prot_P-wetherbeei_contig1464.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig1464.2.1
Unique Name	prot_P-wetherbeei_contig1464.2.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	102

Homology

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BLAST of mRNA_P-wetherbeei_contig1464.2.1 vs. uniprot
Match: D7FYT5_ECTSI (40S ribosomal protein S17 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYT5_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 1.090e-53
Identity = 88/100 (88.00%), Postives = 94/100 (94.00%), Query Frame = 0

Query:    1 MDFHCNKRVVDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVSAIEQETIDVDPDTKELLDALEFKDLPGITVTAAPAR 100
            MDFH NKRV DEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERR+DFVPEVSAIEQE+ID+DPDTK+LLDAL+FKDL GI V+A P R
Sbjct:   25 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAGIAVSAVPPR 124

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BLAST of mRNA_P-wetherbeei_contig1464.2.1 vs. uniprot
Match: A0A836CIS9_9STRA (40S ribosomal protein S17 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIS9_9STRA)

HSP 1 Score: 166 bits (421), Expect = 2.040e-51
Identity = 86/101 (85.15%), Postives = 94/101 (93.07%), Query Frame = 0

Query:    1 MDFHCNKRVVDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVSAIEQETIDVDPDTKELLDALEFKDLPGITVTAAPARA 101
            +DFH NKRV DEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVSAIEQE I++DPDTKELLDAL+FKD+P +++ A P RA
Sbjct:   25 LDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVSAIEQERIEIDPDTKELLDALDFKDIPNLSIVA-PQRA 124

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BLAST of mRNA_P-wetherbeei_contig1464.2.1 vs. uniprot
Match: F0Y4Q4_AURAN (Uncharacterized protein n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0Y4Q4_AURAN)

HSP 1 Score: 161 bits (408), Expect = 1.840e-49
Identity = 79/95 (83.16%), Postives = 91/95 (95.79%), Query Frame = 0

Query:    1 MDFHCNKRVVDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVSAIEQETIDVDPDTKELLDALEFKDLPGITVT 95
            +DFH NKRV DEVA++PSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERR+DFVPEVSAI+Q+ +++DPDTKE+LDAL+FKDLPGI V+
Sbjct:   25 VDFHTNKRVCDEVAVVPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIDQDFVEIDPDTKEMLDALDFKDLPGIQVS 119

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BLAST of mRNA_P-wetherbeei_contig1464.2.1 vs. uniprot
Match: A0A7S4SMK2_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4SMK2_9DINO)

HSP 1 Score: 160 bits (406), Expect = 4.760e-49
Identity = 80/96 (83.33%), Postives = 90/96 (93.75%), Query Frame = 0

Query:    1 MDFHCNKRVVDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVSAIEQETIDVDPDTKELLDALEFKDLPGITVTA 96
            +DFH NKRV DEVAIIPSKRMRNKIAGF+THLMKRIQRGPVRGISLKLQEEERERR+DFVPEVSA++QE I+VDP TK +LDAL+FKDLPG+ V+A
Sbjct:   35 LDFHTNKRVCDEVAIIPSKRMRNKIAGFITHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSALDQEVIEVDPQTKAMLDALDFKDLPGVQVSA 130

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BLAST of mRNA_P-wetherbeei_contig1464.2.1 vs. uniprot
Match: A0A1E7EU86_9STRA (Ribosomal protein S17 component of cytosolic 80S ribosome and 40S small subunit n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EU86_9STRA)

HSP 1 Score: 148 bits (374), Expect = 3.050e-44
Identity = 72/100 (72.00%), Postives = 88/100 (88.00%), Query Frame = 0

Query:    1 MDFHCNKRVVDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVSAIEQETIDVDPDTKELLDALEFKDLPGITVTAAPAR 100
            +DFH NKR+VDEVAI+PSKRMRNKIAG+ THLM+RI +GPVRGISLKLQEEERERRLDFVPEVSA+EQ+TI +DPDT+++L++L F  L G+ V + P R
Sbjct:   25 LDFHTNKRIVDEVAILPSKRMRNKIAGYTTHLMRRIAKGPVRGISLKLQEEERERRLDFVPEVSALEQDTITIDPDTRDMLESLGFGSLNGVAVNSGPHR 124

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BLAST of mRNA_P-wetherbeei_contig1464.2.1 vs. uniprot
Match: B7FVN4_PHATC (Predicted protein n=9 Tax=Bacillariophyta TaxID=2836 RepID=B7FVN4_PHATC)

HSP 1 Score: 145 bits (366), Expect = 5.040e-43
Identity = 71/100 (71.00%), Postives = 87/100 (87.00%), Query Frame = 0

Query:    1 MDFHCNKRVVDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVSAIEQETIDVDPDTKELLDALEFKDLPGITVTAAPAR 100
            +DFH NKR++D+VAI+PSKRMRNKIAG+ THLM+RI +GPVRGISLKLQEEERERRLDFVPEVSA+EQETI +DPDT++LL++L +  L G+ V  A  R
Sbjct:   25 VDFHTNKRIIDDVAILPSKRMRNKIAGYTTHLMRRIAKGPVRGISLKLQEEERERRLDFVPEVSALEQETIQIDPDTRDLLESLGYGKLNGVAVNQAHTR 124

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BLAST of mRNA_P-wetherbeei_contig1464.2.1 vs. uniprot
Match: A0A482RVV4_9ARCH (40S ribosomal protein S17 (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RVV4_9ARCH)

HSP 1 Score: 144 bits (364), Expect = 8.980e-43
Identity = 75/101 (74.26%), Postives = 86/101 (85.15%), Query Frame = 0

Query:    1 MDFHCNKRVVDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVSAIEQETIDVDPDTKELLDALEFKDLPGITVTAAPARA 101
            +DFH NKR+  EVAIIPSKRMRNKIAGF+THLMKRIQ+GPVRGISLKLQEEERE R+DFVPE SAI+++ I VD DTK +LDAL FKDL G+ V  A A+A
Sbjct:   21 LDFHTNKRITGEVAIIPSKRMRNKIAGFITHLMKRIQKGPVRGISLKLQEEEREARMDFVPERSAIDKDEILVDSDTKAMLDALNFKDLVGVRVADANAKA 121

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BLAST of mRNA_P-wetherbeei_contig1464.2.1 vs. uniprot
Match: E3P7H2_LEPCI (40S ribosomal protein S17 (Fragment) n=1 Tax=Lepidochitona cinerea TaxID=256056 RepID=E3P7H2_LEPCI)

HSP 1 Score: 144 bits (363), Expect = 1.730e-42
Identity = 72/100 (72.00%), Postives = 86/100 (86.00%), Query Frame = 0

Query:    1 MDFHCNKRVVDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVSAIEQETIDVDPDTKELLDALEFKDLPGITVTAAPAR 100
            +DFH NKRV +E+AIIPSK++RNKIAGFVTHLMKRIQRGPVRGIS+KLQEEERERR +FVPEVSAIEQ+ I+VDPDTKE+L  L+F  +P +  T  P +
Sbjct:   24 LDFHSNKRVCEEIAIIPSKKLRNKIAGFVTHLMKRIQRGPVRGISIKLQEEERERRDNFVPEVSAIEQDVIEVDPDTKEMLKMLDFGGIPNLQPTQPPTQ 123

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BLAST of mRNA_P-wetherbeei_contig1464.2.1 vs. uniprot
Match: A0A8J5A5U8_9CHEL (40S ribosomal protein S17 n=1 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J5A5U8_9CHEL)

HSP 1 Score: 144 bits (362), Expect = 3.150e-42
Identity = 72/102 (70.59%), Postives = 89/102 (87.25%), Query Frame = 0

Query:    1 MDFHCNKRVVDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVSAIEQETIDVDPDTKELLDALEFKDLPGIT-VTAAPARA 101
            +DFH NKR+ +E+AIIPSK++RNKIAGFVTHLMKRIQ+GPVRGIS+KLQEEERERR ++VPEVSAI+Q+ I+VDPDTKE+L  LEF  +PG+   T+ P RA
Sbjct:   26 LDFHTNKRICEEIAIIPSKKLRNKIAGFVTHLMKRIQKGPVRGISIKLQEEERERRDNYVPEVSAIDQDIIEVDPDTKEMLKMLEFDSIPGLQFTTSVPFRA 127

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BLAST of mRNA_P-wetherbeei_contig1464.2.1 vs. uniprot
Match: A0A0A0R236_9ANNE (40S ribosomal protein S17 n=2 Tax=Phragmatopoma lapidosa TaxID=341668 RepID=A0A0A0R236_9ANNE)

HSP 1 Score: 143 bits (361), Expect = 3.720e-42
Identity = 71/101 (70.30%), Postives = 87/101 (86.14%), Query Frame = 0

Query:    1 MDFHCNKRVVDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVSAIEQETIDVDPDTKELLDALEFKDLPGITVTAAPARA 101
            MDFH NKRV +E+AIIPSK++RNKIAGFVTHLMKRIQRGPVRGIS+KLQEEERERR ++VPEVSAIE + I+VDPDTKE+L  L+  ++PG+ +T    +A
Sbjct:   26 MDFHTNKRVCEEIAIIPSKKLRNKIAGFVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSAIEHDIIEVDPDTKEMLKLLDMSNIPGLQITQPVTQA 126

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig1464.2.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig1464.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FYT5_ECTSI	1.090e-53	88.00	40S ribosomal protein S17 n=2 Tax=Ectocarpus TaxID...	[more]
A0A836CIS9_9STRA	2.040e-51	85.15	40S ribosomal protein S17 n=2 Tax=Tribonema minus ...	[more]
F0Y4Q4_AURAN	1.840e-49	83.16	Uncharacterized protein n=2 Tax=Pelagomonadales Ta...	[more]
A0A7S4SMK2_9DINO	4.760e-49	83.33	Hypothetical protein (Fragment) n=1 Tax=Alexandriu...	[more]
A0A1E7EU86_9STRA	3.050e-44	72.00	Ribosomal protein S17 component of cytosolic 80S r...	[more]
B7FVN4_PHATC	5.040e-43	71.00	Predicted protein n=9 Tax=Bacillariophyta TaxID=28...	[more]
A0A482RVV4_9ARCH	8.980e-43	74.26	40S ribosomal protein S17 (Fragment) n=1 Tax=archa...	[more]
E3P7H2_LEPCI	1.730e-42	72.00	40S ribosomal protein S17 (Fragment) n=1 Tax=Lepid...	[more]
A0A8J5A5U8_9CHEL	3.150e-42	70.59	40S ribosomal protein S17 n=1 Tax=Nymphon striatum...	[more]
A0A0A0R236_9ANNE	3.720e-42	70.30	40S ribosomal protein S17 n=2 Tax=Phragmatopoma la...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001210	Ribosomal protein S17e	PFAM	PF00833	Ribosomal_S17e	coord: 2..95 e-value: 8.2E-45 score: 151.7
IPR001210	Ribosomal protein S17e	PANTHER	PTHR10732	40S RIBOSOMAL PROTEIN S17	coord: 2..95
IPR036401	Ribosomal protein S17e-like superfamily	GENE3D	1.10.60.20		coord: 1..37 e-value: 2.1E-18 score: 67.6
IPR036401	Ribosomal protein S17e-like superfamily	SUPERFAMILY	116820	Rps17e-like	coord: 2..37
IPR018273	Ribosomal protein S17e, conserved site	PROSITE	PS00712	RIBOSOMAL_S17E	coord: 16..31

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig1464	contig	P-wetherbeei_contig1464:3994..5386 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig1464.2.1	mRNA_P-wetherbeei_contig1464.2.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig1464 3196..5386 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig1464.2.1 ID=prot_P-wetherbeei_contig1464.2.1|Name=mRNA_P-wetherbeei_contig1464.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=102bp
MDFHCNKRVVDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQE
EERERRLDFVPEVSAIEQETIDVDPDTKELLDALEFKDLPGITVTAAPAR
A*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001210	Ribosomal_S17e
IPR036401	RPS17e-like_sf
IPR018273	Ribosomal_S17e_CS