mRNA_P-wetherbeei_contig14616.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14616.1.1 vs. uniprot
Match: D7FIG0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIG0_ECTSI) HSP 1 Score: 151 bits (382), Expect = 1.980e-40 Identity = 67/103 (65.05%), Postives = 83/103 (80.58%), Query Frame = 1
Query: 4 LLGREERVRIFGVDCVGPHGDGALFRGGEWAPGGEYTQRLRVKNVGTRLCKLKYSLPGTKFFSLPYPEVLVLSPGTTHEVEVTFRPLRDDVYDDSIFFRLLDG 312
+L R+ R+++FG+DC GP GDG +F+GGEWAPGGEY QRLRVKNV +L KLKY LP TK+FSL YPEV+ LSPGT EV+V FRP+ +VYDD I F++LDG
Sbjct: 48 VLSRKSRLQVFGIDCTGPFGDGIVFKGGEWAPGGEYVQRLRVKNVSPKLKKLKYRLPTTKYFSLAYPEVITLSPGTMQEVDVVFRPVSSEVYDDVILFKVLDG 150
BLAST of mRNA_P-wetherbeei_contig14616.1.1 vs. uniprot
Match: A0A6H5L764_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L764_9PHAE) HSP 1 Score: 145 bits (366), Expect = 6.940e-40 Identity = 64/95 (67.37%), Postives = 78/95 (82.11%), Query Frame = 1
Query: 28 RIFGVDCVGPHGDGALFRGGEWAPGGEYTQRLRVKNVGTRLCKLKYSLPGTKFFSLPYPEVLVLSPGTTHEVEVTFRPLRDDVYDDSIFFRLLDG 312
++FG+DC GP GDG +F+GGEWAPGGEY QRLRVKNV ++L KLKY LP TK+FSL YPEV+ LSPGT EV+V FRP+ +VYDD I F++LDG
Sbjct: 13 QVFGIDCTGPFGDGIVFKGGEWAPGGEYVQRLRVKNVSSKLKKLKYRLPTTKYFSLAYPEVITLSPGTMQEVDVVFRPVSSEVYDDVILFKVLDG 107
BLAST of mRNA_P-wetherbeei_contig14616.1.1 vs. uniprot
Match: A0A836C8F2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8F2_9STRA) HSP 1 Score: 137 bits (346), Expect = 1.380e-35 Identity = 59/103 (57.28%), Postives = 83/103 (80.58%), Query Frame = 1
Query: 4 LLGREERVRIFGVDCVGPHGDGALFRGGEWAPGGEYTQRLRVKNVGTRLCKLKYSLPGTKFFSLPYPEVLVLSPGTTHEVEVTFRPLRDDVYDDSIFFRLLDG 312
++ R +RV++FG++C GP GDG +FRGGEW+PGGEY Q+L VKNV T L KLKY LP +++FS+ YPE++VLSPG V+V FRP+ ++VYD++IFF++ DG
Sbjct: 10 VISRADRVKVFGIECTGPVGDGIVFRGGEWSPGGEYIQKLTVKNVTTELKKLKYRLPTSRYFSMAYPELIVLSPGMEVVVDVVFRPVLEEVYDETIFFKVQDG 112
BLAST of mRNA_P-wetherbeei_contig14616.1.1 vs. uniprot
Match: A0A482UVF9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UVF9_9ARCH) HSP 1 Score: 133 bits (334), Expect = 3.010e-35 Identity = 56/104 (53.85%), Postives = 79/104 (75.96%), Query Frame = 1
Query: 1 VLLGREERVRIFGVDCVGPHGDGALFRGGEWAPGGEYTQRLRVKNVGTRLCKLKYSLPGTKFFSLPYPEVLVLSPGTTHEVEVTFRPLRDDVYDDSIFFRLLDG 312
V + R+ER+R FG++C+GP GDG FR G W PGGEY Q+L ++NV T + KLKY LP T++FS+ YP+ +VLSPG + EV+V FRP+ + YDD+I+ ++LDG
Sbjct: 114 VPMDRDERIRRFGIECIGPAGDGIFFRAGTWRPGGEYIQKLIIRNVSTSVKKLKYKLPSTRYFSMAYPDPIVLSPGLSQEVDVVFRPVEYEPYDDTIYIKMLDG 217
BLAST of mRNA_P-wetherbeei_contig14616.1.1 vs. uniprot
Match: A0A7S1U5R9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U5R9_9STRA) HSP 1 Score: 133 bits (334), Expect = 5.820e-34 Identity = 58/101 (57.43%), Postives = 77/101 (76.24%), Query Frame = 1
Query: 4 LLGREERVRIFGVDCVGPHGDGALFRGGEWAPGGEYTQRLRVKNVGTRLCKLKYSLPGTKFFSLPYPEVLVLSPGTTHEVEVTFRPLRDDVYDDSIFFRLL 306
+L EER R FG++CVGP GDG F+GGEW PGGEY Q+LR++NV T + KLKY LP TK+F +PYPE++VLSPG EV+V FRP+ + Y D+I+ R++
Sbjct: 11 ILPVEERARRFGIECVGPFGDGITFKGGEWVPGGEYIQKLRIRNVSTAVKKLKYRLPRTKYFGMPYPELVVLSPGMVVEVDVVFRPVLYEAYQDTIYIRMM 111
BLAST of mRNA_P-wetherbeei_contig14616.1.1 vs. uniprot
Match: A0A8J2S9Y5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S9Y5_9STRA) HSP 1 Score: 125 bits (313), Expect = 4.000e-31 Identity = 58/111 (52.25%), Postives = 79/111 (71.17%), Query Frame = 1
Query: 1 VLLGREERVRIFGVDCVGP----------HGDGALFRGGEWAPGGEYTQRLRVKNVGTRLCKLKYSLPGTKFFSLPYPEVLVLSPGTTHEVEVTFRPLRDDVYDDSIFFRL 303
VL+ +EERV FGV C GP DG LF GGEW PGGEY Q+L VKNV T++ KLKY LP T++FSL +PE + LSPG + E++V FRP+++++Y+D+I+F+L
Sbjct: 7 VLMDQEERVARFGVLCTGPTRRDANGVVIEQDGILFAGGEWVPGGEYAQKLTVKNVTTKMKKLKYKLPQTRYFSLAFPETIELSPGMSQEIDVIFRPIKEEIYEDTIYFKL 117
BLAST of mRNA_P-wetherbeei_contig14616.1.1 vs. uniprot
Match: A0A7R9UBL0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBL0_9STRA) HSP 1 Score: 110 bits (276), Expect = 2.460e-27 Identity = 53/94 (56.38%), Postives = 69/94 (73.40%), Query Frame = 1
Query: 10 GREERVRIFGVDCVGPHGDGALFRGGEWAPGGEYTQRLRVKNVGTRLCKLKYSLPGTKFFSLPYPEVLVLSPGTTHEVEVTFRPLRDDVYDDSI 291
G E R FG++ GP+G G FR GEW+PGGE+ Q+LRV+NV + + KLKY LP +K+FS+PYPEV+ LSPG +VEVTFRP+ + Y DSI
Sbjct: 81 GEEWSGRHFGIEVSGPYGPGIHFRSGEWSPGGEHVQKLRVRNVSSVVKKLKYKLPTSKYFSMPYPEVVTLSPGMLVDVEVTFRPIVYEPYLDSI 174
BLAST of mRNA_P-wetherbeei_contig14616.1.1 vs. uniprot
Match: A0A397A6X0_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397A6X0_9STRA) HSP 1 Score: 105 bits (263), Expect = 2.110e-26 Identity = 51/105 (48.57%), Postives = 71/105 (67.62%), Query Frame = 1
Query: 4 LLGREERVRIFGVDCVGPHGDGALFRGGEWAPGGEYTQRLRVKNVGTRLCKLKYSLPGTKFFSLPYPEVLVLSPGTTHEVEVTFRPLRDDVYDDSI--FFRLLDG 312
+L R E+ R FG+DC GD LF G WAPGGE+T++L VKNV R KLKY LP TK+FS+ +P ++ LSPGT+ +++ FRP++ + YDD I ++DG
Sbjct: 39 VLNRVEQQRNFGIDC----GDEILFAAGAWAPGGEHTKKLHVKNVSNRTLKLKYDLPRTKYFSMEFPVLITLSPGTSRVLDIAFRPVQYEEYDDFIRVLVHIIDG 139
BLAST of mRNA_P-wetherbeei_contig14616.1.1 vs. uniprot
Match: A0A7R9Y665_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9Y665_MICPS) HSP 1 Score: 103 bits (256), Expect = 6.110e-26 Identity = 45/100 (45.00%), Postives = 69/100 (69.00%), Query Frame = 1
Query: 4 LLGREERVRIFGVDCVGPHGDGALFRGGEWAPGGEYTQRLRVKNVGTRLCKLKYSLPGTKFFSLPYPEVLVLSPGTTHEVEVTFRPLRDDVYDDSIFFRL 303
+ R ERV+++G+DC + +RGG W PGGEY + + +KNV T+ KLKY +P TK+F L +PEV+ LSPG + V+VTFRP++ + Y+D + F++
Sbjct: 3 MTARYERVQVWGIDCP----ERLTWRGGTWEPGGEYVRTIALKNVSTKTLKLKYRMPKTKYFELEFPEVITLSPGMSASVDVTFRPIKTEQYEDFVEFKV 98
BLAST of mRNA_P-wetherbeei_contig14616.1.1 vs. uniprot
Match: A0A3R6WDH1_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6WDH1_9STRA) HSP 1 Score: 105 bits (263), Expect = 1.130e-25 Identity = 51/105 (48.57%), Postives = 71/105 (67.62%), Query Frame = 1
Query: 4 LLGREERVRIFGVDCVGPHGDGALFRGGEWAPGGEYTQRLRVKNVGTRLCKLKYSLPGTKFFSLPYPEVLVLSPGTTHEVEVTFRPLRDDVYDDSI--FFRLLDG 312
+L R E+ R FG+DC GD LF G WAPGGE+T++L VKNV R KLKY LP TK+FS+ +P ++ LSPGT+ +++ FRP++ + YDD I ++DG
Sbjct: 116 VLNRVEQQRNFGIDC----GDEILFAAGAWAPGGEHTKKLHVKNVSNRTLKLKYDLPRTKYFSMEFPVLITLSPGTSRVLDIAFRPVQYEEYDDFIRVLVHIIDG 216 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14616.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14616.1.1 >prot_P-wetherbeei_contig14616.1.1 ID=prot_P-wetherbeei_contig14616.1.1|Name=mRNA_P-wetherbeei_contig14616.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=104bp VLLGREERVRIFGVDCVGPHGDGALFRGGEWAPGGEYTQRLRVKNVGTRLback to top mRNA from alignment at P-wetherbeei_contig14616:228..745- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14616.1.1 ID=mRNA_P-wetherbeei_contig14616.1.1|Name=mRNA_P-wetherbeei_contig14616.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=518bp|location=Sequence derived from alignment at P-wetherbeei_contig14616:228..745- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14616:228..745- >mRNA_P-wetherbeei_contig14616.1.1 ID=mRNA_P-wetherbeei_contig14616.1.1|Name=mRNA_P-wetherbeei_contig14616.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=312bp|location=Sequence derived from alignment at P-wetherbeei_contig14616:228..745- (Phaeothamnion wetherbeei SAG_119_79)back to top |