mRNA_P-wetherbeei_contig14631.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14631.3.1
Unique NamemRNA_P-wetherbeei_contig14631.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14631.3.1 vs. uniprot
Match: A0A671VU06_SPAAU (Zinc finger AN1-type containing 1 n=9 Tax=Percomorphaceae TaxID=1489872 RepID=A0A671VU06_SPAAU)

HSP 1 Score: 55.8 bits (133), Expect = 4.470e-8
Identity = 22/33 (66.67%), Postives = 25/33 (75.76%), Query Frame = 1
Query:   16 DLGSYCAISSCNQRDFLPFACDCCLERFCLPHR 114
            D+G +C I SCNQ+DFLPF CDCC   FCL HR
Sbjct:    5 DIGKHCQIDSCNQKDFLPFVCDCCSGVFCLDHR 37          
BLAST of mRNA_P-wetherbeei_contig14631.3.1 vs. uniprot
Match: H2TA98_TAKRU (Uncharacterized protein n=2 Tax=Takifugu TaxID=31032 RepID=H2TA98_TAKRU)

HSP 1 Score: 55.5 bits (132), Expect = 6.170e-8
Identity = 21/33 (63.64%), Postives = 25/33 (75.76%), Query Frame = 1
Query:   16 DLGSYCAISSCNQRDFLPFACDCCLERFCLPHR 114
            D+GS+C + SCNQ+DFLPF CDCC   FC  HR
Sbjct:    5 DIGSHCQVKSCNQKDFLPFVCDCCSGVFCFEHR 37          
BLAST of mRNA_P-wetherbeei_contig14631.3.1 vs. uniprot
Match: H3CJZ4_TETNG (Zinc finger, AN1-type domain 1 n=1 Tax=Tetraodon nigroviridis TaxID=99883 RepID=H3CJZ4_TETNG)

HSP 1 Score: 55.1 bits (131), Expect = 8.450e-8
Identity = 21/33 (63.64%), Postives = 25/33 (75.76%), Query Frame = 1
Query:   16 DLGSYCAISSCNQRDFLPFACDCCLERFCLPHR 114
            D+G +C + SCNQ+DFLPF CDCC   FCL HR
Sbjct:    5 DIGKHCQVESCNQKDFLPFVCDCCRGVFCLVHR 37          
BLAST of mRNA_P-wetherbeei_contig14631.3.1 vs. uniprot
Match: A0A3R7D7M3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R7D7M3_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 1.910e-7
Identity = 21/33 (63.64%), Postives = 25/33 (75.76%), Query Frame = 1
Query:   16 DLGSYCAISSCNQRDFLPFACDCCLERFCLPHR 114
            D+G +C+   CNQ+DFLPFACDCC   FCL HR
Sbjct:    4 DIGEHCSKPGCNQKDFLPFACDCCSGVFCLEHR 36          
BLAST of mRNA_P-wetherbeei_contig14631.3.1 vs. uniprot
Match: A0A6G0XFZ2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XFZ2_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 3.210e-7
Identity = 21/33 (63.64%), Postives = 25/33 (75.76%), Query Frame = 1
Query:   16 DLGSYCAISSCNQRDFLPFACDCCLERFCLPHR 114
            D+G +CA   CNQ+DFLPF+CDCC   FCL HR
Sbjct:    4 DIGEHCAKPGCNQKDFLPFSCDCCSGVFCLEHR 36          
BLAST of mRNA_P-wetherbeei_contig14631.3.1 vs. uniprot
Match: A0A485L9P1_9STRA (Aste57867_18181 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L9P1_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 4.510e-7
Identity = 21/33 (63.64%), Postives = 25/33 (75.76%), Query Frame = 1
Query:   16 DLGSYCAISSCNQRDFLPFACDCCLERFCLPHR 114
            D+G +C+   CNQ+DFLPFACDCC   FCL HR
Sbjct:    4 DIGEHCSKPGCNQKDFLPFACDCCEGVFCLEHR 36          
BLAST of mRNA_P-wetherbeei_contig14631.3.1 vs. uniprot
Match: A0A067CPY8_SAPPC (C2H2-type domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CPY8_SAPPC)

HSP 1 Score: 52.8 bits (125), Expect = 5.430e-7
Identity = 21/33 (63.64%), Postives = 25/33 (75.76%), Query Frame = 1
Query:   16 DLGSYCAISSCNQRDFLPFACDCCLERFCLPHR 114
            D+G +C+   CNQ+DFLPFACDCC   FCL HR
Sbjct:    2 DVGEHCSNPGCNQKDFLPFACDCCNGIFCLEHR 34          
BLAST of mRNA_P-wetherbeei_contig14631.3.1 vs. uniprot
Match: A0A811KI88_9BILA (Hypothetical protein n=1 Tax=Bursaphelenchus okinawaensis TaxID=465554 RepID=A0A811KI88_9BILA)

HSP 1 Score: 51.2 bits (121), Expect = 1.150e-6
Identity = 23/37 (62.16%), Postives = 27/37 (72.97%), Query Frame = 1
Query:    1 MTEFNDLGSYCAISSCNQRDFLPFACDCCLERFCLPH 111
            M EF +LGS+CAISSCN  DFLPF C  C + FC+ H
Sbjct:    1 MAEFPNLGSHCAISSCNLLDFLPFKCYKCDKEFCIEH 37          
BLAST of mRNA_P-wetherbeei_contig14631.3.1 vs. uniprot
Match: A0A1V9ZLT5_9STRA (AN1-type domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZLT5_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 1.240e-6
Identity = 21/33 (63.64%), Postives = 24/33 (72.73%), Query Frame = 1
Query:   16 DLGSYCAISSCNQRDFLPFACDCCLERFCLPHR 114
            D+G +CA   CNQ+DFLPF CDCC   FCL HR
Sbjct:    4 DIGEHCARPGCNQKDFLPFPCDCCGGVFCLEHR 36          
BLAST of mRNA_P-wetherbeei_contig14631.3.1 vs. uniprot
Match: A0A1I7SUB4_BURXY (AN1-type domain-containing protein n=2 Tax=Bursaphelenchus xylophilus TaxID=6326 RepID=A0A1I7SUB4_BURXY)

HSP 1 Score: 48.9 bits (115), Expect = 8.480e-6
Identity = 21/37 (56.76%), Postives = 26/37 (70.27%), Query Frame = 1
Query:    1 MTEFNDLGSYCAISSCNQRDFLPFACDCCLERFCLPH 111
            M EF +LGS+CA+SSCN  DFLP+ C  C + FC  H
Sbjct:    1 MAEFPNLGSHCAVSSCNLLDFLPYKCFKCEKEFCAEH 37          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14631.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A671VU06_SPAAU4.470e-866.67Zinc finger AN1-type containing 1 n=9 Tax=Percomor... [more]
H2TA98_TAKRU6.170e-863.64Uncharacterized protein n=2 Tax=Takifugu TaxID=310... [more]
H3CJZ4_TETNG8.450e-863.64Zinc finger, AN1-type domain 1 n=1 Tax=Tetraodon n... [more]
A0A3R7D7M3_9STRA1.910e-763.64Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A6G0XFZ2_9STRA3.210e-763.64Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A485L9P1_9STRA4.510e-763.64Aste57867_18181 protein n=1 Tax=Aphanomyces stella... [more]
A0A067CPY8_SAPPC5.430e-763.64C2H2-type domain-containing protein n=2 Tax=Saprol... [more]
A0A811KI88_9BILA1.150e-662.16Hypothetical protein n=1 Tax=Bursaphelenchus okina... [more]
A0A1V9ZLT5_9STRA1.240e-663.64AN1-type domain-containing protein n=1 Tax=Achlya ... [more]
A0A1I7SUB4_BURXY8.480e-656.76AN1-type domain-containing protein n=2 Tax=Bursaph... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14631contigP-wetherbeei_contig14631:1579..1692 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog272952.HpaP805688
PFAMszf-AN1
Model size114
Max annot lvl4776|Peronosporales
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Evalue3.22e-09
EggNOG OGsKOG3183@1|root,KOG3183@2759|Eukaryota,3QBNJ@4776|Peronosporales
DescriptionAN1-like Zinc finger
Cds size114
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186028.4127245-CDS-P-wetherbeei_contig14631:1578..16921683186028.4127245-CDS-P-wetherbeei_contig14631:1578..1692Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14631 1579..1692 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14631.3.1prot_P-wetherbeei_contig14631.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14631 1579..1692 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14631.3.1

>prot_P-wetherbeei_contig14631.3.1 ID=prot_P-wetherbeei_contig14631.3.1|Name=mRNA_P-wetherbeei_contig14631.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=38bp
MTEFNDLGSYCAISSCNQRDFLPFACDCCLERFCLPHR
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mRNA from alignment at P-wetherbeei_contig14631:1579..1692+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14631.3.1 ID=mRNA_P-wetherbeei_contig14631.3.1|Name=mRNA_P-wetherbeei_contig14631.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=114bp|location=Sequence derived from alignment at P-wetherbeei_contig14631:1579..1692+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACGGAATTCAACGACCTCGGCTCATACTGCGCCATCTCCAGCTGCAA TCAGCGCGACTTCCTGCCGTTCGCCTGCGATTGCTGCCTCGAGCGCTTCT GCCTGCCACATCGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14631:1579..1692+

>mRNA_P-wetherbeei_contig14631.3.1 ID=mRNA_P-wetherbeei_contig14631.3.1|Name=mRNA_P-wetherbeei_contig14631.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=114bp|location=Sequence derived from alignment at P-wetherbeei_contig14631:1579..1692+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACGGAATTCAACGACCTCGGCTCATACTGCGCCATCTCCAGCTGCAA
TCAGCGCGACTTCCTGCCGTTCGCCTGCGATTGCTGCCTCGAGCGCTTCT
GCCTGCCACATCGA
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