolyl cis-trans isomerase n=1 Tax=Acidim... [more]
A0A4P5RI84_9ACTN8.050e-5774.79Peptidyl-prolyl cis-trans isomerase n=3 Tax=Actino... [more]
A0A524B161_9ACTN8.310e-5775.00Peptidyl-prolyl cis-trans isomerase n=1 Tax=Acidim... [more]
A0A6L6CS31_9ACTN2.690e-5571.07Peptidyl-prolyl cis-trans isomerase n=3 Tax=root T... [more]
UPI00196A7A281.200e-5471.67FKBP-type peptidyl-prolyl cis-trans isomerase n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14665contigP-wetherbeei_contig14665:435..806 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog266940.Krad_1877
Preferred namefkbP
PFAMsFKBP_C
Model size372
Max annot lvl201174|Actinobacteria
KEGG koko:K01802,ko:K03772
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.19e-53
EggNOG OGsCOG0545@1|root,COG0545@2|Bacteria,2IHQC@201174|Actinobacteria
EC5.2.1.8
DescriptionPeptidyl-prolyl cis-trans isomerase
Cds size372
COG categoryO
BRITEko00000,ko01000,ko03110
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186029.5105324-CDS-P-wetherbeei_contig14665:434..8061683186029.5105324-CDS-P-wetherbeei_contig14665:434..806Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14665 435..806 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14665.2.1prot_P-wetherbeei_contig14665.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14665 435..806 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14665.2.1

>prot_P-wetherbeei_contig14665.2.1 ID=prot_P-wetherbeei_contig14665.2.1|Name=mRNA_P-wetherbeei_contig14665.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=124bp
MSEKPSITIPDVDPPAELEVHDEVVGDGDEAVVGKRVVVHYAGVAWSTGK
EFDASWNRGQTFDFRLGAREVIEGWDRGVAGMKVGGRRRLVIPPDLGYGA
RGAGGVIKGGETLVFVVDLVAVR*
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mRNA from alignment at P-wetherbeei_contig14665:435..806-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14665.2.1 ID=mRNA_P-wetherbeei_contig14665.2.1|Name=mRNA_P-wetherbeei_contig14665.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=372bp|location=Sequence derived from alignment at P-wetherbeei_contig14665:435..806- (Phaeothamnion wetherbeei SAG_119_79)
ATGAGCGAGAAGCCCAGCATCACCATCCCCGACGTCGACCCGCCTGCCGA GCTGGAGGTGCACGACGAGGTGGTCGGTGACGGCGACGAGGCCGTCGTCG GCAAGCGCGTCGTGGTGCACTACGCGGGCGTGGCGTGGAGCACGGGCAAG GAGTTCGACGCCAGCTGGAACCGCGGGCAGACGTTCGACTTCCGCCTCGG GGCACGAGAGGTGATCGAGGGCTGGGACCGCGGCGTGGCCGGGATGAAGG TCGGCGGTCGTCGTCGCCTCGTCATCCCGCCCGACCTCGGCTACGGCGCA CGTGGCGCGGGCGGCGTGATCAAGGGCGGCGAGACCCTCGTCTTCGTCGT CGACCTCGTCGCCGTTCGCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14665:435..806-

>mRNA_P-wetherbeei_contig14665.2.1 ID=mRNA_P-wetherbeei_contig14665.2.1|Name=mRNA_P-wetherbeei_contig14665.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=372bp|location=Sequence derived from alignment at P-wetherbeei_contig14665:435..806- (Phaeothamnion wetherbeei SAG_119_79)
ATGAGCGAGAAGCCCAGCATCACCATCCCCGACGTCGACCCGCCTGCCGA
GCTGGAGGTGCACGACGAGGTGGTCGGTGACGGCGACGAGGCCGTCGTCG
GCAAGCGCGTCGTGGTGCACTACGCGGGCGTGGCGTGGAGCACGGGCAAG
GAGTTCGACGCCAGCTGGAACCGCGGGCAGACGTTCGACTTCCGCCTCGG
GGCACGAGAGGTGATCGAGGGCTGGGACCGCGGCGTGGCCGGGATGAAGG
TCGGCGGTCGTCGTCGCCTCGTCATCCCGCCCGACCTCGGCTACGGCGCA
CGTGGCGCGGGCGGCGTGATCAAGGGCGGCGAGACCCTCGTCTTCGTCGT
CGACCTCGTCGCCGTTCGCTGA
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