mRNA_P-wetherbeei_contig14530.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14530.1.1 vs. uniprot
Match: A0A2P4XPH2_9STRA (RxLR effector candidate protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XPH2_9STRA) HSP 1 Score: 162 bits (411), Expect = 2.010e-45 Identity = 85/188 (45.21%), Postives = 121/188 (64.36%), Query Frame = 2
Query: 317 PLRELVGAVLYLAVTTQPDIFDQVRALTRCCHDPRRPDWLAALWLLRYLEGTREKGLLYSRSTAARVPTPGAAIGYADADWARDLDSRRSVGAYVFL*SGAAVSWRSKMQDCTAASTCDAEYVAAAYAVQHALWLRRLARGLGLGVTAPTPIHEDNQPCSDIATNLFSERRVKHIDIKFHIVRERVES 880
P RELVGA++YLA +T+P+I V + + C + W+AA +L+YL+ T++ GL+++ G +GYADA+WA DLD+RRS YVF +G+A+SW+SK Q A S+ +AEY+A A+Q A+WLR+L + LG T I++DNQ C +A N R KHIDIKFH +RE+VES
Sbjct: 21 PCRELVGALMYLATSTRPNIAYAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDVGLVFNGGIK------GELVGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNAIQEAVWLRQLLKDLGYENKGATTIYQDNQGCIALAKNPAYHTRTKHIDIKFHFLREKVES 202
BLAST of mRNA_P-wetherbeei_contig14530.1.1 vs. uniprot
Match: A0A4Y9Y4W2_9AGAM (Uncharacterized protein n=1 Tax=Dentipellis fragilis TaxID=205917 RepID=A0A4Y9Y4W2_9AGAM) HSP 1 Score: 173 bits (438), Expect = 5.600e-45 Identity = 99/240 (41.25%), Postives = 140/240 (58.33%), Query Frame = 2
Query: 155 TIHLSQPHYIDELLARFRMSAAWPVQTPTCPGAPPRSTFRAPATAAEAAEMAGKPLRELVGAVLYLAVTTQPDIFDQVRALTRCCHDPRRPDWLAALWLLRYLEGTREKGLLYSRSTAARVPTPGAAIGYADADWARDLDSRRSVGAYVFL*SGAAVSWRSKMQDCTAASTCDAEYVAAAYAVQHALWLRRLARGLGLGVTAPTPIHEDNQPCSDIATNLFSERRVKHIDIKFHIVRERV 874
TI LSQ HY+ +L RFRM PV TP P A S + PAT E +M G ++GAV+Y ++ T+PD+ V++L++ +P R AA +LRY++GT + L+Y RVP +GY DAD D D+R+SV YVF +G+ +SW SK Q A ST AEY+A A+A + ALWLR L + L G+++P +H DNQ ++ + R KH+DIK+H +RE V
Sbjct: 1236 TITLSQTHYLRNVLKRFRMDDCNPVSTPMDP-AVHLSKAQCPATQDEIDDMRGNEYSSIIGAVMYASMATRPDLAYTVQSLSQFMANPGRAHLAAAKRVLRYIKGTLDLALVYGGDLPQRVP-----VGYTDADHGNDPDARKSVSGYVFFLAGSVISWSSKKQPTVADSTAVAEYIAIAHATKEALWLRSLLKELDFGLSSPMILHCDNQASISMSKDHVYHARTKHVDIKYHFIREHV 1469
BLAST of mRNA_P-wetherbeei_contig14530.1.1 vs. uniprot
Match: H3GB17_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB17_PHYRM) HSP 1 Score: 166 bits (419), Expect = 8.860e-45 Identity = 97/241 (40.25%), Postives = 136/241 (56.43%), Query Frame = 2
Query: 155 TIHLSQPHYIDELLARFRMSAAWPVQTPTCPGAPPRSTFRAPATAAEAAEMAGKPLRELVGAVLYLAVTTQPDIFDQVRALTRCCHDPRRPDWLAALWLLRYLEGTREKGLLYSRSTAARVPTPGAAIGYADADWARDLDSRRSVGAYVFL*SGAAVSWRSKMQDCTAASTCDAEYVAAAYAVQHALWLRRLARGLGLGVTAPTPIHEDNQPCSDIATNLFSERRVKHIDIKFHIVRERVE 877
TI ++Q YI L +F + V TP S + A + + P RELVGA++YLA T+PDI V + + C + W+AA +L+YL+ T++ GL+++ T G IGYADA WA DLD+RRS YVF +G+A+SW+SK Q A S+ +AEY+A A Q A+WLR+L +G A T I +DNQ C +A N R KHID+K+H +RE+VE
Sbjct: 141 TIVMNQRAYIQRLAEKFGVEKCKAVHTPA------DSNSKLVKPAEDEVFVPRYPYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDLGLVFNGGTK------GELIGYADASWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVAATTIFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVE 369
BLAST of mRNA_P-wetherbeei_contig14530.1.1 vs. uniprot
Match: H3GB69_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB69_PHYRM) HSP 1 Score: 161 bits (407), Expect = 5.560e-44 Identity = 94/241 (39.00%), Postives = 135/241 (56.02%), Query Frame = 2
Query: 155 TIHLSQPHYIDELLARFRMSAAWPVQTPTCPGAPPRSTFRAPATAAEAAEMAGKPLRELVGAVLYLAVTTQPDIFDQVRALTRCCHDPRRPDWLAALWLLRYLEGTREKGLLYSRSTAARVPTPGAAIGYADADWARDLDSRRSVGAYVFL*SGAAVSWRSKMQDCTAASTCDAEYVAAAYAVQHALWLRRLARGLGLGVTAPTPIHEDNQPCSDIATNLFSERRVKHIDIKFHIVRERVE 877
TI ++Q YI L +F + V TP S + + + + P RELVGA++YLA T+PDI V + + C + W+AA +L+YL+ T++ GL+++ T G IGYADA+WA DLD+RRS YVF +G+A+SW+SK Q A S+ +AEY+A A Q A+WLR+L +G T +DNQ C +A N R KHID+K+H +RE+VE
Sbjct: 45 TIVMNQRAYIQRLAEKFGVEKCKAVHTPA------DSNSKLVKPSEDEDFVPRYPYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDLGLVFNGGTK------GELIGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVGATTFFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVE 273
BLAST of mRNA_P-wetherbeei_contig14530.1.1 vs. uniprot
Match: A0A7D9KES8_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KES8_PARCT) HSP 1 Score: 168 bits (426), Expect = 6.170e-44 Identity = 101/242 (41.74%), Postives = 132/242 (54.55%), Query Frame = 2
Query: 158 IHLSQPHYIDELLARFRMSAAWPVQTPTCPGAPPRSTFRAPATAAEAAEMAGKPLRELVGAVLYLAVTTQPDIFDQVRALTRCCHDPRRPDWLAALWLLRYLEGTREKGLLYSRSTAARVPTPGAAIGYADADWARDLDSRRSVGAYVFL*SGAAVSWRSKMQDCTAASTCDAEYVAAAYAVQHALWLRRLARGLGLGVTAPTPIHEDNQPCSDIATNLFSERRVKHIDIKFHIVRERVESG 883
I + Q Y +L RF M ++ P TP PG + + A ++ + + VG +LYL+ T+PDI V + R DP W+A ++RYL GTR+ GLLY S T + +GY+DADWA DLD R+S YVF S AA+SWRSK Q C A ST +AEY+A A A Q A+WL++L L T P I EDNQ +A N R KHIDIK+H +RE V S
Sbjct: 228 IWIGQEAYTKSVLERFGMESSKPASTPVNPG----TKLKKAADDSQRVDQVN--YQCAVGHLLYLSTKTRPDIAYAVSDVARFSADPTEEHWIAVKRIMRYLNGTRDMGLLYDGSK-----TTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSKKQSCVALSTAEAEYMALASATQEAVWLQQLLSDLKSKPTGPMLILEDNQAAICMAKNAQYHGRAKHIDIKYHFIREHVASA 458
BLAST of mRNA_P-wetherbeei_contig14530.1.1 vs. uniprot
Match: UPI001C093D0F (LOW QUALITY PROTEIN: secreted RxLR effector protein 161-like n=1 Tax=Alosa sapidissima TaxID=34773 RepID=UPI001C093D0F) HSP 1 Score: 159 bits (401), Expect = 7.640e-44 Identity = 92/200 (46.00%), Postives = 119/200 (59.50%), Query Frame = 2
Query: 287 AAEAAEMAGKPL-RELVGAVLYLAVTTQPDIFDQVRALTRCCHDPRRPDWLAALWLLRYLEGTREKGLLYSRSTAARVPTPGAAIGYADADWARDLDSRRSVGAYVFL*SGAAVSWRSKMQDCTAASTCDAEYVAAAYAVQHALWLRRLARGLGLGVTAPTPIHEDNQPCSDIATNLFSERRVKHIDIKFHIVRERVESG 883
A+E +E K L + VG++LYL+ T+PDI V + C DP + W A +LRYL GT+ GLLYS++T IGY+DADWA DLD R+SV Y+F SGAAVSW+SK Q ST +AEY+A A A Q A+W+R+L L T I+EDNQ +A N R KHIDIK H +R++V SG
Sbjct: 15 ASEDSEKVEKALYQSAVGSLLYLSTRTRPDIAFAVSNVASFCSDPTKQHWTAVKRILRYLNGTQPLGLLYSKNTEKEC------IGYSDADWAGDLDDRKSVSGYMFKMSGAAVSWKSKKQSXVLLSTAEAEYMALASAAQEAVWMRQLLSDLKNCPAGATVIYEDNQSAICMARNPQFHGRAKHIDIKHHFIRDQVASG 208
BLAST of mRNA_P-wetherbeei_contig14530.1.1 vs. uniprot
Match: A0A8H6XNZ2_9AGAR (Uncharacterized protein n=1 Tax=Mycena sanguinolenta TaxID=230812 RepID=A0A8H6XNZ2_9AGAR) HSP 1 Score: 169 bits (428), Expect = 1.190e-43 Identity = 97/246 (39.43%), Postives = 147/246 (59.76%), Query Frame = 2
Query: 149 AGTIHLSQPHYIDELLARFRMSAAWPVQTPTCPGAPPRSTFRAPATAAEA-AEMAGKPLRELVGAVLYLAVTTQPDIFDQVRALTRCCHDPRRPDWLAALWLLRYLEGTREKGLLYSRSTAARVPTPGAAIGYADADWARDLDSRRSVGAYVFL*SGAAVSWRSKMQDCTAASTCDAEYVAAAYAVQHALWLRRLARGLGLGVTAPTPIHEDNQPCSDIATNLFSERRVKHIDIKFHIVRERVESG 883
+GTI LSQ HY++ LLA++ ++ A P+ TP P R + PA A EA AE+ G+ + ++G ++Y A+ T+PDI V L++ C +P W A +LRYL GTR GL+Y ++ + + GY+DAD+A ++D R+S+ Y F+ GAA +W SK Q A S+ +AEY A A+A + A+W R L +G T+ T IHEDNQ +A + R KH D++ H +RE++E+G
Sbjct: 1137 SGTITLSQLHYVETLLAKYGLTDAKPLATPMDPNVTLR---KVPADAPEAPAELRGQ-YQSIIGGLMYAAICTRPDIAYAVTTLSQYCSNPGPEHWSACKRVLRYLSGTRNYGLVYGNTSDSDEIV---STGYSDADYAANVDDRKSISGYAFMLGGAAYAWSSKKQSTVATSSTEAEYTALAHATRFAVWSRYLFSEIGYAQTSSTIIHEDNQAALALARDPQYHARSKHFDVQNHFIREKIENG 1375
BLAST of mRNA_P-wetherbeei_contig14530.1.1 vs. uniprot
Match: A0A498M2F0_LABRO (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Labeo rohita TaxID=84645 RepID=A0A498M2F0_LABRO) HSP 1 Score: 168 bits (425), Expect = 1.260e-43 Identity = 96/244 (39.34%), Postives = 135/244 (55.33%), Query Frame = 2
Query: 152 GTIHLSQPHYIDELLARFRMSAAWPVQTPTCPGAPPRSTFRAPATAAEAAEMAGKPLRELVGAVLYLAVTTQPDIFDQVRALTRCCHDPRRPDWLAALWLLRYLEGTREKGLLYSRSTAARVPTPGAAIGYADADWARDLDSRRSVGAYVFL*SGAAVSWRSKMQDCTAASTCDAEYVAAAYAVQHALWLRRLARGLGLGVTAPTPIHEDNQPCSDIATNLFSERRVKHIDIKFHIVRERVESG 883
G I + Q Y + +L +F M + PV TP + + ++ M K + VG++LYL+ T+PDI V + R C P + W A ++RYL+GT GLLY++ P IG++DADWA D + R+S+ Y+F SGAAVSWRSK Q C A ST +AEY+A A A Q A+W+R+L L + PT + EDNQ +A N R KHIDIK+H +RE++ G
Sbjct: 480 GEIWMGQATYAENVLKKFGMENSKPVSTPV------DINTKLVKHSDDSEVMDPKQFQSAVGSLLYLSTRTRPDIAYAVNNVARFCAKPTKQHWTAVKRIMRYLKGTLNLGLLYNKDK------PKECIGFSDADWAGDQNDRKSMSGYMFQISGAAVSWRSKKQTCVALSTAEAEYMALASAAQEAVWMRQLMTDLKVNQAGPTVMFEDNQSAICMAKNSQFHGRAKHIDIKYHFIREKIAGG 711
BLAST of mRNA_P-wetherbeei_contig14530.1.1 vs. uniprot
Match: A0A151QYP0_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151QYP0_CAJCA) HSP 1 Score: 161 bits (407), Expect = 2.730e-43 Identity = 92/242 (38.02%), Postives = 134/242 (55.37%), Query Frame = 2
Query: 158 IHLSQPHYIDELLARFRMSAAWPVQTPTCPGAPPRSTFRAPATAAEAAEMAGKPLRELVGAVLYLAVTTQPDIFDQVRALTRCCHDPRRPDWLAALWLLRYLEGTREKGLLYSRSTAARVPTPGAAIGYADADWARDLDSRRSVGAYVFL*SGAAVSWRSKMQDCTAASTCDAEYVAAAYAVQHALWLRRLARGLGLGVTAPTPIHEDNQPCSDIATNLFSERRVKHIDIKFHIVRERVESG 883
I +SQ Y +E+L++ +M PV TP PG EA + R L+G++ YL +T+PD+ V +R DPR W A +LRY++GT GL +++S R+ IGY+D+DW D+D R+S YVF +A +W SK Q A STC+AEYVAA+++VQHA+WLR L L + I DN+ ++A N + R KHID++FH +RE+V+ G
Sbjct: 111 IFVSQKRYAEEILSKAKMLNCNPVSTPMEPGTKLSKN-------GEAERVDASRYRSLIGSLRYLT-STRPDLMLSVGIASRFMEDPRYSHWKALKRILRYVKGTMSLGLCFTKSDNYRL------IGYSDSDWCGDVDDRKSTAGYVFFMGNSAFTWLSKKQPIVALSTCEAEYVAASWSVQHAVWLRNLLSKLEIMKAEKVLIRVDNRSAIELAKNPINHERSKHIDVRFHFIREKVKEG 338
BLAST of mRNA_P-wetherbeei_contig14530.1.1 vs. uniprot
Match: A0A7D9I9A7_PARCT (Uncharacterized protein n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9I9A7_PARCT) HSP 1 Score: 157 bits (398), Expect = 5.260e-43 Identity = 95/242 (39.26%), Postives = 134/242 (55.37%), Query Frame = 2
Query: 155 TIHLSQPHYIDELLARFRMSAAWPVQTPTCPGAPPRSTFRAPATAAEAAEMAGKPLRELVGAVLYLAVTTQPDIFDQVRALTRCCHDPRRPDWLAALWLLRYLEGTREKGLLYSRSTAARVPTPGAAIGYADADWARDLDSRRSVGAYVFL*SGAAVSWRSKMQDCTAASTCDAEYVAAAYAVQHALWLRRLARGLGLGVTAPTPIHEDNQPCSDIATNLFSERRVKHIDIKFHIVRERVES 880
T+ +SQ Y++ ++ RF M PV TP G TF+ A E + ++ +G + Y++ +T+PDI V L++ +P + WL LLRY++GT GL + + GYADA+WA D+D+RRS+ Y+F + A +SW SK Q A ST +AE+VA + A Q A+WLRRL GLG PT I EDNQ +IA N R KHIDI F+ +RER+ES
Sbjct: 11 TLFISQEKYLEGVINRFGMQDCNPVSTPLETG----KTFQKRADDEEPCNK--ETYQQAIGCLTYVSTSTRPDIAAAVGLLSQYMSNPSKDHWLGIKRLLRYIKGTLTYGLKFVANK-----NECDLHGYADANWAGDVDTRRSISGYIFKVADATISWSSKKQSTVAKSTTEAEFVALSQACQGAVWLRRLLSGLGCNTDGPTLIKEDNQGAIEIAKNPKFHNRTKHIDITFYFIRERIES 241 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14530.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14530.1.1 >prot_P-wetherbeei_contig14530.1.1 ID=prot_P-wetherbeei_contig14530.1.1|Name=mRNA_P-wetherbeei_contig14530.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=134bp MSAAWPVQTPTCPGAPPRSTFRAPATAAEAAEMAGKPLRELVGAVLYLAVback to top mRNA from alignment at P-wetherbeei_contig14530:818..1700+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14530.1.1 ID=mRNA_P-wetherbeei_contig14530.1.1|Name=mRNA_P-wetherbeei_contig14530.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=883bp|location=Sequence derived from alignment at P-wetherbeei_contig14530:818..1700+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14530:818..1700+ >mRNA_P-wetherbeei_contig14530.1.1 ID=mRNA_P-wetherbeei_contig14530.1.1|Name=mRNA_P-wetherbeei_contig14530.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=402bp|location=Sequence derived from alignment at P-wetherbeei_contig14530:818..1700+ (Phaeothamnion wetherbeei SAG_119_79)back to top |