mRNA_P-wetherbeei_contig1460.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1460.2.1
Unique NamemRNA_P-wetherbeei_contig1460.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig1460.2.1 vs. uniprot
Match: A0A835ZF84_9STRA (Ribosomal protein L15 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF84_9STRA)

HSP 1 Score: 360 bits (924), Expect = 4.660e-125
Identity = 172/205 (83.90%), Postives = 189/205 (92.20%), Query Frame = 1 
Query:    1 MGAYKYVEELWRKKQSDVLRFLLRVRAWEYRQLPKLYKCTRPTRTDKAHRLGYKAKQGYSVYRVAVRRGGRKRPNPKGIVYGKPKHHGINKIKFARNLRSVAEERVGARCTNLRVLNSYWINQDATYKYFEVILVDPQHKVIRDDPRINWITRPTMKHRECRGLTSAGRKSRGLHKKGHRANNIIGSSRRSCWKRRNTLSLRRYR 615
            MGAYKY+EELWRKKQSDVLRFLLRVRAWEYRQLPK+YKCT+PTRTDKAHRLGYKAKQGYSV+RVAVRRGGRKRPN KGIVYGKPK+ GI ++KF R+LRSVAEER GA+C N+RVLNSYW+NQDATYKY+EVILVDPQHK IR+D RINWI +P MKHRECRGLTSAGR SRGL K GHRANNIIG S R+ W++RNTLSLRRYR
Sbjct:    1 MGAYKYMEELWRKKQSDVLRFLLRVRAWEYRQLPKVYKCTKPTRTDKAHRLGYKAKQGYSVFRVAVRRGGRKRPNYKGIVYGKPKNQGITQLKFVRSLRSVAEERAGAKCANMRVLNSYWVNQDATYKYYEVILVDPQHKAIRNDSRINWIAKPVMKHRECRGLTSAGRTSRGLRKSGHRANNIIGGSHRAAWRKRNTLSLRRYR 205
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BLAST of mRNA_P-wetherbeei_contig1460.2.1 vs. uniprot
Match: A0A7S2UVW3_9STRA (Ribosomal protein L15 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVW3_9STRA)

HSP 1 Score: 357 bits (917), Expect = 5.430e-124
Identity = 171/205 (83.41%), Postives = 187/205 (91.22%), Query Frame = 1 
Query:    1 MGAYKYVEELWRKKQSDVLRFLLRVRAWEYRQLPKLYKCTRPTRTDKAHRLGYKAKQGYSVYRVAVRRGGRKRPNPKGIVYGKPKHHGINKIKFARNLRSVAEERVGARCTNLRVLNSYWINQDATYKYFEVILVDPQHKVIRDDPRINWITRPTMKHRECRGLTSAGRKSRGLHKKGHRANNIIGSSRRSCWKRRNTLSLRRYR 615
            MGAYKY+EELWRKKQSDVLRFLLRVRAWEYRQLPK+YKCT+PTRTDKAHRLGYKAKQGY VYRVAVRRGGRKRPNPKGIVYGKPKH GIN++KF RNL+SVAE+R G RC NLRVLNSYW+NQDATYKY+EVI+VDPQHKVIR+DPRINW+ +   KHRECRGLTSAGRK RGL KKGHRA+ + GSS R  W RRNTLSL+RYR
Sbjct:    1 MGAYKYLEELWRKKQSDVLRFLLRVRAWEYRQLPKVYKCTKPTRTDKAHRLGYKAKQGYVVYRVAVRRGGRKRPNPKGIVYGKPKHQGINQLKFVRNLQSVAEQRAGKRCANLRVLNSYWVNQDATYKYYEVIMVDPQHKVIRNDPRINWLVKAVHKHRECRGLTSAGRKHRGLRKKGHRAHKLQGSSTRGNWLRRNTLSLKRYR 205
[Close]
BLAST of mRNA_P-wetherbeei_contig1460.2.1 vs. uniprot
Match: D8LNT0_ECTSI (Ribosomal protein L15 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNT0_ECTSI)

HSP 1 Score: 353 bits (906), Expect = 2.580e-122
Identity = 170/205 (82.93%), Postives = 188/205 (91.71%), Query Frame = 1 
Query:    1 MGAYKYVEELWRKKQSDVLRFLLRVRAWEYRQLPKLYKCTRPTRTDKAHRLGYKAKQGYSVYRVAVRRGGRKRPNPKGIVYGKPKHHGINKIKFARNLRSVAEERVGARCTNLRVLNSYWINQDATYKYFEVILVDPQHKVIRDDPRINWITRPTMKHRECRGLTSAGRKSRGLHKKGHRANNIIGSSRRSCWKRRNTLSLRRYR 615
            MGAYKY+EELWRKKQSDVLRF+LRVRAWEYRQLP++ K + PTRTDKAHRLGYKAKQGY++ RVAVRRGGRKRPN KGIVYGKPKHHGINKIK  RNLRSVAEERVGA+ TN+RVLNSYW+NQDAT+KY+EVI VDP H  IR+DPRI WIT+P MKHRECRGLTSAGR+ RGL KKGHRANN+IGSSRR+ WKRRNTLSL+RYR
Sbjct:    1 MGAYKYLEELWRKKQSDVLRFVLRVRAWEYRQLPRVCKVSHPTRTDKAHRLGYKAKQGYTMVRVAVRRGGRKRPNAKGIVYGKPKHHGINKIKAVRNLRSVAEERVGAKFTNMRVLNSYWVNQDATFKYYEVITVDPSHMAIRNDPRIQWITKPVMKHRECRGLTSAGRQHRGLRKKGHRANNLIGSSRRAAWKRRNTLSLKRYR 205
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BLAST of mRNA_P-wetherbeei_contig1460.2.1 vs. uniprot
Match: F0Y8J7_AURAN (Ribosomal protein L15 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y8J7_AURAN)

HSP 1 Score: 345 bits (884), Expect = 5.810e-119
Identity = 163/205 (79.51%), Postives = 185/205 (90.24%), Query Frame = 1 
Query:    1 MGAYKYVEELWRKKQSDVLRFLLRVRAWEYRQLPKLYKCTRPTRTDKAHRLGYKAKQGYSVYRVAVRRGGRKRPNPKGIVYGKPKHHGINKIKFARNLRSVAEERVGARCTNLRVLNSYWINQDATYKYFEVILVDPQHKVIRDDPRINWITRPTMKHRECRGLTSAGRKSRGLHKKGHRANNIIGSSRRSCWKRRNTLSLRRYR 615
            MGAYKY+EE+W++KQ DVLR+L+R+RAW+YRQ  K+ +CTRPTR DKAH+LGYKAK+GY +YR AVRRGGRKRPN KGIVYGKPKH GIN++KFARNL+SVAEERVG +C NLRVLNSYW+NQDATYKY+EVI VDP H VIR+DPRINWI  PT KHRECRGLTSAGRKSRGL K+GHRANNIIGSSRR+ WKRRN LSLRRYR
Sbjct:    1 MGAYKYLEEMWKRKQCDVLRYLMRIRAWQYRQQTKVCRCTRPTRHDKAHKLGYKAKEGYVIYRSAVRRGGRKRPNGKGIVYGKPKHQGINQLKFARNLQSVAEERVGKKCGNLRVLNSYWVNQDATYKYYEVIAVDPSHAVIRNDPRINWIVNPTHKHRECRGLTSAGRKSRGLRKQGHRANNIIGSSRRAAWKRRNNLSLRRYR 205
[Close]
BLAST of mRNA_P-wetherbeei_contig1460.2.1 vs. uniprot
Match: A0A7S2D6X5_9STRA (Ribosomal protein L15 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D6X5_9STRA)

HSP 1 Score: 342 bits (876), Expect = 9.610e-118
Identity = 164/205 (80.00%), Postives = 182/205 (88.78%), Query Frame = 1 
Query:    1 MGAYKYVEELWRKKQSDVLRFLLRVRAWEYRQLPKLYKCTRPTRTDKAHRLGYKAKQGYSVYRVAVRRGGRKRPNPKGIVYGKPKHHGINKIKFARNLRSVAEERVGARCTNLRVLNSYWINQDATYKYFEVILVDPQHKVIRDDPRINWITRPTMKHRECRGLTSAGRKSRGLHKKGHRANNIIGSSRRSCWKRRNTLSLRRYR 615
            MGAYKY+EELWRKKQSDVLRFLLRVRAWEYRQLPK+Y+CT+PTRTDKAHRLGYKAK+GY VYRVAVRRGGRKRPN KG+V+GKPKH GIN++KF RNL+SVAEER+G R  NLRVLNSYW+NQDATYK+FEVILVD QHK +R DP+INW+  P  KHRECRGLTSAGRK+RG  K GHRANN IG S  + WKRRN LSLRRYR
Sbjct:    1 MGAYKYLEELWRKKQSDVLRFLLRVRAWEYRQLPKIYRCTKPTRTDKAHRLGYKAKEGYCVYRVAVRRGGRKRPNHKGMVFGKPKHQGINELKFNRNLQSVAEERIGRRAGNLRVLNSYWVNQDATYKFFEVILVDVQHKTVRVDPKINWLCNPVHKHRECRGLTSAGRKARGFRKGGHRANNRIGGSSFAAWKRRNNLSLRRYR 205
[Close]
BLAST of mRNA_P-wetherbeei_contig1460.2.1 vs. uniprot
Match: F0WIA3_9STRA (Ribosomal protein L15 n=2 Tax=Albugo TaxID=65356 RepID=F0WIA3_9STRA)

HSP 1 Score: 335 bits (858), Expect = 5.500e-115
Identity = 166/205 (80.98%), Postives = 178/205 (86.83%), Query Frame = 1 
Query:    1 MGAYKYVEELWRKKQSDVLRFLLRVRAWEYRQLPKLYKCTRPTRTDKAHRLGYKAKQGYSVYRVAVRRGGRKRPNPKGIVYGKPKHHGINKIKFARNLRSVAEERVGARCTNLRVLNSYWINQDATYKYFEVILVDPQHKVIRDDPRINWITRPTMKHRECRGLTSAGRKSRGLHKKGHRANNIIGSSRRSCWKRRNTLSLRRYR 615
            MGAYKY+EELW++KQSDVLRFL+RVRAWEYRQ P +Y+ TRPTR DKA RLGYKAKQGY + R AVRRGGRKRPN KGIVYGKPKHHGIN++KFARNLRSVAEER GAR TNLRVLNSYWINQDATYKYFEVI+VD  HKVIR DPRINWI  PT K RE RGLTSAGR+ RGL K+GHRAN I G S R  WKRRNTLSLRRYR
Sbjct:    1 MGAYKYLEELWKRKQSDVLRFLIRVRAWEYRQQPVIYRTTRPTRIDKARRLGYKAKQGYVIVRAAVRRGGRKRPNSKGIVYGKPKHHGINQLKFARNLRSVAEERAGARFTNLRVLNSYWINQDATYKYFEVIMVDHSHKVIRQDPRINWIVNPTHKRREKRGLTSAGRQGRGLRKRGHRANKIQGGSSRHNWKRRNTLSLRRYR 205
[Close]
BLAST of mRNA_P-wetherbeei_contig1460.2.1 vs. uniprot
Match: A0A7S1UIX1_9STRA (Ribosomal protein L15 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UIX1_9STRA)

HSP 1 Score: 333 bits (853), Expect = 3.070e-114
Identity = 159/202 (78.71%), Postives = 180/202 (89.11%), Query Frame = 1 
Query:    1 MGAYKYVEELWRKKQSDVLRFLLRVRAWEYRQLPKLYKCTRPTRTDKAHRLGYKAKQGYSVYRVAVRRGGRKRPNPKGIVYGKPKHHGINKIKFARNLRSVAEERVGARCTNLRVLNSYWINQDATYKYFEVILVDPQHKVIRDDPRINWITRPTMKHRECRGLTSAGRKSRGLHKKGHRANNIIGSSRRSCWKRRNTLSLR 606
            MGAYKY+EELWRKKQSDVLRFLLRVRAWEYRQLP++    RPTRT+KAHRLGYKAKQGY++ RVAVRRGGRKRPN KGIV+GKPKHHGIN +KFARNL+SVAEER G +  NLRVLNSYW+NQDATYKY+EVI+VDP H  IR+DPRINWI  PTMKHRE RGLTSAGRK+RG+ +KGH+ANNIIG S ++ WKRRNTL L+
Sbjct:    1 MGAYKYLEELWRKKQSDVLRFLLRVRAWEYRQLPRVMSLHRPTRTEKAHRLGYKAKQGYTIVRVAVRRGGRKRPNNKGIVFGKPKHHGINHLKFARNLQSVAEERAGRKAANLRVLNSYWVNQDATYKYYEVIMVDPSHNAIRNDPRINWIVAPTMKHRENRGLTSAGRKARGMRQKGHKANNIIGGSWKAAWKRRNTLKLK 202
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BLAST of mRNA_P-wetherbeei_contig1460.2.1 vs. uniprot
Match: A0A7S4UGY1_9DINO (Ribosomal protein L15 n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4UGY1_9DINO)

HSP 1 Score: 332 bits (852), Expect = 4.360e-114
Identity = 163/205 (79.51%), Postives = 178/205 (86.83%), Query Frame = 1 
Query:    1 MGAYKYVEELWRKKQSDVLRFLLRVRAWEYRQLPKLYKCTRPTRTDKAHRLGYKAKQGYSVYRVAVRRGGRKRPNPKGIVYGKPKHHGINKIKFARNLRSVAEERVGARCTNLRVLNSYWINQDATYKYFEVILVDPQHKVIRDDPRINWITRPTMKHRECRGLTSAGRKSRGLHKKGHRANNIIGSSRRSCWKRRNTLSLRRYR 615
            MGAYKY+EELWRKKQSDVLRFLLRVRAWEYRQ+PK+    RPTRTDKAHRLG+KAKQG+ VYRVAVRRGGRKRPNPKG+V+GKPKH GIN++KFARNL+SVAEER G RC NLRVLNSYWINQDATYKYFEVI+VDP HK IR+DPRINWI +   KHRE RGLTSAGRK RGL K GHRA  I G S R+ WKRRN  S+RRYR
Sbjct:    1 MGAYKYLEELWRKKQSDVLRFLLRVRAWEYRQMPKIKALHRPTRTDKAHRLGFKAKQGFVVYRVAVRRGGRKRPNPKGMVHGKPKHQGINQLKFARNLQSVAEERAGKRCANLRVLNSYWINQDATYKYFEVIMVDPNHKAIREDPRINWICKAVHKHRENRGLTSAGRKGRGLRKSGHRATKIQGGSTRANWKRRNQESMRRYR 205
[Close]
BLAST of mRNA_P-wetherbeei_contig1460.2.1 vs. uniprot
Match: W7U484_9STRA (Ribosomal protein L15 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U484_9STRA)

HSP 1 Score: 332 bits (852), Expect = 4.360e-114
Identity = 160/205 (78.05%), Postives = 181/205 (88.29%), Query Frame = 1 
Query:    1 MGAYKYVEELWRKKQSDVLRFLLRVRAWEYRQLPKLYKCTRPTRTDKAHRLGYKAKQGYSVYRVAVRRGGRKRPNPKGIVYGKPKHHGINKIKFARNLRSVAEERVGARCTNLRVLNSYWINQDATYKYFEVILVDPQHKVIRDDPRINWITRPTMKHRECRGLTSAGRKSRGLHKKGHRANNIIGSSRRSCWKRRNTLSLRRYR 615
            MGAYK++EELWRKKQ+D+LRFLLRVRAWEYRQLPK+Y+  RPTRTDKAHRLGYKAKQG+ VYRVAVRRGGRKRPNPKGIVYGKPK+ GIN++K+ RNL+S AEER G +   LRVLNSYW+NQDATYKY+EVILVDPQHK IR D R+NWI  PT KHRE RGLTS+GR SRGL K+GHRA+NIIGSS    WKRRNT+SL+RYR
Sbjct:    1 MGAYKFLEELWRKKQADLLRFLLRVRAWEYRQLPKIYRMNRPTRTDKAHRLGYKAKQGFVVYRVAVRRGGRKRPNPKGIVYGKPKNQGINQLKWVRNLKSKAEERAGRKLGGLRVLNSYWVNQDATYKYYEVILVDPQHKAIRRDARVNWIVNPTHKHRELRGLTSSGRSSRGLRKRGHRAHNIIGSSAYGSWKRRNTISLKRYR 205
[Close]
BLAST of mRNA_P-wetherbeei_contig1460.2.1 vs. uniprot
Match: A0A8J2X0T5_9STRA (Ribosomal protein L15 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X0T5_9STRA)

HSP 1 Score: 331 bits (849), Expect = 1.250e-113
Identity = 158/205 (77.07%), Postives = 181/205 (88.29%), Query Frame = 1 
Query:    1 MGAYKYVEELWRKKQSDVLRFLLRVRAWEYRQLPKLYKCTRPTRTDKAHRLGYKAKQGYSVYRVAVRRGGRKRPNPKGIVYGKPKHHGINKIKFARNLRSVAEERVGARCTNLRVLNSYWINQDATYKYFEVILVDPQHKVIRDDPRINWITRPTMKHRECRGLTSAGRKSRGLHKKGHRANNIIGSSRRSCWKRRNTLSLRRYR 615
            MGAYKY+EELW+KKQ DVLR+L+R+RAWEYRQ  K+ + TRPTR DKAH+LGYKAK+GY+++R AVRRG RKRP  +G+VYGKPKH GIN+IKFARNL++VAEERVG +  NLRVLNSYW+NQDATYKY+EVI VDP H+VIR+DPRINWI   T KHRECRGLTSAGRKSRGL KKGHRANN+IGSSRR  WKRRN LSLRRYR
Sbjct:    1 MGAYKYLEELWKKKQCDVLRYLMRIRAWEYRQQTKVCRVTRPTRHDKAHKLGYKAKEGYAIFRSAVRRGSRKRPTHRGVVYGKPKHQGINQIKFARNLQAVAEERVGKKAANLRVLNSYWVNQDATYKYYEVICVDPSHQVIRNDPRINWICGATHKHRECRGLTSAGRKSRGLRKKGHRANNLIGSSRRGAWKRRNNLSLRRYR 205
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1460.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZF84_9STRA4.660e-12583.90Ribosomal protein L15 n=2 Tax=Tribonema minus TaxI... [more]
A0A7S2UVW3_9STRA5.430e-12483.41Ribosomal protein L15 n=1 Tax=Fibrocapsa japonica ... [more]
D8LNT0_ECTSI2.580e-12282.93Ribosomal protein L15 n=2 Tax=Ectocarpus TaxID=287... [more]
F0Y8J7_AURAN5.810e-11979.51Ribosomal protein L15 n=1 Tax=Aureococcus anophage... [more]
A0A7S2D6X5_9STRA9.610e-11880.00Ribosomal protein L15 n=1 Tax=Florenciella parvula... [more]
F0WIA3_9STRA5.500e-11580.98Ribosomal protein L15 n=2 Tax=Albugo TaxID=65356 R... [more]
A0A7S1UIX1_9STRA3.070e-11478.71Ribosomal protein L15 n=1 Tax=Phaeomonas parva Tax... [more]
A0A7S4UGY1_9DINO4.360e-11479.51Ribosomal protein L15 n=1 Tax=Alexandrium monilatu... [more]
W7U484_9STRA4.360e-11478.05Ribosomal protein L15 n=2 Tax=Monodopsidaceae TaxI... [more]
A0A8J2X0T5_9STRA1.250e-11377.07Ribosomal protein L15 n=1 Tax=Pelagomonas calceola... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1460contigP-wetherbeei_contig1460:4124..5555 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LNT0
Preferred nameRPL15
PFAMsRibosomal_L15e
Model size618
Max annot lvl2759|Eukaryota
KEGG koko:K02877,ko:K15276
KEGG TC2.A.7.11.2,2.A.7.11.3
KEGG Pathwayko03010,map03010
KEGG ModuleM00177,M00179
Hectar predicted targeting categoryother localisation
GOsGO:0000184,GO:0000956,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006914,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009636,GO:0009892,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0015031,GO:0015833,GO:0015934,GO:0016070,GO:0016071,GO:0016236,GO:0019222,GO:0019439,GO:0019538,GO:0022625,GO:0022626,GO:0030016,GO:0030017,GO:0031672,GO:0031974,GO:0031981,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0034641,GO:0034645,GO:0034655,GO:0042221,GO:0042493,GO:0042886,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043292,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044445,GO:0044446,GO:0044449,GO:0044464,GO:0045047,GO:0045184,GO:0045471,GO:0046483,GO:0046677,GO:0046700,GO:0046907,GO:0048519,GO:0050789,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0060255,GO:0061919,GO:0065007,GO:0070013,GO:0070727,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0090304,GO:0097159,GO:0097305,GO:0099080,GO:0099081,GO:0099512,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901700,GO:1990904
Exons3
Evalue4.23e-123
EggNOG OGsCOG1632@1|root,KOG1678@2759|Eukaryota
Ec32 ortholog descriptionRibosomal protein L15e
Ec32 orthologEc-08_005940.1
Descriptionstructural constituent of ribosome
Cds size618
COG categoryJ
BRITEbr01610,ko00000,ko00001,ko00002,ko02000,ko03011
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186027.3450649-CDS-P-wetherbeei_contig1460:4123..43721683186027.3450649-CDS-P-wetherbeei_contig1460:4123..4372Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1460 4124..4372 -
1683186027.3557258-CDS-P-wetherbeei_contig1460:4879..50771683186027.3557258-CDS-P-wetherbeei_contig1460:4879..5077Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1460 4880..5077 -
1683186027.366094-CDS-P-wetherbeei_contig1460:5384..55551683186027.366094-CDS-P-wetherbeei_contig1460:5384..5555Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1460 5385..5555 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1460.2.1prot_P-wetherbeei_contig1460.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1460 4124..5555 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1460.2.1

>prot_P-wetherbeei_contig1460.2.1 ID=prot_P-wetherbeei_contig1460.2.1|Name=mRNA_P-wetherbeei_contig1460.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=206bp
MGAYKYVEELWRKKQSDVLRFLLRVRAWEYRQLPKLYKCTRPTRTDKAHR
LGYKAKQGYSVYRVAVRRGGRKRPNPKGIVYGKPKHHGINKIKFARNLRS
VAEERVGARCTNLRVLNSYWINQDATYKYFEVILVDPQHKVIRDDPRINW
ITRPTMKHRECRGLTSAGRKSRGLHKKGHRANNIIGSSRRSCWKRRNTLS
LRRYR*
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mRNA from alignment at P-wetherbeei_contig1460:4124..5555-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1460.2.1 ID=mRNA_P-wetherbeei_contig1460.2.1|Name=mRNA_P-wetherbeei_contig1460.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1432bp|location=Sequence derived from alignment at P-wetherbeei_contig1460:4124..5555- (Phaeothamnion wetherbeei SAG_119_79)
ATGGGTGCATACAAGTACGTGGAGGAGCTGTGGCGGAAGAAGCAGAGCGA
TGTACTCCGCTTCTTACTGCGCGTCCGCGCCTGGGAGTACCGCCAGCTTC
CCAAGCTCTACAAATGCACGCGGCCCACCCGGACGGACAAGGCGCACCGC
CTCGGCTACAAGGCGAAGCAGGTGCGTCGCAGGGGGCGCGGGCTCTCCGG
TCCCTTGCCTTTTGGGGAATGAAAATCGACGGTGTGCGCTAGGGATGAGC
CTGAGATCTGTTTAACTTTTTGAGGGGGGACAAATTGCATAGCTACTGGT
TCGTGCCTCGATGCACATCGCACGTAGATGCGCTGCCATGGCTTCGTTTG
GGCTCCCAGATGTACAAGTCCCTCGTTCAGGGTTCTGCCCTACTCCTTCT
TTTGGCAAGGTCCCTTATGCTATCGCAAGGCACTGAGCCATCTCTACGTT
CCTGTAACCTCGTGGTGCTGTGATGCAGGGCTACTCCGTGTACCGGGTGG
CCGTGCGTCGGGGCGGGCGTAAGCGGCCCAACCCGAAGGGCATTGTCTAC
GGAAAGCCCAAGCACCACGGCATTAACAAGATCAAGTTCGCCCGGAACTT
GCGCTCGGTGGCGGAGGAGCGCGTCGGCGCCCGCTGCACCAACCTTCGCG
TGCTGAACTCGTACTGGATCAACCAGGTCGATTTATTATGCTGCGACATC
TTTGGAAATGCCTACAAAAGACAGGACTTTGCGGCAATATATCGATGGCT
CGTTTGAGGATCTTTCTTGGGGCTGTGGCGAGACGGCGTGGCAGCTGCTC
CGGGGTCCTTTTCCAAATTCTGAAACTTTTGCAGCGTTGCTGAAGCAGCC
TTTCTCGCGCTCGTTCCATTTACTTTCCTTCCTCTTTGTCTGAAAGAGTC
GAATGGAATTTTTGGTTCAAAGTTGGACGCAAAGTGCGCTCGACACTCTT
AAATGAATGATTCGGAATTGTTTGAGTCGGCAGGTTTCTTCTTCTTGTTT
TCAATTCCTCTGCGTTCTCCATTTGCCTTTGCTTAATCTCGAGGAATTCC
TAGTAATGCCCACGCAGTGTGGGTAGACCCTTCGTTCTTCGATGCCGTTC
CGCTTCATGTTCCTCGATCCATCCTTTCTGCTGTCCCTCTTCTTTGCTAC
TGCCTCGTCTGAATCTCCCTCTCTCTTTCTCAGGACGCGACGTACAAGTA
CTTCGAGGTGATCCTCGTGGACCCGCAGCACAAGGTCATCCGCGATGACC
CGCGTATCAACTGGATCACGCGGCCGACCATGAAGCACCGCGAGTGCCGC
GGCCTCACGTCTGCCGGCCGCAAGAGCCGCGGCCTCCACAAGAAGGGCCA
CCGCGCCAACAACATCATCGGCTCGTCGCGCCGCTCCTGCTGGAAGCGCC
GCAACACGCTCAGCCTGCGCCGCTACCGCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1460:4124..5555-

>mRNA_P-wetherbeei_contig1460.2.1 ID=mRNA_P-wetherbeei_contig1460.2.1|Name=mRNA_P-wetherbeei_contig1460.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=618bp|location=Sequence derived from alignment at P-wetherbeei_contig1460:4124..5555- (Phaeothamnion wetherbeei SAG_119_79)
ATGGGTGCATACAAGTACGTGGAGGAGCTGTGGCGGAAGAAGCAGAGCGA
TGTACTCCGCTTCTTACTGCGCGTCCGCGCCTGGGAGTACCGCCAGCTTC
CCAAGCTCTACAAATGCACGCGGCCCACCCGGACGGACAAGGCGCACCGC
CTCGGCTACAAGGCGAAGCAGGGCTACTCCGTGTACCGGGTGGCCGTGCG
TCGGGGCGGGCGTAAGCGGCCCAACCCGAAGGGCATTGTCTACGGAAAGC
CCAAGCACCACGGCATTAACAAGATCAAGTTCGCCCGGAACTTGCGCTCG
GTGGCGGAGGAGCGCGTCGGCGCCCGCTGCACCAACCTTCGCGTGCTGAA
CTCGTACTGGATCAACCAGGACGCGACGTACAAGTACTTCGAGGTGATCC
TCGTGGACCCGCAGCACAAGGTCATCCGCGATGACCCGCGTATCAACTGG
ATCACGCGGCCGACCATGAAGCACCGCGAGTGCCGCGGCCTCACGTCTGC
CGGCCGCAAGAGCCGCGGCCTCCACAAGAAGGGCCACCGCGCCAACAACA
TCATCGGCTCGTCGCGCCGCTCCTGCTGGAAGCGCCGCAACACGCTCAGC
CTGCGCCGCTACCGCTGA
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