mRNA_P-wetherbeei_contig14568.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14568.1.1
Unique NamemRNA_P-wetherbeei_contig14568.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14568.1.1 vs. uniprot
Match: UPI00198839B1 (UvrD-helicase domain-containing protein n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=UPI00198839B1)

HSP 1 Score: 615 bits (1585), Expect = 1.440e-209
Identity = 339/572 (59.27%), Postives = 405/572 (70.80%), Query Frame = 1
Query:    1 PPEASTATPWEALRAMLELLPRAVAELTVVFGERGQADFTEIAQGAVRALGDPEAPTDLLLALDVRIKHILVDEFQDTSISQWELLKCLTAGWQAGDDGRTVFAVGDPMQSIYRFREAEVRLFLQAWHAGLTSVPLVPLRLATNFRSEAGIVDWVNATFPEVLPAEEDETSGAVPYAPSVAHHAAIEGDAVQWHLFDERADEAQRVVEIARAARATDAAGSIAILVRNRSHLDCIVPALQQAGVRYRAVEIERLGEKQVVQDLYALTRALAHPADRAAWLAVLRAPWCGLSPAQLAALVEGVRD-TVWEAMNDAERIALLDDDARSRLERVRGVLDAARAHRLRGNLRDRVEGVWLALGGPACCSDATELEDAEIFLDVLADEDDAGDLAAHSTLAESLAELYALPDMNAGDDAIEIMTVHKAKGLEFDTVIMPGLDRRQRHGDPPLIIWKSLAEKALLLAPIREAGAAKDAAYEYVRSLERDAEDIEAGRLFYVAATRAASRLHLTGCIRRDDHGEAKPPVKRTLLSKVWAIASAHV----GPAQAPRAAAAATAVPPQTFKRFAPGFVLP 1701
            PP       W AL A+L LL  AV +L   F  R + DFT+I+ GA+ ALG  + P+DLLL+LD RI HILVDEFQDTS+SQW LL+ LT+GW+ GD GRT+F VGDPMQSIYRFREAEV LFL+AW+ G+  V L PL L+TNFRS+A IVDWVN+ FP VLP + D  SGAVPY+PS  HH  +   AV WH   +   E+++ V+I R A+  +A GS+AILVRNRSHLD IVPAL++AG+RYRAVEIE+LGEKQVVQDLYALTRAL HPADR AW+A+LRAPW GLS ++L++L E  ++ TVWE +  A             LER R VL  A A RLRG LR RVEGVWLALGGPAC  DAT+LEDAEIF D L   ++AG L     LA+ +A L+ALPD+NAG DA+EIMT+HKAKGLEFDTVI+PGLDR  R GD PL  WK+L+ + LLLAPI E G  K+  YEYVR L + AEDIEAGRLFYVAATRA  RLHL GC R D+ G  KPP KR+LL K W  A+       G AQA   A   T +  QT +R    +V+P
Sbjct:  248 PPAMYEDAQWGALEAILALLLPAVKQLVAAFSLRNEVDFTQISHGALTALGSADDPSDLLLSLDARISHILVDEFQDTSVSQWALLEKLTSGWEQGD-GRTLFCVGDPMQSIYRFREAEVGLFLRAWNEGIGGVSLEPLTLSTNFRSQAAIVDWVNSFFPNVLPPDADAVSGAVPYSPSTLHHPPLPEPAVHWHCSFDLQAESRKTVQIIRDAQ--EAKGSVAILVRNRSHLDRIVPALKEAGIRYRAVEIEQLGEKQVVQDLYALTRALLHPADRVAWVALLRAPWAGLSLSELSSLFENKKNQTVWELIQSAPA-----------LERFRKVLAPALADRLRGTLRSRVEGVWLALGGPACVEDATDLEDAEIFFDELEKLEEAGGLPDLQLLADKIARLWALPDVNAGPDAVEIMTIHKAKGLEFDTVIVPGLDRAPRSGDRPLFAWKNLSSR-LLLAPITETGGPKEPLYEYVRELNKAAEDIEAGRLFYVAATRARHRLHLLGCARADEAGAPKPPNKRSLLHKAWFEAAGRFPSFDGNAQAEEKA---TEISTQTLRRLPSTYVVP 801          
BLAST of mRNA_P-wetherbeei_contig14568.1.1 vs. uniprot
Match: A0A536XY24_9PROT (DNA helicase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536XY24_9PROT)

HSP 1 Score: 593 bits (1529), Expect = 1.650e-199
Identity = 325/569 (57.12%), Postives = 399/569 (70.12%), Query Frame = 1
Query:   28 WEALRAMLELLPRAVAELTVVFGERGQADFTEIAQGAVRALGDPEAPTDLLLALDVRIKHILVDEFQDTSISQWELLKCLTAGWQAGDDGRTVFAVGDPMQSIYRFREAEVRLFLQAWHAGLTSVPLVPLRLATNFRSEAGIVDWVNATFPEVLPAEEDETSGAVPYAPSVAHHAAIEGDAVQWHLFDERADEAQRVVEIARAARATDAAGSIAILVRNRSHLDCIVPALQQAGVRYRAVEIERLGEKQVVQDLYALTRALAHPADRAAWLAVLRAPWCGLSPAQLAALVEGVRDT-----------VWEAMNDAERIALLDDDARSRLERVRGVLDAARAHRLRGNLRDRVEGVWLALGGPACCSDATELEDAEIFLDVLADEDDAGDLAAHSTLAESLAELYALPDMNAGDDAIEIMTVHKAKGLEFDTVIMPGLDRRQRHGDPPLIIWKSLAEKALLLAPIREAGAAKDAAYEYVRSLERDAEDIEAGRLFYVAATRAASRLHLTGCIRRDDHGEAKPPVKRTLLSKVWAIASAHVGPAQAPRAAAAATAVPPQTFKRFAPGFVLP 1701
            WEAL A+L LL  AVA L V+FGERGQADFTE A GA+ ALG  + P+DLLL+LD +I H+LVDEFQDTS+SQ+ELL  LT+GWQ GD GRT+F VGDPMQSIYRFREAEV LFLQA H+GL SV L P+ L+TN RS+ G+V W N +FP VLPA+ED+TSGAVPY P+  H  A+ G AV WH   +R +EA+RVV I R     +A+GS AILVRNR+HLD IVPAL++AGVR+RA++IE+LGEKQVVQDLYALTRAL H  DR AWLA LRAPWCGL+ A L  L  G  +            +++ M D   ++    D + R++R R VL     +RLRG+LR+RVEG WLALGGPAC    T+LEDAEIFLD L   ++AG++   +   +    LYA PD+ A  DA+EIMT+H+AKGLEFDTVI+PGLDR  R G  PL++WKSL    LLLAPI E GA++D  Y+YVR L+++A+DIEAGRLFYVAATRA  RLHL  C + D+    K P +R+LL+K+W  A  H G A A   A            R   GF LP
Sbjct:  244 WEALEAILALLKPAVAHLKVLFGERGQADFTEFAHGALEALGSVDDPSDLLLSLDQKISHVLVDEFQDTSLSQFELLTKLTSGWQEGD-GRTLFLVGDPMQSIYRFREAEVSLFLQAKHSGLGSVKLEPIELSTNRRSQEGLVKWFNESFPRVLPAQEDQTSGAVPYLPASPHEPALPGAAVTWHCGYDREEEAKRVVAIVR-----EASGSKAILVRNRAHLDEIVPALKEAGVRFRALDIEQLGEKQVVQDLYALTRALLHLGDRIAWLACLRAPWCGLTLADLLLLSSGRSEEGGSEYTSGGALIFDKMRDVTHLSA---DGQKRVDRARSVLAPLVKNRLRGSLRERVEGAWLALGGPACVESETDLEDAEIFLDELERLEEAGEVDLAALEDKIDRRLYAQPDVKATKDAVEIMTIHRAKGLEFDTVIVPGLDRLPRSGPKPLLVWKSLLPAGLLLAPIDETGASEDPTYQYVRELDKEADDIEAGRLFYVAATRAKQRLHLLACAKADEDLRPKEPSRRSLLAKIWWQAREHFGDAPADAIAEPERMPIHDVLHRLPAGFALP 803          
BLAST of mRNA_P-wetherbeei_contig14568.1.1 vs. uniprot
Match: A0A1F4F266_9PROT (DNA helicase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 TaxID=1797505 RepID=A0A1F4F266_9PROT)

HSP 1 Score: 583 bits (1504), Expect = 8.320e-196
Identity = 314/538 (58.36%), Postives = 384/538 (71.38%), Query Frame = 1
Query:    1 PPEASTATPWEALRAMLELLPRAVAELTVVFGERGQADFTEIAQGAVRALGDPEAPTDLLLALDVRIKHILVDEFQDTSISQWELLKCLTAGWQAGDDGRTVFAVGDPMQSIYRFREAEVRLFLQAWHAGLTSVPLVPLRLATNFRSEAGIVDWVNATFPEVLPAEEDETSGAVPYAPSVA--HHAAIEGDAVQWHLFDERADEAQRVVEIARAARATDAAGSIAILVRNRSHLDCIVPALQQAGVRYRAVEIERLGEKQVVQDLYALTRALAHPADRAAWLAVLRAPWCGLSPAQLAALVEGVRD-TVWEAMNDAERIALLDDDARSRLERVRGVLDAARAHRLRGNLRDRVEGVWLALGGPACCSDATELEDAEIFLDVLADEDDAGDLAAHSTLAESLAELYALPDMNAGDDAIEIMTVHKAKGLEFDTVIMPGLDRRQRHGDPPLIIWKSLAEKALLLAPIREAGAAKDAAYEYVRSLERDAEDIEAGRLFYVAATRAASRLHLTGCIRRDDHGEAKPPVKRTLLSKVWAIASA 1605
            PPE  T   WE L A++ELLP A A+L VVF ER + DFTEIAQGAVRALG P+APTDLLL+LD RI+H+LVDEFQDTS+SQWELL+ LTAGW+ GD GRT+F VGDPMQSIYRFREAEV LFL AW  GL +V L  L L+TNFRS+  +V+W NA FP++LP + D  SGAVPY P V     A + G+AV WH   +RA EA RVVE+A++A      G  AILVR+R  L  IVPAL+ AG+RYRA+EIERLGE+QVVQDLYALTRAL H  DR AWLA+LRAPW GLS  +L  +  G R  T+WE         L+ DD    LE    VL  A A R RG+LR RVEGVWLALGGPAC +D T+LEDA I+LD L   + +G +   + LAE+L  LYALPD+ AGD++++IMT+HKAKGLEF TVI+PGLD+     D PL +WK +    +LLAPI+  GA +D  Y Y+  L+ + ED+EA RL YVAATRA +RLHL  C++RD+ GE K P  R+LL++ W +A A
Sbjct:  249 PPERYTDEQWEILAAIVELLPLAAAQLKVVFAERNETDFTEIAQGAVRALGTPDAPTDLLLSLDHRIRHVLVDEFQDTSVSQWELLERLTAGWERGD-GRTLFLVGDPMQSIYRFREAEVALFLDAWQGGLGTVELERLTLSTNFRSQPALVEWFNAAFPKILPEKPDRGSGAVPYTPKVPDPEKARLPGEAVAWHPVADRATEAARVVELAKSAE-----GRAAILVRSRESLAAIVPALKAAGIRYRAIEIERLGERQVVQDLYALTRALIHLGDRVAWLALLRAPWLGLSLEKLLEIAGGERSRTIWE---------LIRDDLF--LESFTRVLAPAIAERERGSLRSRVEGVWLALGGPACVADRTDLEDAGIYLDELEKLEASGAIGDPAALAEALERLYALPDVEAGDESLQIMTIHKAKGLEFGTVIVPGLDKGPGRDDQPLFLWKEMVGSGMLLAPIKATGAERDPIYSYLSRLDTEVEDMEASRLLYVAATRAENRLHLLECVKRDEEGEVKRPPARSLLARAWPVAEA 769          
BLAST of mRNA_P-wetherbeei_contig14568.1.1 vs. uniprot
Match: A0A177R3W8_9PROT (DNA helicase n=1 Tax=Betaproteobacteria bacterium SCGC AG-212-J23 TaxID=1799662 RepID=A0A177R3W8_9PROT)

HSP 1 Score: 583 bits (1503), Expect = 2.460e-195
Identity = 327/603 (54.23%), Postives = 407/603 (67.50%), Query Frame = 1
Query:    1 PPEASTATPWEALRAMLELLPRAVAELTVVFGERGQADFTEIAQGAVRALGDPEAPTDLLLALDVRIKHILVDEFQDTSISQWELLKCLTAGWQAGDDGRTVFAVGDPMQSIYRFREAEVRLFLQAWHAGLTSVPLVPLRLATNFRSEAGIVDWVNATFPEVLPAEEDETSGAVPYAPSVAHHAAIEGDAVQWHLFDERADEAQRVVEIARAARATDAAGSIAILVRNRSHLDCIVPALQQAGVRYRAVEIERLGEKQVVQDLYALTRALAHPADRAAWLAVLRAPWCGLSPAQLAALVEGVRDT-----------VWEAMNDAERIALLDDDARSRLERVRGVLDAARAHRLRGNLRDRVEGVWLALGGPACCSDATELEDAEIFLDVLADEDDAGDLAAHSTLAESLAELYALPDMNAGDDAIEIMTVHKAKGLEFDTVIMPGLDRRQRHGDPPLIIWKSLAEK-------------------------ALLLAPIREAGAAKDAAYEYVRSLERDAEDIEAGRLFYVAATRAASRLHLTGCIRRDDHGEAKPPVKRTLLSKVWAIASAHVGPAQAPRAAAAATAVPPQTFKRFAPGFVLP 1701
            PPE      WEAL A+L LL  AVA+L V+FGERGQADFTE A GA+ ALG  + P+DLLL+LD +I HILVDEFQDTS+SQ+ELL  LT+GW A DDGRT+F VGDPMQSIYRFREAEV LFL+A H+G+ SV L P+ L+TN RS+ G+V+W NA FP VLP++ED+TSGAVPY P+      ++G AV WH   +R  EA +VV I +++      G  AILVRNR+HLD IVPAL++AGVR++A++IE+LGEKQVVQDLYALTRAL H  DR AWLA+LRAPWCGL+ A L AL  G  D            V++ +ND+  ++    D  +R+ R+R VL     +RLRG+LR+RVEG WLALGGPAC   AT+LEDAEIFLD L   ++AG++   +        LYALPD+ A DDA+EIMT+H+AKGLEFD VI+PGLDR  R G  PL++WKSL                            +LLLAPI E GA +D  Y+YVR L++DA+DIE+GRLFYVAATRA  RLHL  C +  +   A+ P KR+LLSK+W  A AH GPA A   A           +R   GF +P
Sbjct:  235 PPEKYEDRQWEALEAILALLKPAVAQLKVLFGERGQADFTEFAHGALAALGSVDDPSDLLLSLDQKISHILVDEFQDTSLSQYELLVKLTSGWSA-DDGRTLFLVGDPMQSIYRFREAEVSLFLRAKHSGVGSVSLEPIELSTNRRSQEGLVEWFNAAFPRVLPSQEDQTSGAVPYLPATPFEPKLDGTAVSWHCGYDREAEAAQVVSIVKSSP-----GKKAILVRNRAHLDEIVPALKEAGVRFKALDIEQLGEKQVVQDLYALTRALLHLGDRIAWLALLRAPWCGLTLADLLALSVGPPDKGGSEFTSGGFLVFDLLNDSVHLS---PDGYARVSRLRDVLKPLIDNRLRGSLRERVEGAWLALGGPACVESATDLEDAEIFLDELERLEEAGEVDLAALEDRIKGRLYALPDVEAPDDAVEIMTIHRAKGLEFDHVIVPGLDRLPRSGPKPLLVWKSLVSSVLRPDSGVRSPRPPDKGAANEVSGGSLLLAPIDETGAGEDPTYKYVRELDKDADDIESGRLFYVAATRAKQRLHLLACAKATEDLAARDPSKRSLLSKIWWQARAHFGPAPADAIAEPERMPIRDVLQRLPAGFAVP 828          
BLAST of mRNA_P-wetherbeei_contig14568.1.1 vs. uniprot
Match: A0A536Z4C8_9PROT (DNA helicase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536Z4C8_9PROT)

HSP 1 Score: 580 bits (1494), Expect = 2.870e-194
Identity = 313/544 (57.54%), Postives = 388/544 (71.32%), Query Frame = 1
Query:   28 WEALRAMLELLPRAVAELTVVFGERGQADFTEIAQGAVRALGDPEAPTDLLLALDVRIKHILVDEFQDTSISQWELLKCLTAGWQAGDDGRTVFAVGDPMQSIYRFREAEVRLFLQAWHAGLTSVPLVPLRLATNFRSEAGIVDWVNATFPEVLPAEEDETSGAVPYAPSVAHHAAIEGDAVQWHLFDERADEAQRVVEIARAARATDAAGSIAILVRNRSHLDCIVPALQQAGVRYRAVEIERLGEKQVVQDLYALTRALAHPADRAAWLAVLRAPWCGLSPAQLAALVEGVRDT-----------VWEAMNDAERIALLDDDARSRLERVRGVLDAARAHRLRGNLRDRVEGVWLALGGPACCSDATELEDAEIFLDVLADEDDAGDLAAHSTLAESLAELYALPDMNAGDDAIEIMTVHKAKGLEFDTVIMPGLDRRQRHGDPPLIIWKSLAEKALLLAPIREAGAAKDAAYEYVRSLERDAEDIEAGRLFYVAATRAASRLHLTGCIRRDDHGEAKPPVKRTLLSKVWAIASAHVGPAQA 1626
            WEAL A+L LL  AVA L V+FGERGQADFTE A GA+ ALG  + P+DLLL+LD +I H+LVDEFQDTS SQ+ LL+ L +GW + DDGRT+F VGDPMQSIYRFREAEV LFL+A H G+ SV L P+ L+TN RS+ G+V+W NA FP VLPA+ED+T+GAVPY P+      + G AV WH   +R +EA++VV I R     +A+GS AILVRNR+HLD IVPAL++AGVR+RA++IE+LGEKQVVQDLYALTRAL H  DR AWLA LRAPWCGL+ A L  L  G  +            +++ M D   ++    D + R++R R VL     +RLRG+LR+RVEG WLALGGPAC    T+LEDAEIFLD L   ++AG++   +   +    LYA PD+ A  DA+EIMT+H+AKGLEFDTVI+PGLDR  R G  PL++WKSL    LLLAPI E GA +D  Y+YVR L+++A+DIEAGRLFYVAATRA  RLHL  C + D+    K P KR+LL+KVW  A  H G A A
Sbjct:  244 WEALEAILALLKPAVAHLKVLFGERGQADFTEFAHGALEALGSVDDPSDLLLSLDQKISHVLVDEFQDTSQSQFSLLEKLVSGWTS-DDGRTLFLVGDPMQSIYRFREAEVSLFLRAKHHGIGSVSLEPIELSTNRRSQEGLVEWFNAAFPRVLPAQEDQTAGAVPYLPATPFEPKLAGTAVTWHCGYDREEEAKKVVSIVR-----EASGSKAILVRNRAHLDEIVPALKEAGVRFRALDIEQLGEKQVVQDLYALTRALLHLGDRIAWLACLRAPWCGLTLADLLLLSSGRSEEGGSEYTGGGALIFDKMRDVTHLSA---DGQKRVDRARSVLAPLVKNRLRGSLRERVEGAWLALGGPACVESETDLEDAEIFLDELERLEEAGEVDLAALEDKIDRRLYAQPDVQAPKDAVEIMTIHRAKGLEFDTVIVPGLDRLPRSGPKPLLVWKSLLPAGLLLAPIDETGAGEDPTYQYVRELDKEADDIEAGRLFYVAATRAKQRLHLLACAKADEDLRPKEPSKRSLLAKVWWQAREHFGEAPA 778          
BLAST of mRNA_P-wetherbeei_contig14568.1.1 vs. uniprot
Match: A0A1F4FBE6_9PROT (DNA helicase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14 TaxID=1797501 RepID=A0A1F4FBE6_9PROT)

HSP 1 Score: 566 bits (1459), Expect = 4.780e-189
Identity = 322/584 (55.14%), Postives = 397/584 (67.98%), Query Frame = 1
Query:    1 PPEASTATPWEALRAMLELLPRAVAELTVVFGERGQADFTEIAQGAVRALGDPEAPTDLLLALDVRIKHILVDEFQDTSISQWELLKCLTAGWQAGDDGRTVFAVGDPMQSIYRFREAEVRLFLQAWHAGLTSVPLVPLRLATNFRSEAGIVDWVNATFPEVLPAEEDETSGAVPYAPSVAH--HAAIEGDAVQWHLFDERADEAQRVVEIARAARATDAAGSIAILVRNRSHLDCIVPALQQAGVRYRAVEIERLGEKQVVQDLYALTRALAHPADRAAWLAVLRAPWCGLSPAQLAALVEGVR-DTVWEAMNDAERIALLDDDARSRLERVRGVLDAARAHRLRGNLRDRVEGVWLALGGPACCSDATELEDAEIFLDVLADEDDAGDLAAHSTLAESLAELYALPDMNAGDDAIEIMTVHKAKGLEFDTVIMPGLDRRQRHGDPPLIIWKSLAEKA----------------LLLAPIREAGAAKDAAYEYVRSLERDAEDIEAGRLFYVAATRAASRLHLTGCIRRDDHGEAKPPVKRTLLSKVWAIASAHVGPAQAPRAAAAATAVPP-QTFKRFAPGF 1692
            PPE  +   WE L A++ELLP A A+L VVF ERG++DFTEIAQGAVRALG  +APTDLLLALD RI+HILVDEFQDTS+SQ+EL++ LT+GWQ  DDGRT+F VGDPMQSIYR+R+AEV LFL+A   G+ +V L  L L TNFRS+AG+VDW NA FP +LP E D  SGAVPY+P+  +  + A+ G AV WH   +R  EAQ VV++ R+A      G  AILVR+R  L  IVPAL+ AG+RYRA+EIE LGEKQVVQDLYALTRAL H  DR AWL++LRAPWCG S  QL  +    R  T+WE         L+ DD    LER   +L  A A+R RG+LR+RVEGVWLALGGPAC    T LEDAEI+LD L   + +G +A  + L E+L  LYALPD++AGDD ++IMT+HKAKGLEF TVI+PGLD+     DPPL +WK L   A                LLLAPI++ GA +D  Y Y+RSL+ ++ED+E+ RL YVAATRA  RLHL GC++ ++ G  K P  R+LL++ W +A         P  A  A A  P  T  R AP F
Sbjct:  236 PPERYSDDQWEILAAIVELLPLAAAQLKVVFAERGESDFTEIAQGAVRALGSADAPTDLLLALDTRIQHILVDEFQDTSLSQYELVEKLTSGWQP-DDGRTLFLVGDPMQSIYRWRQAEVALFLKAQDEGIGAVQLERLTLKTNFRSQAGLVDWFNAAFPRILPREADRASGAVPYSPAFPNPENPALGGAAVTWHSLPDREAEAQTVVDLVRSAE-----GRAAILVRSRESLADIVPALKAAGIRYRAIEIEHLGEKQVVQDLYALTRALLHLGDRIAWLSLLRAPWCGFSLNQLHQIAGSDRYATIWE---------LIKDDLF--LERFTRILAPAIANRDRGSLRERVEGVWLALGGPACVESPTALEDAEIYLDELDKLEASGAIADPAALREALERLYALPDVDAGDDDLQIMTIHKAKGLEFGTVIVPGLDKAPATTDPPLFLWKELVSSAPHPPVKGGSELQRAGGLLLAPIKQTGADRDPIYSYLRSLDAESEDMESSRLLYVAATRAEHRLHLLGCVKCEEDGTPKRPPARSLLARAWPVAEEFFRMPIPPAPAREAPAPEPITTLTRLAPDF 802          
BLAST of mRNA_P-wetherbeei_contig14568.1.1 vs. uniprot
Match: A0A521YT78_9PROT (DNA helicase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521YT78_9PROT)

HSP 1 Score: 557 bits (1435), Expect = 6.490e-185
Identity = 315/584 (53.94%), Postives = 394/584 (67.47%), Query Frame = 1
Query:    1 PPEASTATPWEALRAMLELLPRAVAELTVVFGERGQADFTEIAQGAVRALGDPEAPTDLLLALDVRIKHILVDEFQDTSISQWELLKCLTAGWQAGDDGRTVFAVGDPMQSIYRFREAEVRLFLQAWHAGLTSVPLVPLRLATNFRSEAGIVDWVNATFPEVLPAEEDETSGAVPYAPSVAH--HAAIEGDAVQWHLFDERADEAQRVVEIARAARATDAAGSIAILVRNRSHLDCIVPALQQAGVRYRAVEIERLGEKQVVQDLYALTRALAHPADRAAWLAVLRAPWCGLSPAQLAALVEGVR-DTVWEAMNDAERIALLDDDARSRLERVRGVLDAARAHRLRGNLRDRVEGVWLALGGPACCSDATELEDAEIFLDVLADEDDAGDLAAHSTLAESLAELYALPDMNAGDDAIEIMTVHKAKGLEFDTVIMPGLDRRQRHGDPPLIIWKS-------------LAEKALLLAPIREAGAAKDAAYEYVRSLERDAEDIEAGRLFYVAATRAASRLHLTGCIRRDDHGEAKPPVKRTLLSKVWAIASAHVGPAQAPRAAAAATAVPP-QTFKRFAPGFVLP 1701
            PPE  +   WE L A++ELLP A A+L VVF ERG+ DFTEIAQGAVRALG  +APTDLLLALD RI+HILVDEFQDTS+SQ+EL++ LT+GW+ GD GRT+F VGDPMQSIYR+R+AEV LFL+A H G+ +V L  L L TNFRS+AG+VDW NA FP +LP E D  SGAVPY+ + +H  +  +E   V WH   +R  EA+ VV++ +     +A G  AILVR+R  L  IVPAL+ AG+RYRA+EIE LGEKQVVQDLYALTRAL H  DR AWL++LRAPWCG S  QL  +    R  T+WE         L+ DD    LER   +L  A A R RG+LR+RVEGVWLALGGPAC    T+LEDAEI+LD L   + +G +A  + L E+L  LYALPD++A DD ++IMT+HKAKGLEF TVI+PGLD+     DPPL +W+              L     LLAPI++ G  +D  Y Y+R L+ D+ED+E+ RL YVAATRA  RLHL GC++ D+ G+ K P  R+LL++ W +A   +     P  A  A A  P  T  R AP F +P
Sbjct:  283 PPERYSDEQWEVLAAIVELLPLAAAQLKVVFAERGETDFTEIAQGAVRALGSADAPTDLLLALDTRIQHILVDEFQDTSLSQYELVERLTSGWEPGD-GRTLFLVGDPMQSIYRWRQAEVALFLKAQHEGIGAVQLERLTLKTNFRSQAGLVDWFNAAFPRILPREPDRASGAVPYSSASSHPKNKPLENP-VTWHSLPDREAEARAVVDLVK-----NAEGRAAILVRSRESLADIVPALKAAGIRYRAIEIEHLGEKQVVQDLYALTRALLHLGDRIAWLSLLRAPWCGFSLHQLHQIAGSDRYATIWE---------LIKDDLF--LERFTRILAPAIADRDRGSLRERVEGVWLALGGPACVESQTDLEDAEIYLDELDKLEASGAIADPAALREALERLYALPDVDASDDDLQIMTIHKAKGLEFGTVIVPGLDKAPAITDPPLFLWRETIGPPVKGGSERLLRAGGFLLAPIKQTGTDRDPIYSYLRLLDSDSEDMESSRLLYVAATRAEHRLHLLGCVKCDEEGDPKRPTSRSLLARAWPVAEEFLRTLTPPAPAREAPAPAPITTLTRLAPDFHMP 848          
BLAST of mRNA_P-wetherbeei_contig14568.1.1 vs. uniprot
Match: A0A1F4BKN8_9PROT (DNA helicase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26 TaxID=1797492 RepID=A0A1F4BKN8_9PROT)

HSP 1 Score: 556 bits (1433), Expect = 8.100e-184
Identity = 306/545 (56.15%), Postives = 374/545 (68.62%), Query Frame = 1
Query:    1 PPEASTATPWEALRAMLELLPRAVAELTVVFGERGQADFTEIAQGAVRALGDPEAPTDLLLALDVRIKHILVDEFQDTSISQWELLKCLTAGWQAGDDGRTVFAVGDPMQSIYRFREAEVRLFLQAWHAGLTSVPLVPLRLATNFRSEAGIVDWVNATFPEVLPAEEDETSGAVPYAPSVAHHAAIEGDAVQWHLF--DERADEAQRVVEIARAARATDAAGSIAILVRNRSHLDCIVPALQQAGVRYRAVEIERLGEKQVVQDLYALTRALAHPADRAAWLAVLRAPWCGLSPAQLAALVEG-VRDTVWEAMNDAERIALLDDDARSRLERVRGVLDAARAHRLRGNLRDRVEGVWLALGGPACCSDATELEDAEIFLDVLADEDDAGDLAAHSTLAESLAELYALPDMNAGDDAIEIMTVHKAKGLEFDTVIMPGLDRRQRHGDPPLIIWKSLAEKA------LLLAPIREAGAAKDAAYEYVRSLERDAEDIEAGRLFYVAATRAASRLHLTG--CIRRDDHGEAKP--PVKRTLLSKVWAI 1596
            PPE  +   WE L A++ LLPR+  +L + F  RGQ DFTE+AQGA+ ALG  +AP+DL LALD RI+H+LVDEFQDTSISQ+EL+  LTAGW+ GD GRTVFAVGDPMQSIYRFREAEV LFL+A   G+  + L P+ L+ NFRS+AGIV+WVNATF  V+P  ED  +G+VPY PSVA  AA+ G AV  H F  D+RA EA RVV++   AR  D  G +AILVRNR HL  IVP L+ AG+R+RA+EIE LG + VVQDL ALTRAL+H ADR AWLA LRAPWCGL  A L AL  G  +  VWE + D  R+AL+  D R RL+RVR VL      R RG+LR R  G W AL GPAC  DAT+LEDAEI+ D L   ++AG++A  +   + LA+LYALPD+ A D+ ++IMT+HKAKGLEFDTVI+PGL R  R  D  L +W     K+      LLLAPI E GA  D  Y +++ LE     +EAGRL YVAATRA  RLHL G   ++ D  G   P  P  RTLL ++W +
Sbjct:  324 PPERYSDEQWEVLGAIMRLLPRSTGQLKLAFQARGQVDFTEVAQGALLALGGADAPSDLALALDYRIRHLLVDEFQDTSISQYELIARLTAGWEPGD-GRTVFAVGDPMQSIYRFREAEVGLFLRARATGMAGIELGPIGLSANFRSQAGIVEWVNATFARVMPEREDVATGSVPYTPSVATRAALPGAAVSVHPFFNDDRAGEAARVVDLVAQARREDPGGKVAILVRNRGHLREIVPRLKDAGLRFRAIEIEPLGHRPVVQDLLALTRALSHLADRLAWLATLRAPWCGLKLADLQALAGGDAKRAVWELLGDDARLALVSGDGRERLQRVRAVLQPCLDDRCRGSLRGRTAGAWFALSGPACVEDATDLEDAEIYFDYLESHEEAGEIADPAAFEKGLADLYALPDLQA-DEQLQIMTIHKAKGLEFDTVIVPGLGRAPRGDDARLFLWMEQPRKSGDGAADLLLAPIHETGAEDDPIYRWLQKLEAGKGRLEAGRLLYVAATRARQRLHLLGDASLKADGDGAPVPKAPGARTLLGELWTL 866          
BLAST of mRNA_P-wetherbeei_contig14568.1.1 vs. uniprot
Match: A0A6M4H7L8_9PROT (DNA helicase n=1 Tax=Usitatibacter palustris TaxID=2732487 RepID=A0A6M4H7L8_9PROT)

HSP 1 Score: 553 bits (1426), Expect = 1.290e-182
Identity = 307/549 (55.92%), Postives = 379/549 (69.03%), Query Frame = 1
Query:    1 PPEASTATPWEALRAMLELLPRAVAELTVVFGERGQADFTEIAQGAVRALGDPEAPTDLLLALDVRIKHILVDEFQDTSISQWELLKCLTAGWQAGDDGRTVFAVGDPMQSIYRFREAEVRLFLQAWHAGLTSVPLVPLRLATNFRSEAGIVDWVNATFPEVLPAEEDETSGAVPYAPSVAHHAAIEGDAVQWHLF--------DERADEAQRVVEIARAARATDAAGSIAILVRNRSHLDCIVPALQQAGVRYRAVEIERLGEKQVVQDLYALTRALAHPADRAAWLAVLRAPWCGLSPAQLAALV------EGVRDTVWEAMNDAERIALLDDDARSRLERVRGVLDAARAHRLRGNLRDRVEGVWLALGGPACCSDATELEDAEIFLDVLADEDDAGDLAAHSTLAESLAELYALPDMNAGDDA-IEIMTVHKAKGLEFDTVIMPGLDRRQRHGDPPLIIWKSLAEKALLLAPIREAGAAKDAAYEYVRSLERDAEDIEAGRLFYVAATRAASRLHLTGCIR-RDDHGEAKPPVKRTLLSKVWAIA 1599
            PP A +   W AL +++E+LPRA AEL VVF ERG+ DFT IAQ AV+ALG  + PT+LLLALDV+++H+LVDEFQDTS  QWELL  LT+GWQ  DDGRTVF VGDPMQSIYRFREA+V LFL+A   GL  V L  LRLATNFRS+AG+V+WVN +F  +LP EED   GAVPY+ S A H    G AVQWH F         ER  EA RVVE+ +AA   DA+ +IAILVRNRS+LD IVPA+++A +R+RAVEIE+L  +QV+QDL A+TRAL+HPADR AWL VLRAPWC L+ A L AL       EG R+T+WE M D  ++  +  D R+R+ RVR  L      RLRG LR+RVE  WLALGGPAC    ++LEDAE + D L     AG+L   + LAE L  LYA PD   G++A +++MT+HKAKGLEFDTVI+PGL R  R  D PL  WKS A+  +L+AP+R      + AY+Y+R L + AE  E  R+ YVAATRAA RLHL G  R + + G  + P   TLL K W++A
Sbjct:  349 PPSAFSEEQWAALGSVVEMLPRAAAELQVVFAERGEIDFTGIAQAAVQALGTEDEPTNLLLALDVKLQHLLVDEFQDTSHGQWELLTRLTSGWQP-DDGRTVFLVGDPMQSIYRFREADVSLFLRARSQGLPQVALADLRLATNFRSQAGVVEWVNKSFRAILPREEDPDEGAVPYSDSSAKHPLEPGPAVQWHPFLGTDMALAQER--EAVRVVEVVKAALVADASQTIAILVRNRSNLDSIVPAMRKANIRFRAVEIEQLEGRQVIQDLLAVTRALSHPADRVAWLGVLRAPWCALTLADLLALTGPLLSSEGARETLWELMADPSKLEGVSADGRARIARVRDTLAPFIEQRLRGTLRERVESAWLALGGPACAFSESDLEDAETYFDQLDRLQRAGELPDVAVLAEKLQRLYAAPD--TGEEARVQVMTIHKAKGLEFDTVIVPGLHRAPRISDRPLFAWKSRADGTILMAPVRPTRMEGEPAYDYLRGLSKAAEQHELERVLYVAATRAAKRLHLMGYARLKTEDGTIRRPPSTTLLGKAWSVA 892          
BLAST of mRNA_P-wetherbeei_contig14568.1.1 vs. uniprot
Match: A0A1F3YED6_9PROT (DNA helicase n=3 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F3YED6_9PROT)

HSP 1 Score: 552 bits (1422), Expect = 2.310e-181
Identity = 322/583 (55.23%), Postives = 385/583 (66.04%), Query Frame = 1
Query:    1 PPEASTATPWEALRAMLELLPRAVAELTVVFGERGQADFTEIAQGAVRALGDPEAPTDLLLALDVRIKHILVDEFQDTSISQWELLKCLTAGWQAGD--DGRTVFAVGDPMQSIYRFREAEVRLFLQAWHAGLTSVPLVPLRLATNFRSEAGIVDWVNATFPEVLPAEEDETSGAVPYAPSVAHHAAIEGDAVQWHLF---DERADEAQRVVEIARAARATDAAGSIAILVRNRSHLDCIVPALQQAGVRYRAVEIERLGEKQVVQDLYALTRALAHPADRAAWLAVLRAPWCGLSPAQLAALVE-------------GVR-------------------------DTVWEAMNDAERIALLDDDARSRLERVRGVLDAARAHRLRGNLRDRVEGVWLALGGPACCSDATELEDAEIFLDVLADEDDAGDLAAHSTLAESLAELYALPDMNAGDD-AIEIMTVHKAKGLEFDTVIMPGLDRRQRHGDPPLIIW--------KSLAEKALLLAPIREAGAAKDAAYEYVRSLERDAEDIEAGRLFYVAATRAASRLHLTGCIRRDDHG-EAKPPVKRTLLSKVW 1590
            PP   T   W+AL A+  LLP AVAEL +VF  R +ADF EIAQGA+ ALG+P+APTDLLL+LD RI HILVDEFQDTS +Q+ELL+ LTAGW  G+  DGRT+F VGDPMQSIYRFREAEV LFL+A + G+  V L  L LA NFRS+AGIV WVN  F EV+P  E+  +GAVPY+PS      +EGDAV  H F   D +A EA RV  +  AA+A D  G++A+LVRNRSHL+ IVP L+   VR+RA+EIE LG +QVVQDL ALTR+LAHPADR AWLA LRAPWCGL+ A L AL               G R                         DTVWE ++D  R+A L  DAR+R+ERVRGVL  A A+RLRG LRDRVE  WLALGGPAC  D T+LEDAEI+LD L   + AG++A  +   E LA+LYALPD+ A    A++IMT+HK+KGLEFDTVI+PGL R  R  DP L +W        +   E +LLLAPIRE GA  D  Y+Y+  LE D E  E GRL YVAATRA   LHL G  + D    E K P   +LL+K+W
Sbjct:  351 PPARYTDAQWDALGAIAHLLPIAVAELKLVFAARSEADFVEIAQGALAALGEPDAPTDLLLSLDYRIHHILVDEFQDTSFTQFELLEKLTAGWTGGEGADGRTLFLVGDPMQSIYRFREAEVGLFLRARNEGIGQVALEALTLAANFRSQAGIVAWVNRAFGEVMPHRENVAAGAVPYSPSTPVRP-VEGDAVCVHAFFNGDAQA-EAGRVAALIEAAQAADRDGTVAVLVRNRSHLEEIVPRLKARAVRFRAIEIEALGHRQVVQDLLALTRSLAHPADRLAWLAALRAPWCGLTLADLHALASAPLFLQGGGAGDAGARPDNQKDLFADLQALPASATDTVVKTDTVWELLHDEARLARLTADARTRIERVRGVLAHALANRLRGALRDRVEAAWLALGGPACVEDDTDLEDAEIYLDYLEQSEQAGEVADAAAFEEGLAKLYALPDLQADPKRAVQIMTIHKSKGLEFDTVILPGLGRVPRKRDPSLFLWMERDGSSARRKRESSLLLAPIRETGADADPTYDYLVRLEGDKESHEEGRLLYVAATRAKKHLHLLGSTKLDASAQELKTPAAGSLLAKLW 931          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14568.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00198839B11.440e-20959.27UvrD-helicase domain-containing protein n=1 Tax=Ca... [more]
A0A536XY24_9PROT1.650e-19957.12DNA helicase n=1 Tax=Betaproteobacteria bacterium ... [more]
A0A1F4F266_9PROT8.320e-19658.36DNA helicase n=1 Tax=Betaproteobacteria bacterium ... [more]
A0A177R3W8_9PROT2.460e-19554.23DNA helicase n=1 Tax=Betaproteobacteria bacterium ... [more]
A0A536Z4C8_9PROT2.870e-19457.54DNA helicase n=1 Tax=Betaproteobacteria bacterium ... [more]
A0A1F4FBE6_9PROT4.780e-18955.14DNA helicase n=1 Tax=Betaproteobacteria bacterium ... [more]
A0A521YT78_9PROT6.490e-18553.94DNA helicase n=1 Tax=Betaproteobacteria bacterium ... [more]
A0A1F4BKN8_9PROT8.100e-18456.15DNA helicase n=1 Tax=Betaproteobacteria bacterium ... [more]
A0A6M4H7L8_9PROT1.290e-18255.92DNA helicase n=1 Tax=Usitatibacter palustris TaxID... [more]
A0A1F3YED6_9PROT2.310e-18155.23DNA helicase n=3 Tax=unclassified Betaproteobacter... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14568contigP-wetherbeei_contig14568:1..1701 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1288494.EBAPG3_21040
Preferred nameaddA
PFAMsPDDEXK_1,UvrD-helicase,UvrD_C
Model size1701
Max annot lvl28216|Betaproteobacteria
KEGG koko:K03582
KEGG Pathwayko03440,map03440
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.84e-173
EggNOG OGsCOG1074@1|root,COG1074@2|Bacteria,1MUTF@1224|Proteobacteria,2VHNB@28216|Betaproteobacteria,371VU@32003|Nitrosomonadales
EC3.1.11.5
DescriptionBelongs to the helicase family. UvrD subfamily
Cds size1701
COG categoryL
BRITEko00000,ko00001,ko01000,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186026.2450702-CDS-P-wetherbeei_contig14568:0..17011683186026.2450702-CDS-P-wetherbeei_contig14568:0..1701Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14568 1..1701 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14568.1.1prot_P-wetherbeei_contig14568.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14568 1..1701 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14568.1.1

>prot_P-wetherbeei_contig14568.1.1 ID=prot_P-wetherbeei_contig14568.1.1|Name=mRNA_P-wetherbeei_contig14568.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=567bp
PPEASTATPWEALRAMLELLPRAVAELTVVFGERGQADFTEIAQGAVRAL
GDPEAPTDLLLALDVRIKHILVDEFQDTSISQWELLKCLTAGWQAGDDGR
TVFAVGDPMQSIYRFREAEVRLFLQAWHAGLTSVPLVPLRLATNFRSEAG
IVDWVNATFPEVLPAEEDETSGAVPYAPSVAHHAAIEGDAVQWHLFDERA
DEAQRVVEIARAARATDAAGSIAILVRNRSHLDCIVPALQQAGVRYRAVE
IERLGEKQVVQDLYALTRALAHPADRAAWLAVLRAPWCGLSPAQLAALVE
GVRDTVWEAMNDAERIALLDDDARSRLERVRGVLDAARAHRLRGNLRDRV
EGVWLALGGPACCSDATELEDAEIFLDVLADEDDAGDLAAHSTLAESLAE
LYALPDMNAGDDAIEIMTVHKAKGLEFDTVIMPGLDRRQRHGDPPLIIWK
SLAEKALLLAPIREAGAAKDAAYEYVRSLERDAEDIEAGRLFYVAATRAA
SRLHLTGCIRRDDHGEAKPPVKRTLLSKVWAIASAHVGPAQAPRAAAAAT
AVPPQTFKRFAPGFVLP
back to top

mRNA from alignment at P-wetherbeei_contig14568:1..1701+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14568.1.1 ID=mRNA_P-wetherbeei_contig14568.1.1|Name=mRNA_P-wetherbeei_contig14568.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1701bp|location=Sequence derived from alignment at P-wetherbeei_contig14568:1..1701+ (Phaeothamnion wetherbeei SAG_119_79)
CCGCCGGAGGCTTCCACGGCGACGCCATGGGAAGCGTTGCGCGCAATGCT GGAGCTGCTGCCGCGCGCGGTGGCCGAACTGACCGTCGTGTTCGGCGAGC GCGGGCAGGCCGATTTCACCGAAATCGCGCAGGGCGCGGTGCGCGCGCTG GGCGACCCCGAGGCGCCGACCGATCTGCTGCTGGCGCTCGACGTGCGCAT CAAGCACATACTCGTCGACGAATTCCAGGACACTTCGATCAGCCAGTGGG AATTGCTCAAGTGCCTCACCGCCGGCTGGCAGGCGGGCGACGACGGCCGC ACGGTATTTGCCGTCGGCGATCCGATGCAGTCGATCTATCGATTTCGCGA GGCCGAGGTCAGGCTCTTCCTGCAGGCGTGGCATGCAGGGCTCACCAGCG TGCCGCTGGTCCCGTTGCGCCTGGCGACCAATTTCCGTTCCGAGGCCGGC ATCGTCGATTGGGTGAACGCGACTTTCCCTGAAGTGCTGCCCGCCGAAGA GGATGAAACGTCCGGCGCGGTGCCGTACGCGCCCTCGGTTGCGCACCACG CGGCGATCGAGGGCGACGCCGTGCAATGGCATCTCTTCGACGAACGTGCC GACGAAGCGCAGCGCGTGGTCGAGATCGCGCGGGCGGCGCGCGCCACGGA CGCGGCGGGATCGATCGCCATACTGGTGCGCAATCGCAGCCATCTCGATT GCATCGTGCCGGCGCTGCAGCAGGCCGGCGTGCGCTATCGCGCGGTCGAG ATCGAACGGCTGGGCGAGAAGCAGGTGGTGCAGGATCTCTACGCCTTGAC GCGTGCGCTGGCGCATCCTGCTGATCGCGCGGCGTGGCTCGCGGTATTGC GCGCGCCGTGGTGCGGATTGTCGCCCGCGCAGCTCGCCGCACTCGTCGAA GGCGTGCGCGACACGGTATGGGAAGCGATGAACGATGCGGAGCGCATTGC ACTGCTCGATGACGACGCGCGCAGCCGGCTCGAACGCGTGCGCGGCGTGC TCGATGCGGCCCGCGCGCATCGCCTGCGCGGCAATCTGCGCGATCGCGTC GAAGGCGTGTGGCTGGCACTCGGCGGTCCGGCGTGCTGCAGCGATGCCAC CGAACTCGAAGACGCCGAAATTTTTCTCGACGTGCTGGCGGACGAAGATG ATGCGGGCGATCTTGCCGCGCACAGCACGTTGGCAGAGAGCCTCGCGGAG CTCTACGCATTGCCGGATATGAATGCGGGTGACGATGCCATCGAAATCAT GACCGTGCACAAGGCGAAGGGGCTGGAGTTCGACACCGTCATCATGCCGG GGCTCGACCGCCGGCAGCGCCACGGCGATCCGCCGCTCATCATCTGGAAG TCGCTGGCGGAAAAAGCCCTCTTGCTCGCGCCGATACGCGAGGCGGGTGC GGCGAAAGATGCCGCCTATGAGTACGTGCGCAGTCTCGAACGGGATGCCG AGGACATTGAGGCCGGGCGCCTGTTCTATGTCGCGGCGACGCGCGCCGCT TCGCGCCTGCACCTGACCGGCTGCATCAGGCGCGACGACCACGGTGAGGC CAAGCCGCCGGTGAAGCGGACCTTGCTGAGCAAAGTCTGGGCTATTGCGT CGGCGCATGTGGGTCCGGCACAGGCGCCGCGCGCAGCGGCCGCTGCGACT GCCGTGCCGCCGCAGACGTTCAAACGTTTTGCGCCGGGATTTGTGTTGCC G
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig14568:1..1701+

>mRNA_P-wetherbeei_contig14568.1.1 ID=mRNA_P-wetherbeei_contig14568.1.1|Name=mRNA_P-wetherbeei_contig14568.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1701bp|location=Sequence derived from alignment at P-wetherbeei_contig14568:1..1701+ (Phaeothamnion wetherbeei SAG_119_79)
CCGCCGGAGGCTTCCACGGCGACGCCATGGGAAGCGTTGCGCGCAATGCT
GGAGCTGCTGCCGCGCGCGGTGGCCGAACTGACCGTCGTGTTCGGCGAGC
GCGGGCAGGCCGATTTCACCGAAATCGCGCAGGGCGCGGTGCGCGCGCTG
GGCGACCCCGAGGCGCCGACCGATCTGCTGCTGGCGCTCGACGTGCGCAT
CAAGCACATACTCGTCGACGAATTCCAGGACACTTCGATCAGCCAGTGGG
AATTGCTCAAGTGCCTCACCGCCGGCTGGCAGGCGGGCGACGACGGCCGC
ACGGTATTTGCCGTCGGCGATCCGATGCAGTCGATCTATCGATTTCGCGA
GGCCGAGGTCAGGCTCTTCCTGCAGGCGTGGCATGCAGGGCTCACCAGCG
TGCCGCTGGTCCCGTTGCGCCTGGCGACCAATTTCCGTTCCGAGGCCGGC
ATCGTCGATTGGGTGAACGCGACTTTCCCTGAAGTGCTGCCCGCCGAAGA
GGATGAAACGTCCGGCGCGGTGCCGTACGCGCCCTCGGTTGCGCACCACG
CGGCGATCGAGGGCGACGCCGTGCAATGGCATCTCTTCGACGAACGTGCC
GACGAAGCGCAGCGCGTGGTCGAGATCGCGCGGGCGGCGCGCGCCACGGA
CGCGGCGGGATCGATCGCCATACTGGTGCGCAATCGCAGCCATCTCGATT
GCATCGTGCCGGCGCTGCAGCAGGCCGGCGTGCGCTATCGCGCGGTCGAG
ATCGAACGGCTGGGCGAGAAGCAGGTGGTGCAGGATCTCTACGCCTTGAC
GCGTGCGCTGGCGCATCCTGCTGATCGCGCGGCGTGGCTCGCGGTATTGC
GCGCGCCGTGGTGCGGATTGTCGCCCGCGCAGCTCGCCGCACTCGTCGAA
GGCGTGCGCGACACGGTATGGGAAGCGATGAACGATGCGGAGCGCATTGC
ACTGCTCGATGACGACGCGCGCAGCCGGCTCGAACGCGTGCGCGGCGTGC
TCGATGCGGCCCGCGCGCATCGCCTGCGCGGCAATCTGCGCGATCGCGTC
GAAGGCGTGTGGCTGGCACTCGGCGGTCCGGCGTGCTGCAGCGATGCCAC
CGAACTCGAAGACGCCGAAATTTTTCTCGACGTGCTGGCGGACGAAGATG
ATGCGGGCGATCTTGCCGCGCACAGCACGTTGGCAGAGAGCCTCGCGGAG
CTCTACGCATTGCCGGATATGAATGCGGGTGACGATGCCATCGAAATCAT
GACCGTGCACAAGGCGAAGGGGCTGGAGTTCGACACCGTCATCATGCCGG
GGCTCGACCGCCGGCAGCGCCACGGCGATCCGCCGCTCATCATCTGGAAG
TCGCTGGCGGAAAAAGCCCTCTTGCTCGCGCCGATACGCGAGGCGGGTGC
GGCGAAAGATGCCGCCTATGAGTACGTGCGCAGTCTCGAACGGGATGCCG
AGGACATTGAGGCCGGGCGCCTGTTCTATGTCGCGGCGACGCGCGCCGCT
TCGCGCCTGCACCTGACCGGCTGCATCAGGCGCGACGACCACGGTGAGGC
CAAGCCGCCGGTGAAGCGGACCTTGCTGAGCAAAGTCTGGGCTATTGCGT
CGGCGCATGTGGGTCCGGCACAGGCGCCGCGCGCAGCGGCCGCTGCGACT
GCCGTGCCGCCGCAGACGTTCAAACGTTTTGCGCCGGGATTTGTGTTGCC
G
back to top