mRNA_P-wetherbeei_contig1464.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1464.2.1 vs. uniprot
Match: D7FYT5_ECTSI (40S ribosomal protein S17 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYT5_ECTSI) HSP 1 Score: 212 bits (539), Expect = 2.970e-65 Identity = 110/123 (89.43%), Postives = 116/123 (94.31%), Query Frame = 1
Query: 730 GVRTKTVKKSARVIIEKYYSRLTMDFHCNKRVVDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVSAIEQETIDVDPDTKELLDALEFKDLPGITVTAAPAR 1098
GVRTKTVKKSAR IIEKYYSRLTMDFH NKRV DEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERR+DFVPEVSAIEQE+ID+DPDTK+LLDAL+FKDL GI V+A P R
Sbjct: 2 GVRTKTVKKSARAIIEKYYSRLTMDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAGIAVSAVPPR 124
BLAST of mRNA_P-wetherbeei_contig1464.2.1 vs. uniprot
Match: A0A836CIS9_9STRA (40S ribosomal protein S17 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIS9_9STRA) HSP 1 Score: 207 bits (528), Expect = 1.300e-63 Identity = 109/124 (87.90%), Postives = 117/124 (94.35%), Query Frame = 1
Query: 730 GVRTKTVKKSARVIIEKYYSRLTMDFHCNKRVVDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVSAIEQETIDVDPDTKELLDALEFKDLPGITVTAAPARA 1101
GVRTKTVKKSARVIIEKYYSRLT+DFH NKRV DEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVSAIEQE I++DPDTKELLDAL+FKD+P +++ A P RA
Sbjct: 2 GVRTKTVKKSARVIIEKYYSRLTLDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVSAIEQERIEIDPDTKELLDALDFKDIPNLSIVA-PQRA 124
BLAST of mRNA_P-wetherbeei_contig1464.2.1 vs. uniprot
Match: A0A7S4SMK2_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4SMK2_9DINO) HSP 1 Score: 202 bits (515), Expect = 1.430e-61 Identity = 103/121 (85.12%), Postives = 113/121 (93.39%), Query Frame = 1
Query: 724 NQGVRTKTVKKSARVIIEKYYSRLTMDFHCNKRVVDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVSAIEQETIDVDPDTKELLDALEFKDLPGITVTA 1086
N GVRTKTVKKSAR IIEKYYSRLT+DFH NKRV DEVAIIPSKRMRNKIAGF+THLMKRIQRGPVRGISLKLQEEERERR+DFVPEVSA++QE I+VDP TK +LDAL+FKDLPG+ V+A
Sbjct: 10 NMGVRTKTVKKSARTIIEKYYSRLTLDFHTNKRVCDEVAIIPSKRMRNKIAGFITHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSALDQEVIEVDPQTKAMLDALDFKDLPGVQVSA 130
BLAST of mRNA_P-wetherbeei_contig1464.2.1 vs. uniprot
Match: F0Y4Q4_AURAN (Uncharacterized protein n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0Y4Q4_AURAN) HSP 1 Score: 197 bits (501), Expect = 1.410e-59 Identity = 98/118 (83.05%), Postives = 113/118 (95.76%), Query Frame = 1
Query: 730 GVRTKTVKKSARVIIEKYYSRLTMDFHCNKRVVDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVSAIEQETIDVDPDTKELLDALEFKDLPGITVT 1083
GVRTKTVK+SAR+I+EKYYSRL +DFH NKRV DEVA++PSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERR+DFVPEVSAI+Q+ +++DPDTKE+LDAL+FKDLPGI V+
Sbjct: 2 GVRTKTVKRSARLIVEKYYSRLGVDFHTNKRVCDEVAVVPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIDQDFVEIDPDTKEMLDALDFKDLPGIQVS 119
BLAST of mRNA_P-wetherbeei_contig1464.2.1 vs. uniprot
Match: A0A1E7EU86_9STRA (Ribosomal protein S17 component of cytosolic 80S ribosome and 40S small subunit n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EU86_9STRA) HSP 1 Score: 184 bits (466), Expect = 2.790e-54 Identity = 91/123 (73.98%), Postives = 108/123 (87.80%), Query Frame = 1
Query: 730 GVRTKTVKKSARVIIEKYYSRLTMDFHCNKRVVDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVSAIEQETIDVDPDTKELLDALEFKDLPGITVTAAPAR 1098
GVRTKTVKKSAR I+E YY RLT+DFH NKR+VDEVAI+PSKRMRNKIAG+ THLM+RI +GPVRGISLKLQEEERERRLDFVPEVSA+EQ+TI +DPDT+++L++L F L G+ V + P R
Sbjct: 2 GVRTKTVKKSARTIVENYYPRLTLDFHTNKRIVDEVAILPSKRMRNKIAGYTTHLMRRIAKGPVRGISLKLQEEERERRLDFVPEVSALEQDTITIDPDTRDMLESLGFGSLNGVAVNSGPHR 124
BLAST of mRNA_P-wetherbeei_contig1464.2.1 vs. uniprot
Match: A0A7S0LDM9_9EUKA (Hypothetical protein n=2 Tax=Eukaryota TaxID=2759 RepID=A0A7S0LDM9_9EUKA) HSP 1 Score: 183 bits (464), Expect = 5.220e-54 Identity = 95/122 (77.87%), Postives = 107/122 (87.70%), Query Frame = 1
Query: 730 GVRTKTVKKSARVIIEKYYSRLTMDFHCNKRVVDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVSAIEQETIDVDPDTKELLDALEFKDLPGITVTAAPA 1095
GVRTKTVKKSARVIIEKYYS+LT+DFH NKRV EVAIIPSKRMRNKIAGF+THLMKRIQRGPVRGISLKLQEEERE RLDFVPE SAIEQ+ I +D DTK++L+++ FKD+ G+ V A
Sbjct: 2 GVRTKTVKKSARVIIEKYYSKLTLDFHTNKRVTAEVAIIPSKRMRNKIAGFITHLMKRIQRGPVRGISLKLQEEEREARLDFVPERSAIEQDVIVIDQDTKDMLESINFKDMSGVQVAEGRA 123
BLAST of mRNA_P-wetherbeei_contig1464.2.1 vs. uniprot
Match: B7FVN4_PHATC (Predicted protein n=9 Tax=Bacillariophyta TaxID=2836 RepID=B7FVN4_PHATC) HSP 1 Score: 182 bits (463), Expect = 7.860e-54 Identity = 91/123 (73.98%), Postives = 108/123 (87.80%), Query Frame = 1
Query: 730 GVRTKTVKKSARVIIEKYYSRLTMDFHCNKRVVDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVSAIEQETIDVDPDTKELLDALEFKDLPGITVTAAPAR 1098
GVRTKTVKKSAR I+EKYY RLT+DFH NKR++D+VAI+PSKRMRNKIAG+ THLM+RI +GPVRGISLKLQEEERERRLDFVPEVSA+EQETI +DPDT++LL++L + L G+ V A R
Sbjct: 2 GVRTKTVKKSARTIVEKYYPRLTVDFHTNKRIIDDVAILPSKRMRNKIAGYTTHLMRRIAKGPVRGISLKLQEEERERRLDFVPEVSALEQETIQIDPDTRDLLESLGYGKLNGVAVNQAHTR 124
BLAST of mRNA_P-wetherbeei_contig1464.2.1 vs. uniprot
Match: A0A7S2YDZ4_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YDZ4_9STRA) HSP 1 Score: 180 bits (456), Expect = 8.520e-53 Identity = 87/117 (74.36%), Postives = 107/117 (91.45%), Query Frame = 1
Query: 730 GVRTKTVKKSARVIIEKYYSRLTMDFHCNKRVVDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVSAIEQETIDVDPDTKELLDALEFKDLPGITV 1080
GVRTKT+KKSAR I+EKYY+RLT+DFH NKR++D+VAI+PSKR+RNKIAG+ THLM+RI +GPVRGISLKLQEEERERRLDFVPEVSA+EQETI +DPDT+++L++L F L G+ V
Sbjct: 2 GVRTKTIKKSARTIVEKYYTRLTLDFHTNKRLIDDVAILPSKRIRNKIAGYTTHLMRRIAKGPVRGISLKLQEEERERRLDFVPEVSALEQETIQIDPDTRDMLESLGFNGLAGVAV 118
BLAST of mRNA_P-wetherbeei_contig1464.2.1 vs. uniprot
Match: A0A7S1UGI2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UGI2_9STRA) HSP 1 Score: 180 bits (457), Expect = 1.070e-52 Identity = 91/120 (75.83%), Postives = 106/120 (88.33%), Query Frame = 1
Query: 730 GVRTKTVKKSARVIIEKYYSRLTMDFHCNKRVVDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVSAIEQETIDVDPDTKELLDALEFKDLPGITVTAA 1089
GVRTKTVKKSAR IIEKYY+RLT+DFH NKR+VDEVA++PSKRMRNKIAGF+THLMKRIQ GPVR ISLKLQEEERERRLDFVP+VSA+ QE I+VD DT ++L+AL F +PG+ + A
Sbjct: 12 GVRTKTVKKSARSIIEKYYTRLTLDFHTNKRIVDEVAVVPSKRMRNKIAGFITHLMKRIQSGPVRNISLKLQEEERERRLDFVPDVSALSQELIEVDQDTHDMLEALGFGSVPGVQIEKA 131
BLAST of mRNA_P-wetherbeei_contig1464.2.1 vs. uniprot
Match: A0A4D9CUE3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUE3_9STRA) HSP 1 Score: 179 bits (454), Expect = 1.320e-52 Identity = 94/114 (82.46%), Postives = 104/114 (91.23%), Query Frame = 1
Query: 730 GVRTKTVKKSARVIIEKYYSRLTMDFHCNKRVVDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVSAIEQETIDVDPDTKELLDALEFKDLPG 1071
GVRTKTVKKSARVIIEKYYSRLTMDFH NKRVVDEVA +PSKRMRNKIAGFVTHLMKRIQ+GPVRGISLKLQEEERERRLDFVPEVS IEQE +VD D ++L++ + FK++ G
Sbjct: 2 GVRTKTVKKSARVIIEKYYSRLTMDFHTNKRVVDEVAEVPSKRMRNKIAGFVTHLMKRIQKGPVRGISLKLQEEERERRLDFVPEVSLIEQEQPEVDQDLRDLMEHIGFKEILG 115 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1464.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1464.2.1 >prot_P-wetherbeei_contig1464.2.1 ID=prot_P-wetherbeei_contig1464.2.1|Name=mRNA_P-wetherbeei_contig1464.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=102bp MDFHCNKRVVDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEback to top mRNA from alignment at P-wetherbeei_contig1464:3196..5386+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1464.2.1 ID=mRNA_P-wetherbeei_contig1464.2.1|Name=mRNA_P-wetherbeei_contig1464.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2191bp|location=Sequence derived from alignment at P-wetherbeei_contig1464:3196..5386+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1464:3196..5386+ >mRNA_P-wetherbeei_contig1464.2.1 ID=mRNA_P-wetherbeei_contig1464.2.1|Name=mRNA_P-wetherbeei_contig1464.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=306bp|location=Sequence derived from alignment at P-wetherbeei_contig1464:3196..5386+ (Phaeothamnion wetherbeei SAG_119_79)back to top |