mRNA_P-wetherbeei_contig14488.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14488.1.1 vs. uniprot
Match: A0A6A7M659_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A6A7M659_9PROT) HSP 1 Score: 109 bits (273), Expect = 8.020e-27 Identity = 53/79 (67.09%), Postives = 70/79 (88.61%), Query Frame = 1
Query: 7 ILVFVSDPGEKIVSDLAVLSELFGFPPAEGRLVLALLSGATAPEFAQMVGVTYNTVRTLLSRAMARTGSRSQVELVLLV 243
+L+F+SDP +++VSDLA+L ELFGFPP+E RLVLALL+G P+FA+ VG++YNT+RTLL RAM RTG+RSQVELVL++
Sbjct: 292 VLLFISDPTQQLVSDLAILKELFGFPPSEARLVLALLNGIAPPDFAREVGLSYNTIRTLLVRAMDRTGTRSQVELVLVM 370
BLAST of mRNA_P-wetherbeei_contig14488.1.1 vs. uniprot
Match: A0A512NS25_9HYPH (Helix-turn-helix transcriptional regulator n=1 Tax=Reyranella soli TaxID=1230389 RepID=A0A512NS25_9HYPH) HSP 1 Score: 103 bits (257), Expect = 1.540e-24 Identity = 54/79 (68.35%), Postives = 65/79 (82.28%), Query Frame = 1
Query: 7 ILVFVSDPGEKIVSDLAVLSELFGFPPAEGRLVLALLSGATAPEFAQMVGVTYNTVRTLLSRAMARTGSRSQVELVLLV 243
+LVFVSDP K+ +DL+VL+ LFGFPPAE RLVLAL++G PE A GVTYNT+RT L+RAMART +RSQ+ELVLLV
Sbjct: 288 VLVFVSDPAAKMAADLSVLAGLFGFPPAEARLVLALMAGKQLPEIAIDTGVTYNTIRTQLARAMARTETRSQLELVLLV 366
BLAST of mRNA_P-wetherbeei_contig14488.1.1 vs. uniprot
Match: A0A5C5TDN7_9HYPH (HTH luxR-type domain-containing protein n=1 Tax=Reyranella sp. CPCC 100927 TaxID=2599616 RepID=A0A5C5TDN7_9HYPH) HSP 1 Score: 82.8 bits (203), Expect = 7.690e-17 Identity = 43/79 (54.43%), Postives = 55/79 (69.62%), Query Frame = 1
Query: 7 ILVFVSDPGEKIVSDLAVLSELFGFPPAEGRLVLALLSGATAPEFAQMVGVTYNTVRTLLSRAMARTGSRSQVELVLLV 243
+LVF++DP D L +LF F PAE RLVLAL+SG P F+ G++YNTVRTLL+RAM RT + SQ++LV LV
Sbjct: 292 VLVFIADPDATPAIDPVALEQLFDFTPAEARLVLALVSGVPLPAFSHQTGLSYNTVRTLLARAMTRTETNSQLQLVRLV 370
BLAST of mRNA_P-wetherbeei_contig14488.1.1 vs. uniprot
Match: A0A259MD66_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillales bacterium 39-66-50 TaxID=1970570 RepID=A0A259MD66_9PROT) HSP 1 Score: 82.0 bits (201), Expect = 1.390e-16 Identity = 42/78 (53.85%), Postives = 56/78 (71.79%), Query Frame = 1
Query: 10 LVFVSDPGEKIVSDLAVLSELFGFPPAEGRLVLALLSGATAPEFAQMVGVTYNTVRTLLSRAMARTGSRSQVELVLLV 243
LVFV+DP E + L +LFGFP AE L LL+G + P++A+ ++YNT RTLL+RAMART +RSQ+ELVLL+
Sbjct: 293 LVFVADPAEGNAVGIGALRDLFGFPRAEAELAAGLLNGISLPDYARRSRISYNTARTLLARAMARTSTRSQLELVLLL 370
BLAST of mRNA_P-wetherbeei_contig14488.1.1 vs. uniprot
Match: A0A5C8PSZ2_9HYPH (Helix-turn-helix transcriptional regulator n=1 Tax=Vineibacter terrae TaxID=2586908 RepID=A0A5C8PSZ2_9HYPH) HSP 1 Score: 82.0 bits (201), Expect = 1.460e-16 Identity = 43/75 (57.33%), Postives = 54/75 (72.00%), Query Frame = 1
Query: 7 ILVFVSDPGEKIVSDLAVLSELFGFPPAEGRLVLALLSGATAPEFAQMVGVTYNTVRTLLSRAMARTGSRSQVEL 231
+LVF++DP + +D A L LF PAE RLVLAL +G T P FA G++YNTVRTLL+RAMART + SQ+EL
Sbjct: 292 VLVFIADPQARPDTDPAALMALFDLTPAEARLVLALANGVTLPAFASQAGLSYNTVRTLLARAMARTQTSSQLEL 366
BLAST of mRNA_P-wetherbeei_contig14488.1.1 vs. uniprot
Match: A0A512NS06_9HYPH (Transcriptional regulator n=2 Tax=Reyranella soli TaxID=1230389 RepID=A0A512NS06_9HYPH) HSP 1 Score: 64.7 bits (156), Expect = 2.330e-10 Identity = 34/75 (45.33%), Postives = 49/75 (65.33%), Query Frame = 1
Query: 10 LVFVSDPGEKIVSDLAVLSELFGFPPAEGRLVLALLSGATAPEFAQMVGVTYNTVRTLLSRAMARTGSRSQVELV 234
++ V+DP DL L LFGF PAE RLV L+SG + P+ A+ +G+ + T RT L+RA A+T + SQ++LV
Sbjct: 285 MLIVTDPDADPQLDLQALKALFGFTPAEARLVNLLVSGRSLPDVAKELGIGFETARTHLARARAKTETTSQIDLV 359
BLAST of mRNA_P-wetherbeei_contig14488.1.1 vs. uniprot
Match: A0A521QPL5_9HYPH (HTH luxR-type domain-containing protein n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521QPL5_9HYPH) HSP 1 Score: 62.4 bits (150), Expect = 1.560e-9 Identity = 34/79 (43.04%), Postives = 50/79 (63.29%), Query Frame = 1
Query: 7 ILVFVSDPGEKIVSDLAVLSELFGFPPAEGRLVLALLSGATAPEFAQMVGVTYNTVRTLLSRAMARTGSRSQVELVLLV 243
+++ ++DP + LS LFGF PAE RLV L +G + P A+ +GV++ T RT L+ A A+T + SQV+LV LV
Sbjct: 296 VMLIITDPETARTVEPRTLSALFGFTPAEARLVGLLTTGLSLPAIAKRLGVSFETARTQLASARAKTDTASQVDLVRLV 374
BLAST of mRNA_P-wetherbeei_contig14488.1.1 vs. uniprot
Match: UPI0005C284A4 (helix-turn-helix transcriptional regulator n=1 Tax=Reyranella massiliensis TaxID=445220 RepID=UPI0005C284A4) HSP 1 Score: 62.4 bits (150), Expect = 1.560e-9 Identity = 36/79 (45.57%), Postives = 50/79 (63.29%), Query Frame = 1
Query: 7 ILVFVSDPGEKIVSDLAVLSELFGFPPAEGRLVLALLSGATAPEFAQMVGVTYNTVRTLLSRAMARTGSRSQVELVLLV 243
+++ V+DP + VLS LFG PAE RLV L +G P A+ +GV++ TVRT L+ A A+T + SQV+LV LV
Sbjct: 296 VMLIVTDPEAAPRIEPRVLSTLFGLTPAEARLVSLLAAGLPLPAIAKRLGVSFETVRTQLATARAKTDTASQVDLVRLV 374
BLAST of mRNA_P-wetherbeei_contig14488.1.1 vs. uniprot
Match: A0A5C8PSR5_9HYPH (HTH luxR-type domain-containing protein n=1 Tax=Vineibacter terrae TaxID=2586908 RepID=A0A5C8PSR5_9HYPH) HSP 1 Score: 61.2 bits (147), Expect = 4.040e-9 Identity = 32/75 (42.67%), Postives = 45/75 (60.00%), Query Frame = 1
Query: 10 LVFVSDPGEKIVSDLAVLSELFGFPPAEGRLVLALLSGATAPEFAQMVGVTYNTVRTLLSRAMARTGSRSQVELV 234
+VF++DP + ++ L PAE R+V L SG P+ G +YNTVRTLL+RAM +T + SQV+LV
Sbjct: 293 VVFINDPDGVPGPEAGLVQALLDLTPAEARVVAMLASGVPLPQIGAATGTSYNTVRTLLARAMTKTQTTSQVDLV 367
BLAST of mRNA_P-wetherbeei_contig14488.1.1 vs. uniprot
Match: A0A2D6BN28_9DELT (HTH luxR-type domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2D6BN28_9DELT) HSP 1 Score: 58.2 bits (139), Expect = 4.110e-8 Identity = 33/77 (42.86%), Postives = 47/77 (61.04%), Query Frame = 1
Query: 13 VFVSDPGEKIVSDLAVLSELFGFPPAEGRLVLALLSGATAPEFAQMVGVTYNTVRTLLSRAMARTGSRSQVELVLLV 243
+F++DP L L+G PAE R V + GA+ A+++GVT++TVR L RA A+TG+RSQ +LV LV
Sbjct: 191 LFLADPERSGQCAPGELEALYGLTPAEARTVRCVARGASVARSAEILGVTHHTVRFNLKRAFAKTGARSQAQLVRLV 267 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14488.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14488.1.1 >prot_P-wetherbeei_contig14488.1.1 ID=prot_P-wetherbeei_contig14488.1.1|Name=mRNA_P-wetherbeei_contig14488.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=81bp SEILVFVSDPGEKIVSDLAVLSELFGFPPAEGRLVLALLSGATAPEFAQMback to top mRNA from alignment at P-wetherbeei_contig14488:212..454+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14488.1.1 ID=mRNA_P-wetherbeei_contig14488.1.1|Name=mRNA_P-wetherbeei_contig14488.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=243bp|location=Sequence derived from alignment at P-wetherbeei_contig14488:212..454+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14488:212..454+ >mRNA_P-wetherbeei_contig14488.1.1 ID=mRNA_P-wetherbeei_contig14488.1.1|Name=mRNA_P-wetherbeei_contig14488.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=243bp|location=Sequence derived from alignment at P-wetherbeei_contig14488:212..454+ (Phaeothamnion wetherbeei SAG_119_79)back to top |