mRNA_P-wetherbeei_contig1458.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1458.1.2
Unique NamemRNA_P-wetherbeei_contig1458.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1458.1.2 vs. uniprot
Match: A0A7R9U6Q5_9STRA (B-related factor 1 (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6Q5_9STRA)

HSP 1 Score: 143 bits (360), Expect = 2.750e-36
Identity = 82/196 (41.84%), Postives = 110/196 (56.12%), Query Frame = 1
Query:   28 CGGCELYDGWPDETAGNVVCNSCGRVLEQDAIVSTVEFSETNGQSAVVGQFVSSTCTRPYGTGRGGHSRYGYAMSRAPREQTLKTGSQLINSAAMRLQLKAPTTERAIRCFKLAVEHKFCQGRKSQLVAAACAYIACREANLPVMLLDISDVVGENVFHLGDCYRKLVDPSVPTLTLADPVLFVDRFASMLQLGDK 615
            C  C   +   ++  G+ VC  CG V+E++AIVS++EF ET G   V GQF+S+T  +PY +   G  RY Y  SR  R+ TL  G + I   A  L+L A  TE A R F +AV+  F QGRK+  V AAC YI CR+   P +L+D SD +  NVF LG  + K        L + DP L++ RFA+ L  G K
Sbjct:   16 CPECASLEIEVNDAGGDAVCVRCGTVVEENAIVSSIEFEETGG---VRGQFMSATAQKPYSSSVRGRGRYSY--SRDSRDTTLANGRRQIGQVASALRLNAHFTENAHRLFTIAVQRSFVQGRKTMRVVAACLYIVCRQERAPYLLIDFSDALQINVFKLGATFMKFKKLLNLKLPIVDPGLYIHRFAAKLNFGKK 206          
BLAST of mRNA_P-wetherbeei_contig1458.1.2 vs. uniprot
Match: A0A6H5L6K7_9PHAE (TFIIB-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6K7_9PHAE)

HSP 1 Score: 140 bits (353), Expect = 6.740e-35
Identity = 84/215 (39.07%), Postives = 118/215 (54.88%), Query Frame = 1
Query:    1 MAAPLKGAW----CGGCELYDGWPDETAGNVVCNSCGRVLEQDAIVSTVEFSETNGQSAVVGQFVSSTCTRPYGTGRG-GHSRYGYAMSRAPREQTLKTGSQLINSAAMRLQLKAPTTERAIRCFKLAVEHKFCQGRKSQLVAAACAYIACREANLPVMLLDISDVVGENVFHLGDCYRKLV-----DPSVPTLTLADPVLFVDRFASMLQLGDK 615
            M AP  G      CGG    D      +G+  C  CG V++++ IVS+V+FSE+ G S VVGQFVS    RP G G   G  R+G   SR  R+ T++ G + I     +L L+    + A R F L V   + QGRK+  + AAC YI CR+ + P+ML+DISD +  NV+ LG  ++KL+        VP   + DP +++ RFA+ L LG K
Sbjct:   15 MTAPQDGGTRCPSCGGTNFMD---QPGSGDRACAECGTVVQENNIVSSVQFSESGGSSNVVGQFVSGDRGRPSGGGAARGRGRFG--QSRDSRDATIQNGKKKIIQVLAQLHLRTTLADEAARLFALCVTQNYVQGRKTMNIVAACVYIVCRQNHFPIMLIDISDKLAVNVYVLGKTFQKLIKHLNLQTQVP---IVDPAMYIKRFAAKLDLGSK 221          
BLAST of mRNA_P-wetherbeei_contig1458.1.2 vs. uniprot
Match: A0A7S0LNL5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LNL5_9EUKA)

HSP 1 Score: 130 bits (328), Expect = 1.770e-34
Identity = 79/179 (44.13%), Postives = 100/179 (55.87%), Query Frame = 1
Query:   82 VCNSCGRVLEQDAIVSTVEFSE-TNGQSAVVGQFVSSTCTRPYGTGRGGHSRYGYAMSRAPREQTLKTGSQLINSAAMRLQLKAPTTERAIRCFKLAVEHKFCQGRKSQLVAAACAYIACREANLPVMLLDISDVVGENVFHLGDCYRKLVDPSVPTLTLADPVLFVDRFASMLQLGDK 615
            VC  CG VLE++AIV+ V F++ + G S+VVGQFVSST          G    G   SR  RE     G + I+  A  L+L     E A R F LAV+H F QGRK+Q V AAC Y  CR      +L+D SDV+  NV+ LG C+ K       TL + DP L++ RFAS L+ GDK
Sbjct:    2 VCIQCGNVLEENAIVNEVTFAQDSGGGSSVVGQFVSSTP---------GVRSAGLGFSREGREVAFSNGQRHISQLAAALRLAEHHQEAAQRLFMLAVQHNFIQGRKTQHVIAACLYTVCRREKTAHLLIDYSDVLQTNVYMLGSCFLKFTRMLSLTLPIIDPSLYIHRFASKLEFGDK 171          
BLAST of mRNA_P-wetherbeei_contig1458.1.2 vs. uniprot
Match: W7TP75_9STRA (Transcription factor iiib 90 kDa subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TP75_9STRA)

HSP 1 Score: 138 bits (348), Expect = 2.160e-34
Identity = 79/198 (39.90%), Postives = 112/198 (56.57%), Query Frame = 1
Query:   28 CGGCELYDGWPDETAGNVVCNSCGRVLEQDAIVSTVEFSETN--GQSAVVGQFVSSTCTRPYGTGRGGHSRYGYAMSRAPREQTLKTGSQLINSAAMRLQLKAPTTERAIRCFKLAVEHKFCQGRKSQLVAAACAYIACREANLPVMLLDISDVVGENVFHLGDCYRKLVDPSVPTLTLADPVLFVDRFASMLQLGDK 615
            C G +L    PD   G  +C +C  ++E++AIVS+VEF+E N  G S VVGQFV    T+ Y +   G  R+    +R  R+ TL  G + I     +L+L+    +RA R F+ AVE  F QGRK+  V A C Y+ CRE N P ML+D SD V  NV+ LG  + K    +   L + DP +++ RFA+ L+LG +
Sbjct:   43 CRGTDLEYSEPD---GATICMACHTIVEENAIVSSVEFNENNAGGASTVVGQFVGPEMTKAYSSAGRGRRRF---YTRDSRDTTLNNGRRAIQQVVSQLRLRQAFVDRACRLFRTAVERNFVQGRKTMCVVAVCLYMVCREDNSPHMLIDFSDAVQINVYVLGHAFLKFKQLTGLNLAVIDPSIYIHRFAARLELGSE 234          
BLAST of mRNA_P-wetherbeei_contig1458.1.2 vs. uniprot
Match: F0YC94_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YC94_AURAN)

HSP 1 Score: 138 bits (348), Expect = 3.150e-34
Identity = 86/209 (41.15%), Postives = 122/209 (58.37%), Query Frame = 1
Query:   28 CGGCELYDGWPDETAGNVVCNSCGRVLEQDAIVSTVEFSETNG-QSAVVGQFVSSTCTRPYG---------TGRGGHSRYGYAMSRAPREQTLKTGSQLINSAAMRLQLKAPTTERAIRCFKLAVEHKFCQGRKSQLVAAACAYIACREANLPVMLLDISDVVGENVFHLGDCY---RKLVDPSVPTLTLADPVLFVDRFASMLQLGDK 615
            CG  ++   W  E  G+ VC  CG V E+  IVS++EF+E+ G  S+VVGQFVS++CT+P+G         +  GG  RYG+   R+ RE TL TG + I   A  L+L A   + A R F +A +  F QGRK+  V  AC Y+ CR      ML+D SDV+  NV+ LG  +   R+L++  +P +   DP L++ RFA+ L+LGDK
Sbjct:  397 CGSIDID--W-QEAGGDAVCVRCGTVCEESTIVSSIEFAESGGGASSVVGQFVSASCTKPFGGLGGSGWGGSRGGGRPRYGFL--RSSRETTLATGRRKIAQVASSLRLGAHFVDGAHRLFGMAAQRNFTQGRKTLHVVCACLYVMCRREKSAHMLIDFSDVLQVNVYALGATFLKFRRLLNLELPII---DPSLYIHRFAAKLELGDK 597          
BLAST of mRNA_P-wetherbeei_contig1458.1.2 vs. uniprot
Match: A0A8J6BZU8_DIALT (B-related factor 1 n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6BZU8_DIALT)

HSP 1 Score: 138 bits (347), Expect = 3.970e-34
Identity = 83/186 (44.62%), Postives = 108/186 (58.06%), Query Frame = 1
Query:   61 DETAGNVVCNSCGRVLEQDAIVSTVEFSE-TNGQSAVVGQFVSSTCTRPYGTGRGGHSRYGYAMSRAPREQTLKTGSQLINSAAMRLQLKAPTTERAIRCFKLAVEHKFCQGRKSQLVAAACAYIACREANLPVMLLDISDVVGENVFHLGDCYRKLVDPSVPTLTLADPVLFVDRFASMLQLGDK 615
            D   G+ VC +CG V+E++ IVS V+F+E  NG S+VVGQF+SS      GTG         + ++  RE T+  G + I+  A  L L +   E A R F LAV+H F QGR++Q V AAC YI CR    P ML+D SDV+  NVF LG  + K        L L DP L++ RFAS L+LGDK
Sbjct:   15 DAAKGDTVCVNCGTVIEENTIVSEVQFAEDANGASSVVGQFISSN-----GTGMSS------SFAKESREITISNGRRKISHIAGALSLNSHHVEAAQRFFLLAVQHNFIQGRRTQHVVAACLYIVCRREKTPHMLIDFSDVLQTNVFALGSTFLKFTRLLNLQLPLIDPSLYIHRFASRLELGDK 189          
BLAST of mRNA_P-wetherbeei_contig1458.1.2 vs. uniprot
Match: A0A448Z1B8_9STRA (B-related factor 1 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z1B8_9STRA)

HSP 1 Score: 137 bits (345), Expect = 4.200e-34
Identity = 81/183 (44.26%), Postives = 107/183 (58.47%), Query Frame = 1
Query:   70 AGNVVCNSCGRVLEQDAIVSTVEFSE-TNGQSAVVGQFVSSTCTRPYGTGRGGHSRYGYAMSRAPREQTLKTGSQLINSAAMRLQLKAPTTERAIRCFKLAVEHKFCQGRKSQLVAAACAYIACREANLPVMLLDISDVVGENVFHLGDCYRKLVDPSVPTLTLADPVLFVDRFASMLQLGDK 615
            AGN VC  CG ++E++AIVS +EF E   G S++VGQFVS+T  + Y  G  G   YG+  SR  RE TL  G + I   A RL+L     + A R F +AVE  F QGR++  V AAC YI+CR+     ML+D SD +  NV+ LG C+ K        L + DP L++ RFA+ L L DK
Sbjct:   20 AGNCVCTECGVIVEENAIVSHMEFVEGAGGSSSMVGQFVSATSRKAYTGGGRGAGNYGF--SRDSRETTLANGRRRIQEVASRLRLGGHYVDAAHRLFTIAVEKNFVQGRRTIHVVAACLYISCRQEKSQHMLIDFSDALQVNVYTLGTCFLKFRRLLGLKLAILDPALYIYRFAAHLDLDDK 200          
BLAST of mRNA_P-wetherbeei_contig1458.1.2 vs. uniprot
Match: A0A1E7FX19_9STRA (B-related factor 1 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FX19_9STRA)

HSP 1 Score: 134 bits (337), Expect = 1.410e-33
Identity = 86/206 (41.75%), Postives = 112/206 (54.37%), Query Frame = 1
Query:    1 MAAPLKGAWCGGCELYDGWPDETAGNVVCNSCGRVLEQDAIVSTVEFSE-TNGQSAVVGQFVSSTCTRPYGTGRGGHSRYGYAMSRAPREQTLKTGSQLINSAAMRLQLKAPTTERAIRCFKLAVEHKFCQGRKSQLVAAACAYIACREANLPVMLLDISDVVGENVFHLGDCYRKLVDPSVPTLTLADPVLFVDRFASMLQLGDK 615
            MA    G  C  C          +G  VC  CG +LE++AIVS VEF E   G S++VGQFVS+T  + Y TG GG +   Y  SR  RE TL  G + I   A RL+L     + A R F +AVE  F QGR++  V AAC YI+CR+     ML+D SD +  NV+ LG C+ K        L + DP L++ RFA+ L L D+
Sbjct:    1 MADSSGGPVCPNCGSKHIELQGASGASVCTECGVILEENAIVSNVEFVEGQGGASSMVGQFVSATSRKAY-TG-GGRAGGNYGFSRDSRETTLANGRRKIQEVASRLRLGGHYVDSAHRLFTIAVEKNFVQGRRTIHVVAACLYISCRQEKSQHMLIDFSDALQVNVYTLGTCFLKFRRLLGLKLAILDPALYIYRFAAHLDLNDQ 204          
BLAST of mRNA_P-wetherbeei_contig1458.1.2 vs. uniprot
Match: B7GD27_PHATC (B-related factor 1 n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GD27_PHATC)

HSP 1 Score: 135 bits (340), Expect = 1.780e-33
Identity = 86/211 (40.76%), Postives = 114/211 (54.03%), Query Frame = 1
Query:    7 APLKGAWCGGCELYDGWPDETAGNVVCNSCGRVLEQDAIVSTVEFSE-TNGQSAVVGQFVSSTCTRPYGTGRGGHS-------RYGYAMSRAPREQTLKTGSQLINSAAMRLQLKAPTTERAIRCFKLAVEHKFCQGRKSQLVAAACAYIACREANLPVMLLDISDVVGENVFHLGDCYRKLVDPSVPTLTLADPVLFVDRFASMLQLGDK 615
            A     +C  C        + +G  VC  CG V+E++AIVS VEF E   G S++VGQFVS+T ++ Y  G GG         RYG+  SR  RE TL  G + I   A RL+L     + A R F +AVE  F QGR++  V AAC YIACR+     ML+D SD +  NV+ LG C+ K        L + DP L++ RFA+ L L +K
Sbjct:   62 ASTMSIFCPNCGSTSIEQHDASGASVCTECGVVVEENAIVSAVEFVEGAGGASSMVGQFVSATSSKAYTGGPGGXXXXXXXXXRYGF--SRDSRETTLANGRRRIQEVASRLRLGTHFVDAAHRLFTIAVERNFVQGRRTTHVVAACLYIACRQEKSQHMLIDFSDALQVNVYTLGTCFLKFRRLLGLKLEIIDPALYIYRFAAHLDLDEK 270          
BLAST of mRNA_P-wetherbeei_contig1458.1.2 vs. uniprot
Match: A0A0M0JU91_9EUKA (Brf1 subunit of RNA polymerase iii transcription initiation factor iiib n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JU91_9EUKA)

HSP 1 Score: 132 bits (332), Expect = 2.350e-33
Identity = 83/197 (42.13%), Postives = 109/197 (55.33%), Query Frame = 1
Query:   28 CGGCELYDGWPDETAGNVVCNSCGRVLEQDAIVSTVEFSE-TNGQSAVVGQFVSSTCTRPYGTGRGGHSRYGYAMSRAPREQTLKTGSQLINSAAMRLQLKAPTTERAIRCFKLAVEHKFCQGRKSQLVAAACAYIACREANLPVMLLDISDVVGENVFHLGDCYRKLVDPSVPTLTLADPVLFVDRFASMLQLGDK 615
            C  C   D   D   G+ VC  CG VLE++AIV+ V F++   G S VVGQ+V++T     G G  G    G+  SR   E     G + I+  A  L+L     E A R F LAV+H F QGR++Q V AAC Y  CR+   P +L+D SDV+ ENV+ LG C+ K       TL + DP L++ RFAS L+ GDK
Sbjct:    6 CPNCGSTDIETDAQRGDAVCIQCGTVLEENAIVNEVTFAQDAGGGSQVVGQYVAATP----GVGSSG---LGFKESR---ELAFNNGQRHISQLAAALRLAEHHQEAAQRLFMLAVQHNFIQGRRTQHVIAACLYTVCRKEKTPHLLIDYSDVLQENVYLLGSCFLKFTRLLSLTLPIIDPSLYIHRFASRLEFGDK 192          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1458.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7R9U6Q5_9STRA2.750e-3641.84B-related factor 1 (Fragment) n=1 Tax=Pinguiococcu... [more]
A0A6H5L6K7_9PHAE6.740e-3539.07TFIIB-type domain-containing protein n=2 Tax=Ectoc... [more]
A0A7S0LNL5_9EUKA1.770e-3444.13Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
W7TP75_9STRA2.160e-3439.90Transcription factor iiib 90 kDa subunit n=2 Tax=M... [more]
F0YC94_AURAN3.150e-3441.15Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A8J6BZU8_DIALT3.970e-3444.62B-related factor 1 n=2 Tax=Diacronema lutheri TaxI... [more]
A0A448Z1B8_9STRA4.200e-3444.26B-related factor 1 n=1 Tax=Pseudo-nitzschia multis... [more]
A0A1E7FX19_9STRA1.410e-3341.75B-related factor 1 n=1 Tax=Fragilariopsis cylindru... [more]
B7GD27_PHATC1.780e-3340.76B-related factor 1 n=1 Tax=Phaeodactylum tricornut... [more]
A0A0M0JU91_9EUKA2.350e-3342.13Brf1 subunit of RNA polymerase iii transcription i... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1458contigP-wetherbeei_contig1458:989..2619 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LS89
Preferred nameBRF1
PFAMsBRF1,TFIIB,TF_Zn_Ribbon
Model size615
Max annot lvl2759|Eukaryota
KEGG koko:K15196
Hectar predicted targeting categoryother localisation
GOsGO:0000126,GO:0000976,GO:0000992,GO:0000994,GO:0000995,GO:0001006,GO:0001016,GO:0001025,GO:0001032,GO:0001067,GO:0001112,GO:0001120,GO:0001156,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0006139,GO:0006259,GO:0006351,GO:0006352,GO:0006355,GO:0006359,GO:0006383,GO:0006384,GO:0006399,GO:0006725,GO:0006807,GO:0008134,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009303,GO:0009304,GO:0009889,GO:0009891,GO:0009893,GO:0009894,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015074,GO:0016043,GO:0016070,GO:0016072,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019899,GO:0022607,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031974,GO:0031981,GO:0032091,GO:0032196,GO:0032774,GO:0032991,GO:0034367,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0043170,GO:0043175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043393,GO:0043487,GO:0043488,GO:0043496,GO:0043565,GO:0043933,GO:0044085,GO:0044092,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0044798,GO:0045893,GO:0045935,GO:0045945,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051098,GO:0051100,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0061013,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070063,GO:0070893,GO:0070897,GO:0070898,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090074,GO:0090304,GO:0090576,GO:0097159,GO:0097659,GO:0098781,GO:0140110,GO:0140223,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902680,GO:1903311,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141
Exons4
Evalue1.1e-35
EggNOG OGsCOG1405@1|root,KOG1598@2759|Eukaryota
DescriptionRNA polymerase III type 3 promoter DNA binding
Cds size615
COG categoryK
BRITEko00000,ko03021
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186026.7092104-CDS-P-wetherbeei_contig1458:988..10751683186026.7092104-CDS-P-wetherbeei_contig1458:988..1075Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1458 989..1075 -
1683186026.7252753-CDS-P-wetherbeei_contig1458:1515..15961683186026.7252753-CDS-P-wetherbeei_contig1458:1515..1596Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1458 1516..1596 -
1683186026.733647-CDS-P-wetherbeei_contig1458:1983..21271683186026.733647-CDS-P-wetherbeei_contig1458:1983..2127Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1458 1984..2127 -
1683186026.7424734-CDS-P-wetherbeei_contig1458:2316..26191683186026.7424734-CDS-P-wetherbeei_contig1458:2316..2619Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1458 2317..2619 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1458.1.2prot_P-wetherbeei_contig1458.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1458 989..2619 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1458.1.2

>prot_P-wetherbeei_contig1458.1.2 ID=prot_P-wetherbeei_contig1458.1.2|Name=mRNA_P-wetherbeei_contig1458.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=205bp
MAAPLKGAWCGGCELYDGWPDETAGNVVCNSCGRVLEQDAIVSTVEFSET
NGQSAVVGQFVSSTCTRPYGTGRGGHSRYGYAMSRAPREQTLKTGSQLIN
SAAMRLQLKAPTTERAIRCFKLAVEHKFCQGRKSQLVAAACAYIACREAN
LPVMLLDISDVVGENVFHLGDCYRKLVDPSVPTLTLADPVLFVDRFASML
QLGDK
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mRNA from alignment at P-wetherbeei_contig1458:989..2619-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1458.1.2 ID=mRNA_P-wetherbeei_contig1458.1.2|Name=mRNA_P-wetherbeei_contig1458.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1631bp|location=Sequence derived from alignment at P-wetherbeei_contig1458:989..2619- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGGCCCCGCTTAAGGGGGCTTGGTGTGGTGGGTGTGAGCTCTACGA CGGATGGCCGGACGAGACTGCGGGCAACGTCGTCTGCAACAGCTGCGGCC GGGTCCTCGAGCAAGACGCCATTGTCAGCACGGTGGAGTTCAGCGAGACA AATGGGCAGAGCGCAGTCGTCGGGCAGTTCGTGAGTAGCACCTGCACGAG GCCGTACGGCACGGGCCGCGGAGGCCACAGCCGATACGGCTACGCCATGA GCCGCGCTCCGCGCGAGCAGACGCTCAAAACCGGATCCCAACTCATCAAC TCCGTAAGCGTCCTTAAGCAGTCCGTTCCCACTGGCATTGCTGTGTCTTC AGTTTCCTTTTTAGGCGTACGTCGTTTTCCTGACCCAATCCTGGCCAAAT TTTTTGATGGAGGTCCCAACGGCGCCACATCCGGGCAGTACACTCGGTTG TCCTTCTCCGTGATGTTCCGCTCACAAACCTCTATTTTTCAGGCCGCGAT GAGGCTCCAGCTCAAGGCGCCAACCACGGAGCGCGCCATTCGGTGCTTCA AGCTCGCGGTCGAGCACAAGTTCTGCCAGGGGCGCAAGTCGCAGCTCGTG GCGGCGGCGTGCGCCTATATTGCGTGCCGCGAGGCGGTAAGATGAGACCC TTTTTTCCCATATTTGTTTGCCGGCGCTTTGCTTTGCCCGATCCAACCTG CCAGGCTACAGCCGAAATCTCTCAGCACACTTTTAGCAGAACAGCCGCCG GCGCTTCAAGTCTGAGCTTGTGTTTTCCTGCTTTTGCAGTTGTCCCCACG CCGCCAACACCGAAACCTGCATCCTTCGCGACGACCGCCTGCCGTCTGGC CTATTTTTGTCGCGCCCCCTTCTCAGCGCCTGTCGCCAACACCTTTCACC GTCCGGCCATCCGCCCCCGCCCCGTGCCACCCGTTCCCCCCTTTCTCCAA CCGTCTTACATCTTTCTCCTCCCAATTTGTCCACACATTTCCGCTCTGCT CTGCTCTGCATGCCAATCGGCAGAACCTTCCAGTGATGCTGCTCGATATC AGTGACGTGGTGGGCGAGAACGTCTTCCACCTTGGCGACTGCTACCGGAA ACTCGTCGCCGCCCTCTACCATAACGAGGACCGCGGCAAGAACGCGTTGG TTGCCGGGGACCCCTCGGTGAGCGTCCAGTCCGTTCAGATCCGGCTCGGT TCGCATTTTCCGTTCCCGTTGGTCTTGTTTTTCATCTTTGCTCTCGCTCC ATGCTATTTGCTCCGTCGCGTTTCCGCGCGGGCGCCAGTTTCGCGGCCAC CGCCGGGTTGGAGCGTTTACGTATCAGCTAGTGATACCCTTTCTTTCGTC GACCGCTTCCTTCACTTACTTTTGCTGTTTTTGACCTCAATCGCTGAGTA TTCTTACCTGTTTCTTCCGACCGGGTCCTCCCACCGGCTTTCGCGCTGTC CTTCGCAGCGTCGTCTCTCCTCACTTTTTCCACTAAACTTTGGCTGGAAC GACTATGTTCTGCCCCGCGGAAAACACACCCAAAAACCGAGCAGGTGGAC CCGTCAGTGCCGACGCTGACGCTGGCCGACCCGGTGCTGTTCGTGGACCG CTTCGCCAGCATGCTCCAGCTGGGCGACAAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1458:989..2619-

>mRNA_P-wetherbeei_contig1458.1.2 ID=mRNA_P-wetherbeei_contig1458.1.2|Name=mRNA_P-wetherbeei_contig1458.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=615bp|location=Sequence derived from alignment at P-wetherbeei_contig1458:989..2619- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGGCCCCGCTTAAGGGGGCTTGGTGTGGTGGGTGTGAGCTCTACGA
CGGATGGCCGGACGAGACTGCGGGCAACGTCGTCTGCAACAGCTGCGGCC
GGGTCCTCGAGCAAGACGCCATTGTCAGCACGGTGGAGTTCAGCGAGACA
AATGGGCAGAGCGCAGTCGTCGGGCAGTTCGTGAGTAGCACCTGCACGAG
GCCGTACGGCACGGGCCGCGGAGGCCACAGCCGATACGGCTACGCCATGA
GCCGCGCTCCGCGCGAGCAGACGCTCAAAACCGGATCCCAACTCATCAAC
TCCGCCGCGATGAGGCTCCAGCTCAAGGCGCCAACCACGGAGCGCGCCAT
TCGGTGCTTCAAGCTCGCGGTCGAGCACAAGTTCTGCCAGGGGCGCAAGT
CGCAGCTCGTGGCGGCGGCGTGCGCCTATATTGCGTGCCGCGAGGCGAAC
CTTCCAGTGATGCTGCTCGATATCAGTGACGTGGTGGGCGAGAACGTCTT
CCACCTTGGCGACTGCTACCGGAAACTCGTGGACCCGTCAGTGCCGACGC
TGACGCTGGCCGACCCGGTGCTGTTCGTGGACCGCTTCGCCAGCATGCTC
CAGCTGGGCGACAAG
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