mRNA_P-wetherbeei_contig10377.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10377.1.1 vs. uniprot
Match: D7G6A4_ECTSI (Rad51 DNA recombinase 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6A4_ECTSI) HSP 1 Score: 241 bits (614), Expect = 3.870e-74 Identity = 149/276 (53.99%), Postives = 188/276 (68.12%), Query Frame = 1 Query: 46 VRRLGLPEEIVESLCSNGLTSATDIFAKTEIQLAHTLDVDAATLTALLAVASARLAPP-AKTGADLLRER--AGTASSVATRLPTIDAALRGGLPVGMITEVVGPAGVGKSQMCLSAAAAAAMPAALGGLGEGTGVVYLDTERKFSAPRLAEIARQRWPGHYGDAAGEDGEGRLQALLSQVFVFTVDHSVDLLKKLESLQPFIIEKSVRIVILDSVAALARKDFGGGGGGIRPRNEALVRQAAVLKHLADAFSLVVLVTNQVMAARFNSATDGSSG 864 +RRLGL +++V L S GL +A D+F+KTE+QL +LD + LL S R+ P AKT DLLRER AG + VAT + +D AL+GG P GMITE+VGPAG+GK+Q CL AA A +PA LGGLGE GVVYLDTERKFS RL EIA +R PGHYG+ + E +G ++ LL+QV VF VD+S L+ +LE+LQ +IE +VR+++LDS+AALAR+DF R E L RQAAVLK LA FS VVLVTNQV + + T G G Sbjct: 7 LRRLGLDDDLVSRLASAGLHTAGDMFSKTELQLVQSLDASREKVVELLDYVSTRIVPEQAKTAGDLLRERREAGASFFVATGIQPLDDALQGGFPTGMITELVGPAGIGKTQTCLQVAAQACLPAKLGGLGEDAGVVYLDTERKFSPDRLVEIASERHPGHYGEFSTE--KGSMERLLNQVTVFPVDNSAALVDRLETLQARMIESNVRLIVLDSIAALARRDFARED--TLSRQELLTRQAAVLKSLAYTFSAVVLVTNQVTTSFY--PTSGLQG 276
BLAST of mRNA_P-wetherbeei_contig10377.1.1 vs. uniprot
Match: A0A2P6VC60_9CHLO (DNA repair RAD51-like protein 2 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VC60_9CHLO) HSP 1 Score: 172 bits (436), Expect = 2.270e-47 Identity = 112/264 (42.42%), Postives = 158/264 (59.85%), Query Frame = 1 Query: 31 MARRSVRRLGLPEEIVESLCSNGLTSATDIFAKTEIQLAHTLDVDAATLTALLAVASARLAPPAKTGADLLRERAGTASSVATRLPTIDAALRGGLPVGMITEVVGPAGVGKSQMCLSAAAAAAMPAALGGLGEGTGVVYLDTERKFSAPRLAEIARQRWPGHYGDAAGEDGEGRLQALLSQVFVFTVDHSVDLLKKLESLQPFIIEKSVRIVILDSVAALARKDFGGGGGGIRPRNEALVRQAAVLKHLADAFSLVVLVTNQV 822 MA R + R+GLP E+ + L + + A ++F++T + L LD+ T+ +L + R+ PP +T LLR A + T L +D AL GGLP G +TEVVGPAG+GK+Q+CL A A + EG V YLDTE+KFSA R+ +IA +R+P + + L AL ++V VF S DLL L+S++ II+ VR++ILDSVA+LAR DF G + R L +QA+ LK+LA+AF + VLVTNQV Sbjct: 1 MATRQLSRVGLPPELAQRLAARNINVARELFSRTIVDLVELLDLPYNTVRQILRQVAERITPPPQTALALLRTAAAQPLHLRTSLGPLDEALFGGLPAGSVTEVVGPAGLGKTQLCLQMAVLACLEREA----EGGSVAYLDTEKKFSAVRMRQIAGERFPDAF------PSKEALTALTARVLVFNPRSSSDLLATLQSIEAAIIDHRVRLLILDSVASLARADFAPGS--LPERQRMLGQQASRLKYLAEAFRIPVLVTNQV 252
BLAST of mRNA_P-wetherbeei_contig10377.1.1 vs. uniprot
Match: A0A6P4YVG7_BRABE (DNA repair protein RAD51 homolog 2-like isoform X7 n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4YVG7_BRABE) HSP 1 Score: 164 bits (416), Expect = 1.270e-44 Identity = 105/279 (37.63%), Postives = 166/279 (59.50%), Query Frame = 1 Query: 31 MARRSVRRLGLPEEIVESLCSNG-LTSATDIFAKTEIQLAHTLDVDAATLTALLAVASARLAPPAKTGADLLRE--RAGTASSVATRLPTIDAALRGGLPVGMITEVVGPAGVGKSQMCLSAAAAAAMPAALGGLGEGTGVVYLDTERKFSAPRLAEIARQRWPGHYGDAAGEDGEGRLQALLSQVFVFTVDHSVDLLKKLESLQPFIIEKSVRIVILDSVAALARKDFGGG-GGGIRPRNEALVRQAAVLKHLADAFSLVVLVTNQVMAARFNSATDG 855 M+ R +RRLGL E+V+ L + L+S DI K ++L H +++ + + ++ S AP T + + +G+A +T LP +D AL GG+P G +TE+ GPAG GK+Q C+ + A +P +GGLG VVY+DTE FSA RL E+A+ R P H+ + + L SQV+V DL +L+SL+ +IEK VR+V+LDSVA++ RK+F G + R + L ++AA+LK+LA++ ++ ++VTNQ+ RF ++ +G Sbjct: 1 MSLRKLRRLGLEPELVDRLERHKKLSSCQDILVKVHLELQHLTNLNHSDVQKIVTATSRACAPTPTTALQMKQAGLSSGSAPFFSTSLPGLDQALHGGIPAGSVTEIAGPAGCGKTQFCIMLSVLATLPCEMGGLGGA--VVYIDTESAFSAERLVEVAQDRCPHHFSN------DDAFYKLTSQVYVHKTPTCSDLWNRLQSLEEELIEKRVRLVVLDSVASVVRKEFDNSLRGNLAQRVKLLAKEAALLKYLAESLNIPIIVTNQI-TTRFKASWEG 270
BLAST of mRNA_P-wetherbeei_contig10377.1.1 vs. uniprot
Match: A0A2P6TEB6_CHLSO (H(+) Cl(-) exchange transporter 7 isoform X2 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TEB6_CHLSO) HSP 1 Score: 173 bits (438), Expect = 1.850e-44 Identity = 116/280 (41.43%), Postives = 167/280 (59.64%), Query Frame = 1 Query: 22 QNEMARRSVRRLGLPEEIVESLCSNGLTSATDIFAKTEIQLAHTLDVDAATLTALLAVASARLAPPAKTGADLLRERAGTASSVATRLPTIDAALRGGLPVGMITEVVGPAGVGKSQMCLSAAAAAAMPAALGGLGEGTGVVYLDTERKFSAPRLAEIARQRWPGHYGDAAGEDGEGRLQALLSQVFVFTVDHSVDLLKKL-ESLQPFIIEKSVRIVILDSVAALARKDFGGGGGGIRPRNEALVRQAAVLKHLADAFSLVVLVTNQVMAARFNSATDGS 858 +++MA R + R+GLP + + L + +A D+F +T ++L LD+ T+ +LA +A+++P +T ADLLR A + T L +DAAL GGLP G +TE+VG AG+GK+QMCL + EG VVYLDTE+KFS R+ +IAR+R+P + GE L AL S+V V++ +S LL L +SL+ +I+ VR++ILDS A LAR DF G + R L +QA+ LK+LA+AF + VLVTNQV R DG+ Sbjct: 1967 EHKMATRQLSRIGLPPPLQQRLAERNVQTARDLFQRTLLELVELLDLPYDTVRHILAEVAAKVSPQPRTVADLLRAAAAKPLLLRTSLGPLDAALLGGLPAGSVTELVGAAGLGKTQMCLQMCVLGCLERQA----EGASVVYLDTEKKFSGRRMTQIARERFPEAF------PGEEALAALASRVLVYSPPNSQALLSVLGQSLEQTVIDHKVRLIILDSAACLARADFAPGS--LPDRQRMLGQQASRLKYLAEAFQIPVLVTNQV-TTRIGGEGDGA 2233
BLAST of mRNA_P-wetherbeei_contig10377.1.1 vs. uniprot
Match: Q6Q241_CHLRE (Putative Rad51B protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=Q6Q241_CHLRE) HSP 1 Score: 165 bits (417), Expect = 3.600e-44 Identity = 126/289 (43.60%), Postives = 166/289 (57.44%), Query Frame = 1 Query: 31 MARRSVRRLGLPEEIVESLCSNGLTSATDIFAKTEIQLAHTLDVDAATLTALLAVASARLAPPAKTGADLLRERAGTASSVA---TRLPTIDAALRGGLPVGMITEVVGPAGVGKSQMCLSAAAAAAMPAALGGLGEGTGVVYLDTERKFSAPRLAEIARQRWPGHYGDAAGEDGEGRLQAL------LSQVFVFTVDHSVDLLKKLESLQPFIIEKSVRIVILDSVAALARKDFG------------GGGGG----IRPRNEALVRQAAVLKHLADAFSLVVLVTNQV 822 MA R V RL L + + L +N LT+A D+ + + L L + LLA SA+++PP T D+ ++A TA + A T LPT+D ALR G+PVG ITE+VGP GVGKSQ+ A A AMP ALGGL G GVVY+DTERKFSAPRL E+ R AAG LQ L L +V V T + L++ +E+LQ +++ R+V++DS+AALAR ++G GGGGG I R + L R AA LK LA++ + VLVTNQV Sbjct: 1 MATRHVSRLALDPYLRDHLIANNLTTARDVLLLSPLDLMELLGLTWTAAHQLLADVSAQISPPYSTAYDVFTQQA-TAEAPAPLRTGLPTLDGALRLGVPVGSITELVGPGGVGKSQLSHMLALAVAMPEALGGL--GAGVVYIDTERKFSAPRLQEMVHAR-VAEAAAAAGPQAAHVLQPLAVQGEVLRRVAVSTPGSTEQLMQTVENLQHTVLQYRARLVVVDSIAALARTEYGNPSSSGASGSVAGGGGGLVGSIMDRQQVLGRIAASLKALAESLRIPVLVTNQV 285
BLAST of mRNA_P-wetherbeei_contig10377.1.1 vs. uniprot
Match: A0A1Y1ICX6_KLENI (Putative DNA repair protein RAD51 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1ICX6_KLENI) HSP 1 Score: 164 bits (415), Expect = 6.910e-44 Identity = 108/277 (38.99%), Postives = 162/277 (58.48%), Query Frame = 1 Query: 31 MARRSVRRLGLPEEIVESLCSNGLTSATDIFAKTEIQLAHTLDVDAATLTALLAVASARLAPPAKTGADLLRERAGTAS-----------SVATRLPTIDAALRGGLPVGMITEVVGPAGVGKSQMCLSAAAAAAMPAALGGLGEGTGVVYLDTERKFSAPRLAEIARQRWPGHYGDAAGEDGEGRLQALLSQVFVFTVDHSVDLLKKLESLQPFIIEKSVRIVILDSVAALARKDFGGGGGGIRPRNEALVRQAAVLKHLADAFSLVVLVTNQVMA 828 M + + RL + + L S L +A D+ KTE+ L LD+ A + +A S +AP +T ++ ++ + T LP++D ALRGG+P+G ITE+VGPAGVGK+Q+CL + A +P +GGL +G VY+DTE KFSA RL EIA R P + D E +Q L S+V V + ++DLL +L+ L+ +I + ++++LDSVAAL R ++G ++ R + L RQAA+LK+LA+ F + V+VTNQVMA Sbjct: 1 MGSKEISRLNIEGLVAHRLKSRRLETAKDVLCKTELDLVELLDLPADVVAKAVAAISQNVAPTRRTVLEMYMDQQQPGDIQGGHLHTDLPKLPTNLPSLDDALRGGVPLGSITELVGPAGVGKTQLCLMLSIFATLPTDIGGL-DGK-CVYIDTENKFSAKRLIEIATMRLPDSFPD------EQAVQHLTSRVLVLRPNSAIDLLTRLQKLEEAMIREKAKLIVLDSVAALVRSEYGHDQ--LQQRQDLLGRQAALLKYLAETFRIPVVVTNQVMA 267
BLAST of mRNA_P-wetherbeei_contig10377.1.1 vs. uniprot
Match: UPI00160417F1 (DNA repair protein RAD51 homolog 2-like isoform X2 n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI00160417F1) HSP 1 Score: 162 bits (411), Expect = 7.290e-44 Identity = 108/279 (38.71%), Postives = 164/279 (58.78%), Query Frame = 1 Query: 31 MARRSVRRLGLPEEIVESLCSNG-LTSATDIFAKTEIQLAHTLDVDAATLTALLAVASARLAPPAKTGADLLRE--RAGTASSVATRLPTIDAALRGGLPVGMITEVVGPAGVGKSQMCLSAAAAAAMPAALGGLGEGTGVVYLDTERKFSAPRLAEIARQRWPGHYGDAAGEDGEGRLQALLSQVFVFTVDHSVDLLKKLESLQPFIIEKSVRIVILDSVAALARKDFGGG-GGGIRPRNEALVRQAAVLKHLADAFSLVVLVTNQVMAARFNSATDG 855 M+ R +RRLGL E+V+ L + L+S DI K ++L H ++ + + ++ AS AP T + +G+AS +T L +D AL GG+P G +TE+ GPAG GK+Q C+ + A +P +GGLG VVY+DTE FSA RL E+A+ R P H+ + L SQVFV DL +L+SL+ +I+K VR+VILDSVA++ RK+F G + R + L ++AA+LK+LA++ ++ V+VTNQ+ RF ++ +G Sbjct: 1 MSLRKLRRLGLEPELVDRLERHKKLSSCQDILVKIHLELLHLTNLTHSDVQKIVMTASRACAPTTTTALQMKEAGVSSGSASFFSTSLSGLDQALHGGIPAGSVTEIAGPAGCGKTQFCVMLSVLATLPCEMGGLGGA--VVYIDTESAFSAERLVEVAQFRCPQHFSS------DDAFYKLTSQVFVHKTPTCTDLWNRLQSLEEELIQKRVRLVILDSVASVVRKEFDNSLRGNLSQRVKLLAKEAALLKYLAESLNIPVVVTNQI-TTRFKASWEG 270
BLAST of mRNA_P-wetherbeei_contig10377.1.1 vs. uniprot
Match: A0A6P4Z3S1_BRABE (DNA repair protein RAD51 homolog 2-like isoform X1 n=6 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4Z3S1_BRABE) HSP 1 Score: 164 bits (416), Expect = 9.720e-44 Identity = 105/279 (37.63%), Postives = 166/279 (59.50%), Query Frame = 1 Query: 31 MARRSVRRLGLPEEIVESLCSNG-LTSATDIFAKTEIQLAHTLDVDAATLTALLAVASARLAPPAKTGADLLRE--RAGTASSVATRLPTIDAALRGGLPVGMITEVVGPAGVGKSQMCLSAAAAAAMPAALGGLGEGTGVVYLDTERKFSAPRLAEIARQRWPGHYGDAAGEDGEGRLQALLSQVFVFTVDHSVDLLKKLESLQPFIIEKSVRIVILDSVAALARKDFGGG-GGGIRPRNEALVRQAAVLKHLADAFSLVVLVTNQVMAARFNSATDG 855 M+ R +RRLGL E+V+ L + L+S DI K ++L H +++ + + ++ S AP T + + +G+A +T LP +D AL GG+P G +TE+ GPAG GK+Q C+ + A +P +GGLG VVY+DTE FSA RL E+A+ R P H+ + + L SQV+V DL +L+SL+ +IEK VR+V+LDSVA++ RK+F G + R + L ++AA+LK+LA++ ++ ++VTNQ+ RF ++ +G Sbjct: 1 MSLRKLRRLGLEPELVDRLERHKKLSSCQDILVKVHLELQHLTNLNHSDVQKIVTATSRACAPTPTTALQMKQAGLSSGSAPFFSTSLPGLDQALHGGIPAGSVTEIAGPAGCGKTQFCIMLSVLATLPCEMGGLGGA--VVYIDTESAFSAERLVEVAQDRCPHHFSN------DDAFYKLTSQVYVHKTPTCSDLWNRLQSLEEELIEKRVRLVVLDSVASVVRKEFDNSLRGNLAQRVKLLAKEAALLKYLAESLNIPIIVTNQI-TTRFKASWEG 270
BLAST of mRNA_P-wetherbeei_contig10377.1.1 vs. uniprot
Match: A0A8J9ZSB9_BRALA (RAD51B protein n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A8J9ZSB9_BRALA) HSP 1 Score: 162 bits (410), Expect = 3.340e-43 Identity = 108/279 (38.71%), Postives = 166/279 (59.50%), Query Frame = 1 Query: 31 MARRSVRRLGLPEEIVESLCSNG-LTSATDIFAKTEIQLAHTLDVDAATLTALLAVASARLAPPAKTGADLLRE--RAGTASSVATRLPTIDAALRGGLPVGMITEVVGPAGVGKSQMCLSAAAAAAMPAALGGLGEGTGVVYLDTERKFSAPRLAEIARQRWPGHYGDAAGEDGEGRLQALLSQVFVFTVDHSVDLLKKLESLQPFIIEKSVRIVILDSVAALARKDFGGG-GGGIRPRNEALVRQAAVLKHLADAFSLVVLVTNQVMAARFNSATDG 855 M+ R +RRLGL E+V+ L + L+S DI K ++L H ++ + + ++ AS AP T + + +G+ ++T LP +D AL GG+P G +TE+ GPAG GK+Q C+ + A +P +GGLG VVY+DTE FSA RL E+A+ R P H+ +D L SQV+V DL +L+ L+ +IEK VR+VILDSVA++ RK+F G + R + L ++AA+LK+LA++ ++ V+VTNQ+ RFN++ +G Sbjct: 1 MSLRKLRRLGLEPELVDRLERHKKLSSCQDILEKIHLELLHLTNLTHSDVQKIVMTASRACAPTPTTALQMRQAGFSSGSTPFLSTSLPGLDQALHGGIPAGSVTEIAGPAGCGKTQFCIMLSVLATLPCEMGGLGGA--VVYIDTESAFSAERLVEVAQGRCPQHF---CSDDA---FYKLTSQVYVHKTPTCTDLWNRLQCLEEELIEKRVRLVILDSVASVVRKEFDNSLRGNLSQRVKLLSKEAALLKYLAESLNIPVVVTNQI-TTRFNTSREG 270
BLAST of mRNA_P-wetherbeei_contig10377.1.1 vs. uniprot
Match: A0A8B7YX36_ACAPL (DNA repair protein RAD51 homolog 2-like isoform X2 n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7YX36_ACAPL) HSP 1 Score: 160 bits (406), Expect = 1.340e-42 Identity = 114/289 (39.45%), Postives = 168/289 (58.13%), Query Frame = 1 Query: 31 MARRSVRRLGLPEEIVESLCSNGLTSATDIFAKTEIQLAHTLDVDAATLTALLAVASARLAPPAKTGADLLRERAGTASSVA---TRLPTIDAALRGGLPVGMITEVVGPAGVGKSQMCLSAAAAAAMPAALGGLGEGTGVVYLDTERKFSAPRLAEIARQRWPGHYG-DAAGEDGEGRLQALLSQVFVFTVDHSVDLLKKLESLQPFIIEKSVRIVILDSVAALARKDFGGG-GGGIRPRNEALVRQAAVLKHLADAFSLVVLVTNQVMAA--RFNSATDGSSGAVST 876 M+ R ++RLG+ ++E L +G+ S D+ +KT ++L V + LT +L VAS R P +T A + + AG A T L +D L GGLP G I+E+ GP G GK+Q C+ + A +PAA+GGL +G V Y+DTE FSA RL E+AR R+P H+ D A AL S++ V+ LL +L++L+ +I K +R+++LDSVA+L RK+F G + R L +QAA+LK+LA+AFS+ V+VTNQ+ +SA GS+ T Sbjct: 29 MSSRKIQRLGIAPPVIERLHRHGVFSCQDLLSKTRLELLKMTGVTNSQLTNILLVAS-RACLPRQTTALSMYDAAGREECPAFFKTSLGQLDQVLHGGLPAGTISEIAGPPGCGKTQFCIMLSVLATLPAAMGGL-DGA-VAYIDTESAFSAERLVEVARCRFPVHFSCDEA-------YIALTSRIHVYQESTCCSLLARLQNLEEDLITKGIRLIVLDSVASLVRKEFDSSLRGNLIERTNLLSKQAAILKYLAEAFSIPVVVTNQITTRLRAQHSACQGSTDEAGT 307 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10377.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10377.1.1 >prot_P-wetherbeei_contig10377.1.1 ID=prot_P-wetherbeei_contig10377.1.1|Name=mRNA_P-wetherbeei_contig10377.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=321bp MARRSVRRLGLPEEIVESLCSNGLTSATDIFAKTEIQLAHTLDVDAATLTback to top mRNA from alignment at P-wetherbeei_contig10377:2..1638- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10377.1.1 ID=mRNA_P-wetherbeei_contig10377.1.1|Name=mRNA_P-wetherbeei_contig10377.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1637bp|location=Sequence derived from alignment at P-wetherbeei_contig10377:2..1638- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10377:2..1638- >mRNA_P-wetherbeei_contig10377.1.1 ID=mRNA_P-wetherbeei_contig10377.1.1|Name=mRNA_P-wetherbeei_contig10377.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=963bp|location=Sequence derived from alignment at P-wetherbeei_contig10377:2..1638- (Phaeothamnion wetherbeei SAG_119_79)back to top |