mRNA_P-wetherbeei_contig14498.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14498.1.1
Unique NamemRNA_P-wetherbeei_contig14498.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14498.1.1 vs. uniprot
Match: F1A2H8_DICPU (HTTM domain-containing protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F1A2H8_DICPU)

HSP 1 Score: 120 bits (300), Expect = 6.220e-27
Identity = 91/286 (31.82%), Postives = 144/286 (50.35%), Query Frame = 1
Query:    4 DLRSLALLRVSAPLVYLIELLLNWQYIGAYLTDQGLLTRTTL---FQGTAGWSVYLAVGTIVGAKFLYICHMLALVSLILGFATPWSSLACYIFTYSLQHRFPALP-GWETEIRMLFLIGCFLPWGEFASLDSYRNKGPI----SNYLVVSPATIAWRTQIVILYLFSGLLKSGSGW-ADGTAVEGSLASDAYSNPAGLWFLSHCQHYPGLLETFSFAVPLVEIFCPLLLLSPWPALQI--LTVIILWTLHAGFGLFLHIGMFSPICCVCLLAFVPSSIWDSWHKR 828
            D RSLAL RV   +V L +L+  W  I A+ +D+G++ R+ +   F   + +S +L  G++ G +FL++ ++L    L++G+ +       Y F  SLQ R   +  G +  +R++   G  LP G   S+DS   K  +      + +V+ AT A   QI+ LY FS + K+G  W  D TA   +L  D +      + + +   +P LL   +F V   E F  +LL  P+   QI  L  +    LH GFG F+ +G+FSPIC    L   P+ +WD+   R
Sbjct:   25 DKRSLALFRVCVGIVGLYDLIERWVDIKAHYSDEGIVPRSMVTDNFWNKSWYSFHLMTGSVEGIQFLFLINILICFLLLVGYRSRLMMFLHYTFVLSLQARNNIVGHGGDVYMRVISFFGMLLPIGSVFSIDSAFKKPVLRRENKKFAIVNFATFAIILQIIFLYSFSYVHKTGDEWRVDYTASYYALQLDYFRT----FLVDYIIEFPSLLTAMTFGVLYYEGFGFVLLFIPFFTAQIRSLGALGFTMLHIGFGAFMRLGIFSPICASGTLLLYPTWLWDNIFNR 306          
BLAST of mRNA_P-wetherbeei_contig14498.1.1 vs. uniprot
Match: A0A2E6DI23_9DELT (HTTM domain-containing protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A2E6DI23_9DELT)

HSP 1 Score: 119 bits (297), Expect = 6.560e-27
Identity = 89/281 (31.67%), Postives = 142/281 (50.53%), Query Frame = 1
Query:    4 DLRSLALLRVSAPLVYLIELLLNWQYIGAYLTDQGLLTRTTLFQGTA-GW--SVYLAVGTIVGAKFLYICHMLALVSLILGFATPWSSLACYIFTYSLQHRFPALPGWETEI-RMLFLIGCFLPWGEFASLDSYRNKGPISNYLVVSPATIAWRTQIVILYLFSGLLKSGSGWADGTAVEGSLASDAYSNPAGLWFLSHCQHYPGLLETFSFAVPLVEIFCPLLLLSP-WPAL-QILTVIILWTLHAGFGLFLHIGMFSPICCVCLLAFVPSSIWDSWHKR 828
            DLRSLAL R+    + LI+L++    + A+ TD G++ R  L    A  W  S++   G I    FL+I H L  + LI G  +  ++   +    SLQ R P +      I RM      FLP G   SLD++ N        V S A+IA   Q++ +Y+F+ + ++G  W DG+A+  +   D   +  GL      + +P +L+  ++   LVE+  P+LLL P W    ++L +++LW LH G   F+ +G F  I    L  F+P+S W+ W ++
Sbjct:   13 DLRSLALWRIGLGSLLLIDLIIRGLDLAAHYTDMGVIPRAFLIGRQAHSWFLSLHFMSGRIEFQAFLFILHGLFALCLIFGLRSRLAAFLSWCLLVSLQVRNPEVQDASDHIIRMGLFFAMFLPIGARYSLDAHFNPPKEHKESVFSVASIAITLQVLFIYVFAIVTRTGPQWWDGSALYMAFHLDQLISSTGLML----RQFPEVLKIGTYGTMLVEVLGPILLLMPVWQTYTRMLALMLLWGLHLGIATFMALGTFPYISIAILFIFIPASWWE-WLQQ 288          
BLAST of mRNA_P-wetherbeei_contig14498.1.1 vs. uniprot
Match: F4PQ30_CAVFA (HTTM domain-containing protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PQ30_CAVFA)

HSP 1 Score: 115 bits (288), Expect = 2.380e-25
Identity = 90/286 (31.47%), Postives = 146/286 (51.05%), Query Frame = 1
Query:    4 DLRSLALLRVSAPLVYLIELLLNWQYIGAYLTDQGLLTRTTL---FQGTAGWSVYLAVGTIVGAKFLYICHMLALVSLILGFATPWSSLACYIFTYSLQHRFPALP-GWETEIRMLFLIGCFLPWGEFASLDSYRNKGPI----SNYLVVSPATIAWRTQIVILYLFSGLLKSGSGWA-DGTAVEGSLASDAYSNPAGLWFLSHCQHYPGLLETFSFAVPLVEIFCPLLLLSP-WPA-LQILTVIILWTLHAGFGLFLHIGMFSPICCVCLLAFVPSSIWDSWHKR 828
            D R+LA+ R     + ++++L  W  I A+ +D+G L R  +   +  T  +S +L  G +   +FL++ +++   S+++G+ +  S    YIF  SLQ R   +  G +  +R++     FLP G   S+DS   +  +      Y + + A+ A   QI  LY+FS + K+G  W  D TA   +L  D +   A  + L+    +P LL+  +  V   E F  LL LSP W A L+I+  +  + LH GFGLF+ +G+FSPIC    L   P+ +WD    R
Sbjct:   24 DKRALAVFRFFVGFIGMVDILERWPDIKAHYSDEGFLPRAVVADNYWNTNWFSFHLMSGAVPFMQFLFLVNIVICFSVMIGYRSRLSMFLHYIFVLSLQARNNIVGHGGDVYMRVISYFAFFLPIGSVWSIDSAFKRNVLRRETKKYNITNFASFAIILQIFFLYVFSYVHKTGDEWRKDYTATYFALQLDYFRTFAAEFALN----FPVLLKFMTVGVLYYEGFGILLCLSPVWTAPLKIIGALGFFMLHVGFGLFMRLGIFSPICATGSLLLFPTYLWDKIMDR 305          
BLAST of mRNA_P-wetherbeei_contig14498.1.1 vs. uniprot
Match: A0A7C3NQV6_9DELT (DUF393 domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C3NQV6_9DELT)

HSP 1 Score: 115 bits (287), Expect = 2.470e-25
Identity = 87/278 (31.29%), Postives = 144/278 (51.80%), Query Frame = 1
Query:    4 DLRSLALLRVSAPLVYLIELLLNWQYIGAYLTDQGLLTRTTLFQGTAGWSVYL--AVGTIVGAKFLYICHMLALVSLILGFATPWSSLACYIFTYSLQHRFPALPGWETEI--RMLFLIGCFLPWGEFASLDSYRNKGPISNYLVVSPATIAWRTQIVILYLFSGLLKSGSGW-ADGTAVEGSLASDAYSNPAGLWFLSHCQHYPGLLETFSFAVPLVEIFCPLLLLSP----WPALQILTVIILWTLHAGFGLFLHIGMFSPICCVCLLAFVPSSIW 810
            DLRS+A LRV+   + L++L      + A+ TDQG+  RT +   T+ WSV L    G       L++   LA ++L++G+ T ++S+  +    SL  R P + G+  ++  RM+   G F+PWG   S+D+  N  P      +S  TIA+  QIV +YLFS +LKSG  W ++G+A+  +L+ D  + P G   L    +    L+  ++ V ++E+  P+ L+ P    W  L  +  I++  LH      L +G+F  +    +L F+P   W
Sbjct:   12 DLRSMAALRVACASIVLLDLAQRASDLSAHYTDQGIAPRTLVIDHTSRWSVSLHQMSGIWEWQAVLFLLSALAALALLVGYRTRFASILTWGLCVSLITRNPYV-GYSADVLLRMMLFWGMFIPWGAVYSMDAVWNSDPPPARPFISLGTIAYVIQIVSVYLFSVVLKSGKEWWSEGSAIYYALSIDYLATPIGK-VLRDAPYVA--LKLLNWTVLILEVIAPIALILPVRRVWFRLAAILGIVI--LHVSISSVLFVGIFPLLGVAGMLFFLPGEFW 283          
BLAST of mRNA_P-wetherbeei_contig14498.1.1 vs. uniprot
Match: A0A848U8F4_9GAMM (DUF393 domain-containing protein n=1 Tax=Granulosicoccus sp. TaxID=1943584 RepID=A0A848U8F4_9GAMM)

HSP 1 Score: 114 bits (285), Expect = 4.940e-25
Identity = 87/286 (30.42%), Postives = 143/286 (50.00%), Query Frame = 1
Query:    4 DLRSLALLRVSAPLVYLIELLLNWQYIGAYLTDQGLLTRTTLFQGTAGW--SVYLAVGTIVGAKFLYICHMLALVSLILGFATPWSSLACYIFTYSLQHRFPAL-PGWETEIRMLFLIGCFLPWGEFASLDSYRNKGPISNYLVV-----------SPATIAWRTQIVILYLFSGLLKSGSGWADG-TAVEGSLASDAYSNPAGLWFLSHCQHYPGLLETFSFAVPLVEIFCPLLLLSP--WPALQILTVIILWTLHAGFGLFLHIGMFSPICCVCLLAFVPSSIW 810
            DLRS+AL R+   L+ L +LLL    +  + TD G+L R    + T GW  S++ A G +     L++   +A  +L+ G+ +  ++LA +I   SL +R   L  G +  + ++     FLP G   S DS        N   +           S ATIA   Q++ LY+F+ ++K+G  W     A   +++   ++ P G W     + +PGLL+  +  V  VE   P L+L P  WP +++  +++L +LHA F L LHIG+F  I  + L   +P ++W
Sbjct:   11 DLRSIALFRILLALLLLTDLLLRSVDMSTFYTDAGVLPRLQWLELTHGWHWSIHAASGELWWQALLFLMAGIAATALLFGYRSKLAALASFILLTSLMNRNGLLLQGGDNLLVVMSFWALFLPLGARWSFDSALQPVLADNPNALPSTANREQPYFSVATIAIVFQVLYLYVFTAMMKTGDAWVTRFDAAYYAVSLQHFATPVGDWI----RQFPGLLKLATVYVLSVEFVAPFLVLCPFMWPWVRVSGLLLLASLHAAFLLMLHIGLFPLIDFMALSLLIPGAVW 292          
BLAST of mRNA_P-wetherbeei_contig14498.1.1 vs. uniprot
Match: UPI000484F429 (HTTM domain-containing protein n=1 Tax=Solimonas soli TaxID=413479 RepID=UPI000484F429)

HSP 1 Score: 111 bits (277), Expect = 5.890e-24
Identity = 90/284 (31.69%), Postives = 140/284 (49.30%), Query Frame = 1
Query:    4 DLRSLALLRVSAPLVYLIELLLNWQYIGAYLTDQGLLTRTTLFQGTAGW--SVYLAVGT--IVGAKFLYICHMLALVSLILGFATPWSSLACYIFTYSLQHRFPA-LPGWETEIRMLFLIGCFLPWGEFASLDS-YRNKGPISNYLVVSPATIAWRTQIVILYLFSGLLKSG-SGWADGTAVEGSLASDAYSNPAGLWFLSHCQHYPGLLETFSFAVPLVEIFCPLLLLSPWPALQILTVIIL--WTLHAGFGLFLHIGMFSPICCVCLLAFVPSSIWDSWHKR 828
            DLR+LAL RV+  LV L   L  ++ + A+ TD G+L RT + +  + W  S+YL  G    VGA  L +      +   LG+   W+++  ++   S  +R P  L G +  +  L     FLP     S+D+      P  N L VS AT+    Q++ +Y FS +LKSG   W D +AV  +L  D ++ P G W L     +P L++  S  V  +E+  P+L+ +PW    +   ++L    +H GF L L +G F  +    L AF    +WD+  +R
Sbjct:   22 DLRTLALFRVALGLVLLWCSLSAFRDLAAFWTDAGVLPRTAMIESDSQWRLSLYLVNGQSWFVGA--LLLVQSACALMFALGWRMRWAAVLSFVLWASFINRNPVVLIGGDLLLCCLLFWSMFLPLAARYSVDAALATNPPPENDLHVSWATLGLLLQVMSVYFFSAILKSGREWWPDFSAVYYALMLDRHALPLGHWLLK----FPALMKLLSIYVYFLELLGPILIFTPWLLRPVRFALMLAFMLMHVGFLLCLQLGHFPFVSIASLTAFAGGWLWDAAARR 299          
BLAST of mRNA_P-wetherbeei_contig14498.1.1 vs. uniprot
Match: A0A8J7QEU8_9BACT (HTTM domain-containing protein n=1 Tax=Acanthopleuribacter pedis TaxID=442870 RepID=A0A8J7QEU8_9BACT)

HSP 1 Score: 109 bits (273), Expect = 2.010e-23
Identity = 87/286 (30.42%), Postives = 131/286 (45.80%), Query Frame = 1
Query:    4 DLRSLALLRVSAPLVYLIELLLNWQYIGAYLTDQGLLTRTTLFQGTAGWSVY-----LAVGTIVGAKFLYICHMLALVSLILGFATPWSSLACYIFTYSLQHRFP-ALPGWETEIRMLFLIGCFLPWGEFASLDSYRNKGPISNY---LVVSPATIAWRTQIVILYLFSGLLKSGSGWADGTAVEGSLASDAYSNPAGLWFLSHCQHYPGLLETFSFAVPLVEIFCPLLLLSPWPALQ--ILTVIILWTLHAGFGLFLHIGMFSPICCVCLLAFVPSSIWDSWHKR 828
            D RSLAL RV+   + L++L +    I  + T++G+L    L        V+       + T     F +    L  V L++G+ + W + A +    SL +R P  L   +T +RML     FLP G   S+D  R   P        VV+P T     Q+  LY F+G+LK G+ W +GTA+  +L  DA++ P G W L    H    L T       +E+F P L   P    Q  +L + +  +LH G  L + +G+FS I     L ++P+  WD    R
Sbjct:   30 DTRSLALFRVAVATIILVDLWVRCGDITMFYTNEGVLPTDLLVSKYNSTKVFWYNPHFYINTFAWQAFWFCVAALLAVMLLVGYRSRWVAFASWFLLLSLHNRNPMVLQSGDTLLRMLVFWAMFLPIGAHFSVD--RALDPTEKEPPRAVVNPLTAGLLLQMFCLYFFTGILKKGATWENGTALYYALNIDAWTRPFGSWMLQF--HEMNALATHGTLY--LELFGPFLPFLPLFTAQFRMLAITVFCSLHIGIALTMDVGLFSYISMAGWLPYLPTKFWDFLGAR 309          
BLAST of mRNA_P-wetherbeei_contig14498.1.1 vs. uniprot
Match: A0A534V723_9DELT (DUF393 domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534V723_9DELT)

HSP 1 Score: 108 bits (269), Expect = 6.090e-23
Identity = 85/262 (32.44%), Postives = 132/262 (50.38%), Query Frame = 1
Query:   52 LIELLLNWQYIGAYLTDQGLLTRTTLFQGTAGW--SVYLAVGTIVGAKFLYICHMLALVSLILGFATPWSSLACYIFTYSLQHRFPA-LPGWETEIRMLFLIGCFLPWGEFASLDSYRNKGPISNYLV---VSPATIAWRTQIVILYLFSGLLKSGSGWADGTAVEGSLASDAYSNPAGLWFLSHCQHYPGLLETFSFAVPLVEIFCPLLLLSP--WPALQILTVIILWTLHAGFGLFLHIGMFSPICCVCLLAFVPSSIWD 813
            +I+L+   + + A+ TD G+L R  L Q  + W  S++LA GT      L+       ++L+LG+ T  +++  +    SL  R P  L G +  +R++   G FLPWG   S+D  R  GP    L    +S AT A+  QIV +Y FS L K+G  W +GTAV  +L  D    P G + L     +P LL+  + +V   E   PL L SP  +  ++   ++  + LH G G+  ++G+F+      LL  +PS  WD
Sbjct:    6 IIDLIRRCRDLVAHYTDFGVLPRAALLQDFSRWRISLHLANGTWEFQALLFGIAGACALALMLGYKTHIATVGSWFLLASLHSRNPLILDGGDVLLRLMLFWGIFLPWGACWSVD--RALGPPDIKLPERKLSAATFAYVAQIVFVYWFSVLHKTGPEWHEGTAVYYTLQFDQVVTPFGQYLLQ----FPSLLKLLTHSVVWFERIGPLFLFSPILFGPVRTAAILSFFLLHIGIGICTNVGIFTWAAPFSLLGLLPSWFWD 261          
BLAST of mRNA_P-wetherbeei_contig14498.1.1 vs. uniprot
Match: UPI00041CD3EE (DCC1-like thiol-disulfide oxidoreductase family protein n=2 Tax=Solimonas TaxID=413435 RepID=UPI00041CD3EE)

HSP 1 Score: 107 bits (268), Expect = 9.370e-23
Identity = 89/283 (31.45%), Postives = 141/283 (49.82%), Query Frame = 1
Query:    4 DLRSLALLRVSAPLVYLIELLLNWQYIGAYLTDQGLLTRTTLFQGTAGW--SVYLAVGTIVGAKFLYICHMLALVSLILGFATPWSSLACYIFTYSLQHRFPA-LPGWETEIRMLFLIGCFLPWGEFASLDSY--RNKGPISNYLVVSPATIAWRTQIVILYLFSGLLKSG-SGWADGTAVEGSLASDAYSNPAGLWFLSHCQHYPGLLETFSFAVPLVEIFCPLLLLSPW--PALQILTVIILWTLHAGFGLFLHIGMFSPICCVCLLAFVPSSIWDSWHKR 828
            DLR+LAL RV   LV L  +L +++ + A+ TD G++ R  L +  + W  S+YLA G    A  L +      +   LG+ T  + +  ++   S  +R P  L G +  +  L     FLP     S+D+    N  P  N L VS A++    Q++ +Y FS +LKSG   W D TAV  +L  D ++ P G W L+    +PGL++  S  V  +E+  P+L+ +P+    ++   ++   T+H GF L L IG F  +    L  F    +WD+  +R
Sbjct:   22 DLRTLALFRVVLGLVLLWCVLSSFRDLTAFWTDAGVMPRAWLIETDSLWRLSLYLANGQAWFAGLLLLIQAACALLFALGWRTRVAGILSFVLWASFINRNPVVLIGGDLLLCCLLFWSMFLPLAARYSVDAALSTNPPPAQN-LHVSWASLGLLMQVMSVYFFSAILKSGREWWPDFTAVYYALMLDRHALPLGHWLLN----FPGLMKLLSVYVYFLELLGPILIFTPYFLRPVRFALMLAFMTMHVGFLLCLQIGHFPFVSLASLTTFTGGWVWDALARR 299          
BLAST of mRNA_P-wetherbeei_contig14498.1.1 vs. uniprot
Match: A0A8J4V4V6_9MYCE (BSD domain-containing protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4V4V6_9MYCE)

HSP 1 Score: 106 bits (264), Expect = 3.500e-22
Identity = 84/281 (29.89%), Postives = 138/281 (49.11%), Query Frame = 1
Query:    4 DLRSLALLRVSAPLVYLIELLLNWQYIGAYLTDQGLLTRTTL---FQGTAGWSVYLAVGTIVGAKFLYICHMLALVSLILGFATPWSSLACYIFTYSLQHRFPALP-GWETEIRMLFLIGCFLPWGEFASLDSYRNKGPI----SNYLVVSPATIAWRTQIVILYLFSGLLKSGSGWA-DGTAVEGSLASDAYSNPAGLWFLSHCQHYPGLLETFSFAVPLVEIFCPLLLLSP--WPALQILTVIILWTLHAGFGLFLHIGMFSPICCVCLLAFVPSSIWD 813
            D RSLA+ RV   L+ + ++   W  I A+ +D+GL+ R+ +   F     +S++L  G+++  + ++I +M+    L++G+ +       Y+F  S+Q R   +  G +  +R++     FLP G   S+DS   K  +        +V+  T A   QI+ LY+FS + K+G  W  D TA   +L  D +      W L+    +P LL+  + AV   E F  L L SP     ++    +    LH GF  F+ +G+FSPIC    L   PS +WD
Sbjct:   22 DKRSLAIFRVLVGLIGIYDMFERWPDIKAHYSDEGLIPRSMVTDNFWNKQWFSIHLISGSVLCIQLIFIVNMVVCFLLMIGYRSRLMMFFNYLFILSIQSRNNIVGHGGDVYMRVICYFTMFLPLGSVFSIDSAFKKPVLRRENKKLSLVNFCTFAVILQIIFLYVFSYVHKTGDEWRKDYTASFFALNLDYFRTFLADWILN----FPTLLQIMTVAVLYYEGFGFLFLFSPVLTAPVKAFGAVGFTALHIGFAAFMRLGIFSPICATGTLLLYPSWLWD 298          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14498.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
F1A2H8_DICPU6.220e-2731.82HTTM domain-containing protein n=1 Tax=Dictyosteli... [more]
A0A2E6DI23_9DELT6.560e-2731.67HTTM domain-containing protein n=1 Tax=Myxococcale... [more]
F4PQ30_CAVFA2.380e-2531.47HTTM domain-containing protein n=1 Tax=Cavenderia ... [more]
A0A7C3NQV6_9DELT2.470e-2531.29DUF393 domain-containing protein n=1 Tax=Deltaprot... [more]
A0A848U8F4_9GAMM4.940e-2530.42DUF393 domain-containing protein n=1 Tax=Granulosi... [more]
UPI000484F4295.890e-2431.69HTTM domain-containing protein n=1 Tax=Solimonas s... [more]
A0A8J7QEU8_9BACT2.010e-2330.42HTTM domain-containing protein n=1 Tax=Acanthopleu... [more]
A0A534V723_9DELT6.090e-2332.44DUF393 domain-containing protein n=1 Tax=Deltaprot... [more]
UPI00041CD3EE9.370e-2331.45DCC1-like thiol-disulfide oxidoreductase family pr... [more]
A0A8J4V4V6_9MYCE3.500e-2229.89BSD domain-containing protein n=1 Tax=Polysphondyl... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14498contigP-wetherbeei_contig14498:813..1640 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1403819.BATR01000164_gene5586
PFAMsDUF393
Model size828
Max annot lvl2|Bacteria
Hectar predicted targeting categorysignal peptide
Exons1
Evalue9.82e-32
EggNOG OGsCOG3011@1|root,COG3011@2|Bacteria
DescriptionProtein conserved in bacteria
Cds size828
COG categoryCH
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186023.7553992-CDS-P-wetherbeei_contig14498:812..16401683186023.7553992-CDS-P-wetherbeei_contig14498:812..1640Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14498 813..1640 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14498.1.1prot_P-wetherbeei_contig14498.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14498 813..1640 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14498.1.1

>prot_P-wetherbeei_contig14498.1.1 ID=prot_P-wetherbeei_contig14498.1.1|Name=mRNA_P-wetherbeei_contig14498.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=276bp
FDLRSLALLRVSAPLVYLIELLLNWQYIGAYLTDQGLLTRTTLFQGTAGW
SVYLAVGTIVGAKFLYICHMLALVSLILGFATPWSSLACYIFTYSLQHRF
PALPGWETEIRMLFLIGCFLPWGEFASLDSYRNKGPISNYLVVSPATIAW
RTQIVILYLFSGLLKSGSGWADGTAVEGSLASDAYSNPAGLWFLSHCQHY
PGLLETFSFAVPLVEIFCPLLLLSPWPALQILTVIILWTLHAGFGLFLHI
GMFSPICCVCLLAFVPSSIWDSWHKR
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mRNA from alignment at P-wetherbeei_contig14498:813..1640+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14498.1.1 ID=mRNA_P-wetherbeei_contig14498.1.1|Name=mRNA_P-wetherbeei_contig14498.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=828bp|location=Sequence derived from alignment at P-wetherbeei_contig14498:813..1640+ (Phaeothamnion wetherbeei SAG_119_79)
TTTGATCTTCGTAGCCTCGCACTGCTCCGTGTATCTGCTCCGCTCGTTTA CCTGATTGAATTATTGCTCAACTGGCAATACATTGGTGCCTACTTAACTG ATCAGGGGCTCCTAACTCGCACTACGCTATTCCAGGGGACCGCAGGATGG TCGGTTTATTTAGCCGTTGGCACTATAGTAGGAGCAAAATTCCTGTATAT CTGCCATATGCTAGCGCTTGTCTCATTAATTTTGGGTTTTGCGACGCCGT GGTCCTCATTAGCCTGTTACATTTTCACATACTCACTTCAGCATCGCTTC CCCGCACTACCGGGATGGGAGACTGAGATTCGGATGCTCTTTCTCATCGG CTGTTTTTTGCCTTGGGGTGAATTCGCTTCCCTTGACAGTTACAGGAACA AGGGGCCTATCTCGAACTATCTAGTAGTGTCACCGGCCACGATCGCCTGG CGAACTCAAATAGTGATCCTCTATCTTTTTTCAGGATTACTCAAATCGGG CAGCGGGTGGGCCGACGGGACGGCGGTCGAGGGTTCATTGGCGAGCGACG CCTACAGTAATCCTGCCGGCCTCTGGTTTCTTTCCCACTGCCAGCACTAT CCGGGACTTTTGGAAACCTTTAGTTTTGCCGTACCGCTCGTGGAGATATT CTGCCCTTTATTGCTCCTCAGTCCTTGGCCCGCCTTGCAAATACTCACAG TCATTATATTGTGGACTCTGCACGCAGGCTTCGGATTATTTTTGCATATA GGCATGTTCAGTCCGATTTGCTGTGTTTGCCTACTAGCTTTCGTGCCTTC AAGCATCTGGGATTCTTGGCACAAGCGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14498:813..1640+

>mRNA_P-wetherbeei_contig14498.1.1 ID=mRNA_P-wetherbeei_contig14498.1.1|Name=mRNA_P-wetherbeei_contig14498.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=828bp|location=Sequence derived from alignment at P-wetherbeei_contig14498:813..1640+ (Phaeothamnion wetherbeei SAG_119_79)
TTTGATCTTCGTAGCCTCGCACTGCTCCGTGTATCTGCTCCGCTCGTTTA
CCTGATTGAATTATTGCTCAACTGGCAATACATTGGTGCCTACTTAACTG
ATCAGGGGCTCCTAACTCGCACTACGCTATTCCAGGGGACCGCAGGATGG
TCGGTTTATTTAGCCGTTGGCACTATAGTAGGAGCAAAATTCCTGTATAT
CTGCCATATGCTAGCGCTTGTCTCATTAATTTTGGGTTTTGCGACGCCGT
GGTCCTCATTAGCCTGTTACATTTTCACATACTCACTTCAGCATCGCTTC
CCCGCACTACCGGGATGGGAGACTGAGATTCGGATGCTCTTTCTCATCGG
CTGTTTTTTGCCTTGGGGTGAATTCGCTTCCCTTGACAGTTACAGGAACA
AGGGGCCTATCTCGAACTATCTAGTAGTGTCACCGGCCACGATCGCCTGG
CGAACTCAAATAGTGATCCTCTATCTTTTTTCAGGATTACTCAAATCGGG
CAGCGGGTGGGCCGACGGGACGGCGGTCGAGGGTTCATTGGCGAGCGACG
CCTACAGTAATCCTGCCGGCCTCTGGTTTCTTTCCCACTGCCAGCACTAT
CCGGGACTTTTGGAAACCTTTAGTTTTGCCGTACCGCTCGTGGAGATATT
CTGCCCTTTATTGCTCCTCAGTCCTTGGCCCGCCTTGCAAATACTCACAG
TCATTATATTGTGGACTCTGCACGCAGGCTTCGGATTATTTTTGCATATA
GGCATGTTCAGTCCGATTTGCTGTGTTTGCCTACTAGCTTTCGTGCCTTC
AAGCATCTGGGATTCTTGGCACAAGCGC
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