mRNA_P-wetherbeei_contig10372.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10372.1.1 vs. uniprot
Match: D7FZR4_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR4_ECTSI) HSP 1 Score: 352 bits (903), Expect = 1.320e-118 Identity = 176/276 (63.77%), Postives = 219/276 (79.35%), Query Frame = 1 Query: 7 MPPKKKSGDKKAANGEP--VLGEDPLVFLREYQKFARLIGVKANAQIVAALQDEENFPVEQLVINDEQGPLGPGGTRALTTALLGNGPEMRGGSYKLLKSLRMWRARCGDDGTACLAELLRLGGAAEVRLEYLELFDDEVGPKGALALGNALSIGCNQSLLTLKLDYNPRLGSDGAAALCRGLRTNAMLRQLHLPYCGVGPEGGGALGEVLAYGRCHLTVLNLQGNRIGADGLARMAPGLARNASLAFLSVADNEIGGCEADATALETFRDAMVSC 828 M PKK DKKA G V GEDP +FL+ YQ+F+RLIG+ AN ++VA LQ +EN P+ Q+V++DE GPLGPGGTRAL TA++G G +MRGG Y+L+KSLR+WRA CGD+G +AE+LRLGGA EV+LEY+ELFDD +GP GA ALG +LSIGCN+SLL+LKLDYNP LGS+G AALCRGLRTN+ L+QLHLPYC +G + G LGE+L+Y + L VLNLQGNR+ A+G ++PGLARN SL +LS+ADN IG +AD ALE FRDAM+SC Sbjct: 1 MGPKK--SDKKATKGVDGEVQGEDPALFLQNYQRFSRLIGISANPKVVAQLQSDENQPLAQIVVDDEHGPLGPGGTRALMTAIMGTGQDMRGGPYRLIKSLRLWRAHCGDEGARSIAEVLRLGGA-EVKLEYVELFDDNIGPTGATALGQSLSIGCNKSLLSLKLDYNPSLGSEGTAALCRGLRTNSSLKQLHLPYCDLGSDAGAPLGEMLSYTKLQLAVLNLQGNRLEAEGTKALSPGLARNRSLVYLSLADNGIGSGDADVDALEDFRDAMMSC 273
BLAST of mRNA_P-wetherbeei_contig10372.1.1 vs. uniprot
Match: A0A835YWH7_9STRA (Leucine rich repeat protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWH7_9STRA) HSP 1 Score: 352 bits (902), Expect = 2.630e-118 Identity = 175/274 (63.87%), Postives = 214/274 (78.10%), Query Frame = 1 Query: 7 MPPKKKSGDKKAANGEPVLGEDPLVFLREYQKFARLIGVKANAQIVAALQDEENFPVEQLVINDEQGPLGPGGTRALTTALLGNGPEMRGGSYKLLKSLRMWRARCGDDGTACLAELLRLGGAAEVRLEYLELFDDEVGPKGALALGNALSIGCNQSLLTLKLDYNPRLGSDGAAALCRGLRTNAMLRQLHLPYCGVGPEGGGALGEVLAYGRCHLTVLNLQGNRIGADGLARMAPGLARNASLAFLSVADNEIGGCEADATALETFRDAMVSC 828 MPPKKK+ KK NGE V GEDPL L YQKF RLIGV N ++V+ LQD+E+ P+ QLV++DE GPLGPGGTRALTT++LG G +M+GG YKLLK LR+WR C D+GT ++E+LRLGG +++LEYLE+ D VG GALALG AL+ GCN+SLL+LKLDYN LGS+GA ALCRGLRTNA LRQLHLPYCGVG + G ALGE+L+Y + L VLNLQGNR+G +GL +APGLARN S+ +LS+ADN IGG D AL FRDA+++C Sbjct: 1 MPPKKKAA-KKEHNGEAVAGEDPLQLLNNYQKFCRLIGVPINPKVVSQLQDQEHLPITQLVVDDEFGPLGPGGTRALTTSILGTGQDMKGGPYKLLKGLRLWRVNCADEGTRSISEILRLGGG-DIKLEYLEMLDCRVGGTGALALGQALAAGCNRSLLSLKLDYNQTLGSEGARALCRGLRTNATLRQLHLPYCGVGGDAGAALGEMLSYSKLQLAVLNLQGNRLGGEGLRDLAPGLARNGSVTYLSLADNAIGGVARDVEALALFRDAILAC 272
BLAST of mRNA_P-wetherbeei_contig10372.1.1 vs. uniprot
Match: A0A7S3HG08_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HG08_9STRA) HSP 1 Score: 293 bits (749), Expect = 3.340e-95 Identity = 154/273 (56.41%), Postives = 189/273 (69.23%), Query Frame = 1 Query: 7 MPPKKKSGDKKAANGEPVLGEDPLVFLREYQKFARLIGVKANAQIVAALQDEENFPVEQLVINDEQGPLGPGGTRALTTALLGNGPEMRGGSYKLLKSLRMWRARCGDDGTACLAELLRLGGAAEVRLEYLELFDDEVGPKGALALGNALSIGCNQSLLTLKLDYNPRLGSDGAAALCRGLRTNAMLRQLHLPYCGVGPEGGGALGEVLAYGRCHLTVLNLQGNRIGADGLARMAPGLARNASLAFLSVADNEIGGCEADATALETFRDAMVS 825 MPPKKK G KAA GE V GEDP+V L+ YQKF + IG+ N + L DEE +PV QL+I+DE GPLGPGGTRAL TA++G+G M+GG YKLL SLRMWRA C DDG A +AE+LRLGGA +V+L +LELFD+ +GPKGA ALG+ALS G N SLLTLKLDYN LG +G LC+GLRTNA L+QLHL +C + G AL EVLA R L V N+ GNR+G GLA + GL N + +ADN I E D L ++ +++ Sbjct: 5 MPPKKKEG--KAAAGEAVEGEDPVVLLQNYQKFCKSIGLPVNTIVTKNLNDEEKYPVHQLLIDDEFGPLGPGGTRALMTAVMGSGAGMKGGPYKLLNSLRMWRANCSDDGAAAIAEILRLGGA-DVKLSFLELFDNNIGPKGANALGSALSYGHNLSLLTLKLDYNATLGDEGVINLCKGLRTNATLKQLHLQFCNLSSASGPALSEVLANSRSGLEVFNIGGNRLGGQGLASLCVGLMHNTKCETICLADNMIDQMEDDIIGLTALKECLLN 274
BLAST of mRNA_P-wetherbeei_contig10372.1.1 vs. uniprot
Match: A0A7S2XX61_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX61_9STRA) HSP 1 Score: 248 bits (632), Expect = 1.390e-79 Identity = 126/196 (64.29%), Postives = 149/196 (76.02%), Query Frame = 1 Query: 7 MPPKKKSGDKKAANGEPVLGEDPLVFLREYQKFARLIGVKANAQIVAALQDEE-NFPVEQLVINDEQGPLGPGGTRALTTALLGNGPEMRGGSYKLLKSLRMWRARCGDDGTACLAELLRLGGAAEVRLEYLELFDDEVGPKGALALGNALSIGCNQSLLTLKLDYNPRLGSDGAAALCRGLRTNAMLRQLHLPYC 591 M PKKK KK + E V GEDP + L+ Y KF++LI + N QIV DEE PVEQLV++D +G LGPGGTRAL TA+LG GP M+GG YK LKSLR+WR GDDG C+AELLRLGG +V + YLELFD+ +GP+GALALGNALS G NQSL+TLKLDYN LG++G AALCRGLRTN+ L+QLHLPYC Sbjct: 1 MAPKKKGDKKKKQDVEGVQGEDPAILLQNYVKFSKLIAIPVNQQIVDTCSDEELEGPVEQLVVDDRKGVLGPGGTRALCTAILGTGPGMQGGPYKKLKSLRLWRCNVGDDGAQCMAELLRLGGG-DVVIPYLELFDNNIGPRGALALGNALSFGTNQSLMTLKLDYNISLGAEGTAALCRGLRTNSTLKQLHLPYC 195
BLAST of mRNA_P-wetherbeei_contig10372.1.1 vs. uniprot
Match: A0A482S5Z2_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S5Z2_9ARCH) HSP 1 Score: 243 bits (620), Expect = 3.010e-76 Identity = 129/236 (54.66%), Postives = 162/236 (68.64%), Query Frame = 1 Query: 121 VKANAQIVAALQDEENFPVEQLVINDEQGPLGPGGTRALTTALLGNGPEMRGGSYKLLKSLRMWRARCGDDGTACLAELLRLGGAAEVRLEYLELFDDEVGPKGALALGNALSIGCNQSLLTLKLDYNPRLGSDGAAALCRGLRTNAMLRQLHLPYCGVGPEGGGALGEVLAYGRCHLTVLNLQGNRIGADGLARMAP-GLARNASLAFLSVADNEIGGCEADATALETFRDAMVS 825 + N+ I L DEE +P+EQL+I+DE GPLGPGGTRAL TA++G+GP M+GG YKLLKSLR+WRA CGDDG A +AE+LRLGGA +V L YLEL D+ + +GA ALG++LS G N SLLTLKLDYN LG DG ALCRGLRTN LRQLHL +C + G AL ++LA R L VLN+ GNR+ G+ + GL N L+++DN I E D L RD +++ Sbjct: 1 MSTNSLIGRTLNDEEKYPIEQLLIDDELGPLGPGGTRALMTAIMGSGPGMKGGPYKLLKSLRLWRANCGDDGAAAIAEVLRLGGA-DVALTYLELLDNNISIRGATALGSSLSFGHNISLLTLKLDYNQTLGDDGLVALCRGLRTNMSLRQLHLQFCNLTSASGHALADLLANSRSALEVLNVAGNRLTGQGVYVLCTKGLVVNTKCETLNLSDNLIDQLEEDLAGLTALRDCLMT 235
BLAST of mRNA_P-wetherbeei_contig10372.1.1 vs. uniprot
Match: A0A8J2X6V8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X6V8_9STRA) HSP 1 Score: 233 bits (595), Expect = 6.660e-72 Identity = 136/276 (49.28%), Postives = 175/276 (63.41%), Query Frame = 1 Query: 7 MPPKKKSGDKKAANGEPVLGEDPLVFLREYQKFARLIGVKANAQIVAALQ-DEENFPV----EQLVINDEQGPLGPGGTRALTTALLGNGPEMRGGSYKLLKSLRMWRARCGDDGTACLAELLRLGGAAEVRLEYLELFDDEVGPKGALALGNALSIGCNQSLLTLKLDYNPRLGSDGAAALCRGLRTNAMLRQLHLPYCGVGPEGGGALGEVLAYGRCHLTVLNLQGNRIGADGLARMAPGLARNASLAFLSVADNEIGGCEADATALETFRDAM 819 MPPKKK G +A +P + Y+K+ +L + + +++A L DEE + EQLVI+ E LGP GTRAL TAL+GN P M G +K+ K+ R WR CGDDG ACLAE+LRLGGA E+ + YLE+ D VG +GA ALG +L G N+SLLTLKLDYN LGSDG ALC+GLRTNA L+QLHL YCG+ + G LGEVL+Y + L L+LQGN++ GL+ + G+ N L +LS+ADN I + D ALE M Sbjct: 1 MPPKKKGG---SAIDPDDPSMNPEAVVDNYKKYCKLAALTPHPKVLAQLGGDEEQLEIMMKNEQLVIDGEP-VLGPHGTRALCTALMGNAPGMSGAVFKMAKNFRFWRMDCGDDGAACLAEILRLGGA-ELPMAYLEMLDCGVGYRGAHALGQSLMCGQNRSLLTLKLDYNSSLGSDGCKALCQGLRTNASLKQLHLCYCGLDEDAGAPLGEVLSYAKTTLQKLHLQGNKMRGGGLSGILSGMDNNNKLEYLSLADNAIAATDEDLEALEQLAGVM 271
BLAST of mRNA_P-wetherbeei_contig10372.1.1 vs. uniprot
Match: A0A7S1XUG2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUG2_9STRA) HSP 1 Score: 218 bits (556), Expect = 1.820e-63 Identity = 132/262 (50.38%), Postives = 165/262 (62.98%), Query Frame = 1 Query: 7 MPPKKKSGDKKAANGEPVLGE--DPLVFLREYQKFARLIGVKANAQIVAALQDEENFPVEQLVINDEQGPLGPGGTRALTTALL---GNGPEMRG-GSYKLLKSLRMWRARCGDDGTACLAELLRLGGAAEVRLEYLELFDDEVGPKGALALGNALSIGCNQSLLTLKLDYNPRLGSDGAAALCRGLRTNAMLRQLHLPYCGVGPEGGGALGEVLAYGRCHLTVLNLQGNRIGADGLARMAPGLARNASLAFLSVADNEIGG 774 M PKKK G K A G+ E +PL + K + IG + N +VA LQ EE F Q++I+ E P+GP G RAL TA+L G + G G Y L SLR+W GDDG + +AE+LRLGGA EV++ YLEL D V P GA LG ALS G N SLLTLKL+ N LGS G AALCRGLR+N++L+QLHL +C +GP+GGG L E L+Y R L VL ++GNR+G GL +A G+ N SL L V+DN I G Sbjct: 250 MGPKKKGGKKAAPAGDGKEDESANPLTLCTNFTKICKTIGQQPNPGLVAQLQSEE-FSKTQIIIDGEP-PIGPAGMRALATAVLAPPGTPGLVAGCGPYTPLSSLRVWGGGLGDDGVSAVAEILRLGGA-EVKISYLELLDSGVSPYGARMLGRALSYGSNMSLLTLKLNCNLNLGSAGVAALCRGLRSNSVLKQLHLEFCNIGPDGGGPLAEALSYSRTALQVLCMKGNRLGNVGLRDLATGIQLNQSLTTLDVSDNAING 508
BLAST of mRNA_P-wetherbeei_contig10372.1.1 vs. uniprot
Match: A0A7R9U7G5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7G5_9STRA) HSP 1 Score: 177 bits (448), Expect = 4.290e-50 Identity = 110/254 (43.31%), Postives = 151/254 (59.45%), Query Frame = 1 Query: 85 LREYQKFARLIGVKANAQIVAALQ--DEE---NFPVEQLVINDEQGPLGPGGTRALTTALLG--NGPEMRGGSYKLLKSLRMWRARCGDDGTACLAELLRLGGAAEVRLEYLELFDDEVGPKGALALGNALSIGCNQSLLTLKLDYNPRLGSDGAAALCRGLRTNAMLRQLHLPYCGVGPEGGGALGEVLAYGRCHLTVLNLQGNRIGADGLARMAPGLARNASLAFLSVADNEIGGCEADATALETFRDAMVS 825 LR ++ RL+ N +I++ L DE+ V ++V+ + L PG RAL ALL +M G Y LK+L++WR+ G G + +AELLRLGGA +++L LEL D V GA+ALG +L+ G N SL L+LDYNP +GS+G AAL RGLRTN L +LH +C +GPE G L ++L + + L VLN+QGNR+ GL +A GL N++L L+VADN IG E D AL + S Sbjct: 12 LRNFKCMCRLLNEDINQEILSQLSISDEDAKKGKGVSEIVVEAD---LTPGNARALAAALLAPPGMSKMLGDVYTALKTLKIWRSNLGASGVSAIAELLRLGGA-DLQLALLELVDAGVEIDGAVALGRSLATGMNVSLRILRLDYNPGIGSEGIAALSRGLRTNRSLEELHACFCSLGPEAGVFLADILEFSQSSLRVLNVQGNRLEGVGLNDVAHGLMENSALLELNVADNAIGNSELDVVALRVLAQVISS 261
BLAST of mRNA_P-wetherbeei_contig10372.1.1 vs. uniprot
Match: A0A7S2G5E5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G5E5_9STRA) HSP 1 Score: 177 bits (448), Expect = 1.170e-49 Identity = 116/278 (41.73%), Postives = 148/278 (53.24%), Query Frame = 1 Query: 7 MPPKKKSGDKKAANGEPVLGEDPLVFLREYQKFARLIGVKANAQIVAALQDEENFPVEQLVI--NDEQGP----LGPGGTRALTTALLGNGPEMRGGSYKLLKSLRMWRARCGDDGTACLAELLRLGGAAEVRLEYLELFDDEVGPKGALALGNALSIGCNQSLLTLKLDYNPRLGSDGAAALCRGLRTNAMLRQLHLPYCGVGPEGGGALGEVLAYGRCHLTVLNLQGNRIGADGLARMAPGLARNASLAFLSVADNEIGGCEADATALETFRDAMV 822 MPPKKK G KK+ N EP GEDP FL +Y+KF ++ + QI A DEEN Q VI N+ P LGPGGTRAL TA++G GP M +K +KSLR+W + GDDG LAELLRLGGA E+++ YL GLRTN+ L+QLHLPYC + G L E+L+Y R LT+LNL+GN+I GL + PGL ++ SL L ++DN+IG E D AL F A++ Sbjct: 35 MPPKKKDGAKKS-NAEPDPGEDPETFLAQYKKFCKMTAIPECEQITQAFSDEENPYAGQFVIHPNEPMDPTEPRLGPGGTRALATAIMGTGPGMVT-PFKSVKSLRIWWSNIGDDGCQALAELLRLGGA-EIQINYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLRTNSSLKQLHLPYCNLDSAVGQPLSEMLSYTRLGLTMLNLKGNQIRGQGLLELCPGLEKSKSLVDLDLSDNDIG--EQDIEALNAFAVALM 307
BLAST of mRNA_P-wetherbeei_contig10372.1.1 vs. uniprot
Match: A0A813A1V5_9DINO (Rnh1 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813A1V5_9DINO) HSP 1 Score: 175 bits (443), Expect = 2.440e-49 Identity = 111/273 (40.66%), Postives = 157/273 (57.51%), Query Frame = 1 Query: 7 MPPKKKSGDKKAANGEPVLGEDPLVFLREYQKFARLIGVKANAQIVAAL------QDEENFPVEQLVINDEQGPLGPGGTRALTTALLGNGPEMRGGSYKLLKSLRMWRARCGDDGTACLAELLRLGGAAEVRLEYLELFDDEVGPKGALALGNALSIGCNQSLLTLKLDYNPRLGSDGAAALCRGLRTNAMLRQLHLPYCGVGPEGGGALGEVLAYGRCHLTVLNLQGNRIGADGLARMAPGLARNASLAFLSVADNEIGGCEADATALETF 807 MPPK+KS D+ V E+ L L Y++ + +G+ + +++A+L + +E ++Q+ ++ + G LG TRAL A+LG G M+ Y L+SLR W A GD G A +A LL++G V L +E + VGP+G ALG+AL +G N SL TL LD NP + G LC GLR+N L +L L YC V +G AL EVL+ C L L+L GNR+G++GLA +A GLA N SL L++ADN IG DA ++ Sbjct: 1 MPPKRKSQDE-------VDYEEEL--LSNYKRVCKALGIPESKELLASLFPAEQSKGKEAEHIQQVCVDSKLGALG---TRALAAAVLGKGQGMKS-HYPFLRSLRFWEAETGDAGVAAVAALLKVGPPL-VALGNVEFMNCGVGPEGCWALGDALMLGANTSLQTLSLDINPGIADAGTMQLCEGLRSNPTLTKLQLSYCEVAADGAAALAEVLSMPTCALKSLDLSGNRLGSEGLASLASGLAANTSLEELNLADNGIGATVDDAMTIDAL 259 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10372.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10372.1.1 >prot_P-wetherbeei_contig10372.1.1 ID=prot_P-wetherbeei_contig10372.1.1|Name=mRNA_P-wetherbeei_contig10372.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=274bp MPPKKKSGDKKAANGEPVLGEDPLVFLREYQKFARLIGVKANAQIVAALQback to top mRNA from alignment at P-wetherbeei_contig10372:3..2238- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10372.1.1 ID=mRNA_P-wetherbeei_contig10372.1.1|Name=mRNA_P-wetherbeei_contig10372.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2236bp|location=Sequence derived from alignment at P-wetherbeei_contig10372:3..2238- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10372:3..2238- >mRNA_P-wetherbeei_contig10372.1.1 ID=mRNA_P-wetherbeei_contig10372.1.1|Name=mRNA_P-wetherbeei_contig10372.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=822bp|location=Sequence derived from alignment at P-wetherbeei_contig10372:3..2238- (Phaeothamnion wetherbeei SAG_119_79)back to top |