mRNA_P-wetherbeei_contig14412.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14412.2.1 vs. uniprot
Match: UPI00142085C4 (acetoin utilization protein AcuC n=1 Tax=Pelagibius litoralis TaxID=374515 RepID=UPI00142085C4) HSP 1 Score: 256 bits (653), Expect = 7.590e-82 Identity = 124/174 (71.26%), Postives = 142/174 (81.61%), Query Frame = 1
Query: 16 PRFIGSEIYRRSRYGSNHPLAIPRVSTCIDLCRALGWLPDEVYIDSPTATPDELTRFHAPEYVAALQAAEAAQAIDDAASERFNIGRGGNPVFGEIFRRPATACGASLLAAEMLAGGEAHIIYSPAGGTHHGQRAAASGFCYLNDPVLAILRLLDRGVARVAYDNIDAHHSDGV 537
PRFIGSEIYRRS YG HPLAIPRVSTC+DLCRALGWLP+ YIDSP ATP +LTRFH P YVAA+Q AE Q + A ERFN+GR GNP++ E+FRRPATACGAS+LA E+LA E I++SPAGGTHHG+ ASGFCY NDPVL IL LLD+G+ARVAY ++DAHH DGV
Sbjct: 11 PRFIGSEIYRRSTYGGRHPLAIPRVSTCMDLCRALGWLPEAAYIDSPRATPAQLTRFHDPAYVAAVQKAEREQQLSVAEQERFNLGRNGNPIYPEVFRRPATACGASILAGELLA--EPGIVHSPAGGTHHGRAGRASGFCYFNDPVLGILTLLDQGIARVAYLDVDAHHGDGV 182
BLAST of mRNA_P-wetherbeei_contig14412.2.1 vs. uniprot
Match: A0A192IMC6_9HYPH (Acetoin utilization protein AcuC n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A192IMC6_9HYPH) HSP 1 Score: 241 bits (615), Expect = 2.760e-76 Identity = 123/179 (68.72%), Postives = 139/179 (77.65%), Query Frame = 1
Query: 4 MPHRPRFIGSEIYRRSRYGSNHPLAIPRVSTCIDLCRALGWLPDEVYIDSPTATPDELTRFHAPEYVAALQAAEAAQAIDDAASERFNIGRGGNPVFGEIFRRPATACGASLLAAEMLAGGEAHIIYSPAGGTHHGQRAAASGFCYLNDPVLAILRLLDRGVARVAYDNIDAHHSDGVD 540
M R FIGSEIYR SRYG HPLAIPRVST +DL RAL WLP++ Y+DSPTAT DEL RFH P YVAA+Q AE Q D ER+NIGR NPVFGE+FRRPATA GASLLAAE++AG A IY+PAGGTHHG+ ASGFC+ NDPVL ILRL DRGV R+AY ++DAHH DGV+
Sbjct: 1 MRARTYFIGSEIYRASRYGRRHPLAIPRVSTVMDLARALHWLPEDAYLDSPTATVDELCRFHDPAYVAAVQRAEREQRADAELRERYNIGRLENPVFGEVFRRPATAAGASLLAAELIAGDRADRIYTPAGGTHHGRPDRASGFCFFNDPVLCILRLKDRGVKRIAYVDLDAHHCDGVE 179
BLAST of mRNA_P-wetherbeei_contig14412.2.1 vs. uniprot
Match: A0A369TH61_9PROT (Acetoin utilization protein AcuC n=2 Tax=Ferruginivarius sediminum TaxID=2661937 RepID=A0A369TH61_9PROT) HSP 1 Score: 240 bits (613), Expect = 6.790e-76 Identity = 120/175 (68.57%), Postives = 134/175 (76.57%), Query Frame = 1
Query: 13 RPRFIGSEIYRRSRYGSNHPLAIPRVSTCIDLCRALGWLPDEVYIDSPTATPDELTRFHAPEYVAALQAAEAAQAIDDAASERFNIGRGGNPVFGEIFRRPATACGASLLAAEMLAGGEAHIIYSPAGGTHHGQRAAASGFCYLNDPVLAILRLLDRGVARVAYDNIDAHHSDGV 537
RPRFIGSEIYR S YG HPLAIPRVSTCIDLCRA+GWLPDEVY DSP ATP +L FH YVAA+QAAE QA+ D R +G GNPVF E+FRRPATA G S+LAA +L GG A +Y+PAGGTHHG+ ASGFCY NDPVLAIL LLD G+ RV Y ++DAHH DGV
Sbjct: 2 RPRFIGSEIYRHSSYGRKHPLAIPRVSTCIDLCRAMGWLPDEVYQDSPRATPAQLAHFHDSAYVAAVQAAEREQAVSDEVRARHGLGANGNPVFPEVFRRPATASGGSILAARLLLGG-AGTVYNPAGGTHHGRPDRASGFCYFNDPVLAILTLLDGGIGRVLYVDVDAHHGDGV 175
BLAST of mRNA_P-wetherbeei_contig14412.2.1 vs. uniprot
Match: A0A8J7N153_9PROT (Acetoin utilization protein AcuC (Fragment) n=1 Tax=Candidatus Odyssella sp. TaxID=2589116 RepID=A0A8J7N153_9PROT) HSP 1 Score: 237 bits (605), Expect = 6.480e-75 Identity = 113/176 (64.20%), Postives = 136/176 (77.27%), Query Frame = 1
Query: 13 RPRFIGSEIYRRSRYGSNHPLAIPRVSTCIDLCRALGWLPDEVYIDSPTATPDELTRFHAPEYVAALQAAEAAQAIDDAASERFNIGRGGNPVFGEIFRRPATACGASLLAAEMLAGGEAHIIYSPAGGTHHGQRAAASGFCYLNDPVLAILRLLDRGVARVAYDNIDAHHSDGVD 540
RPR I SEIYR SRYG HPLAIPRVS +DLCRALGWLP+ Y+D+P ATP++L RFH P+Y+AA+ E Q+ RF +G GNPVFGE++RRPATACGA+LLA ++L G I++SPAGGTHHG+RAAASGFCY NDPVL IL LDRG+ RVAY ++DAHH DGV+
Sbjct: 3 RPRLIASEIYRHSRYGGKHPLAIPRVSLAVDLCRALGWLPEGAYVDAPIATPEQLARFHDPDYIAAVADCERTQSATPEQRRRFGLGANGNPVFGEVYRRPATACGATLLAVDLLRDGG--IVHSPAGGTHHGRRAAASGFCYFNDPVLGILAFLDRGLTRVAYVDLDAHHCDGVE 176
BLAST of mRNA_P-wetherbeei_contig14412.2.1 vs. uniprot
Match: UPI000E6ADCD0 (acetoin utilization protein AcuC n=1 Tax=Indioceanicola profundi TaxID=2220096 RepID=UPI000E6ADCD0) HSP 1 Score: 238 bits (606), Expect = 1.060e-74 Identity = 117/179 (65.36%), Postives = 138/179 (77.09%), Query Frame = 1
Query: 1 PMPHRPRFIGSEIYRRSRYGSNHPLAIPRVSTCIDLCRALGWLPDEVYIDSPTATPDELTRFHAPEYVAALQAAEAAQAIDDAASERFNIGRGGNPVFGEIFRRPATACGASLLAAEMLAGGEAHIIYSPAGGTHHGQRAAASGFCYLNDPVLAILRLLDRGVARVAYDNIDAHHSDGV 537
P RP F+GSE+YR S YG HPL+IPRVST IDL RA+GWLPD Y+DSP ATPD+L RFH P+YVAA+ AEA Q +D RFN+G+ NPVF E+FRRPATA GAS+LAA+M+ GG I+YSPAGGTHHG+ ASGFCY NDPVL ILRLLDRG+ R+ Y ++DAHH DGV
Sbjct: 14 PPLDRPMFLGSEVYRNSTYGKKHPLSIPRVSTAIDLSRAMGWLPDSSYLDSPIATPDQLARFHEPDYVAAVMRAEAEQRVDADTMARFNLGKLENPVFPEMFRRPATASGASILAADMVLGGG--IVYSPAGGTHHGRPGRASGFCYFNDPVLGILRLLDRGLDRIYYVDLDAHHGDGV 190
BLAST of mRNA_P-wetherbeei_contig14412.2.1 vs. uniprot
Match: A0A1Y6CNZ0_9HYPH (Acetoin utilization protein AcuC n=1 Tax=Tistlia consotensis USBA 355 TaxID=560819 RepID=A0A1Y6CNZ0_9HYPH) HSP 1 Score: 238 bits (607), Expect = 1.180e-74 Identity = 125/184 (67.93%), Postives = 139/184 (75.54%), Query Frame = 1
Query: 1 PMPHRPRFIGSEIYRRSRYGSNHPLAIPRVSTCIDLCRALGWLPDEVYIDSPTATPDELTRFHAPEYVAALQAAEAAQAIDDAASERFNIGRGGNPVFGEIFRRPATACGASLLAAEMLAG-----GEAHIIYSPAGGTHHGQRAAASGFCYLNDPVLAILRLLDRGVARVAYDNIDAHHSDGV 537
P RP IGSEIYRRS YGS HPLAIPRVST +DLCRALGW+ + Y+DSP ATP EL RFHAP YVAA+QAAEA QA+ + A RFNIG GNPVF EIFRRPATACGAS+ A +LA G A IYSPAGGTHHG+ ASGFCY NDPVLAIL LLD G+ R+ Y ++DAHH DGV
Sbjct: 13 PALDRPLLIGSEIYRRSTYGSRHPLAIPRVSTALDLCRALGWVAEGRYLDSPRATPAELARFHAPAYVAAVQAAEAGQAVSEEAKARFNIGVNGNPVFPEIFRRPATACGASIQAGRLLAALPPDHGPA-TIYSPAGGTHHGRPDRASGFCYFNDPVLAILALLDGGLERIFYLDLDAHHGDGV 195
BLAST of mRNA_P-wetherbeei_contig14412.2.1 vs. uniprot
Match: UPI000425A1DB (acetoin utilization protein AcuC n=1 Tax=Azospirillum halopraeferens TaxID=34010 RepID=UPI000425A1DB) HSP 1 Score: 236 bits (603), Expect = 3.460e-74 Identity = 122/179 (68.16%), Postives = 137/179 (76.54%), Query Frame = 1
Query: 4 MPHRPRFIGSEIYRRSRYGSNHPLAIPRVSTCIDLCRALGWLPDEVYIDSPTATPDELTRFHAPEYVAALQAAEAAQAIDDAASERFNIGRGGNPVFGEIFRRPATACGASLLAAEMLAGGEAHIIYSPAGGTHHGQRAAASGFCYLNDPVLAILRLLDRGVARVAYDNIDAHHSDGVD 540
M RP F+GSEIYRRS YG+ HPLAIPRVST IDLCRA+GWLPD Y DSP ATP +L RFH P Y+ ALQ AEA +D A +ER IGR GNP+F EIFRRPAT GASLLAA +L G A +YSPAGGTHHG+R ASGFCYLNDPVL IL LLD G+ RV Y ++DAHH DGV+
Sbjct: 1 MSARPLFLGSEIYRRSSYGAKHPLAIPRVSTTIDLCRAMGWLPDAQYRDSPMATPAQLARFHDPAYIDALQRAEADGQVDAATAERHAIGRFGNPLFPEIFRRPATGAGASLLAARLLLDG-ADTVYSPAGGTHHGRRDRASGFCYLNDPVLGILALLDGGLERVLYVDLDAHHGDGVE 178
BLAST of mRNA_P-wetherbeei_contig14412.2.1 vs. uniprot
Match: A0A2S2CR90_9PROT (Acetoin utilization protein AcuC n=1 Tax=Azospirillum thermophilum TaxID=2202148 RepID=A0A2S2CR90_9PROT) HSP 1 Score: 234 bits (598), Expect = 1.360e-73 Identity = 116/175 (66.29%), Postives = 138/175 (78.86%), Query Frame = 1
Query: 13 RPRFIGSEIYRRSRYGSNHPLAIPRVSTCIDLCRALGWLPDEVYIDSPTATPDELTRFHAPEYVAALQAAEAAQAIDDAASERFNIGRGGNPVFGEIFRRPATACGASLLAAEMLAGGEAHIIYSPAGGTHHGQRAAASGFCYLNDPVLAILRLLDRGVARVAYDNIDAHHSDGV 537
RP FIGSEIYR S YG+ HPL+IPRVST IDL RA+GWL + VY+D+P ATP EL RFHAP+YV AL+ AEAAQ +D A ER+N+GR NPVF E++RRPAT G++LLAA +L G+A +YSPAGGTHHG+ A ASGFCY+N PVL IL LLD GV RV Y ++DAHH DGV
Sbjct: 9 RPVFIGSEIYRGSSYGTKHPLSIPRVSTAIDLSRAMGWLEEAVYLDTPMATPRELARFHAPDYVEALRRAEAAQHVDAATGERYNLGRLENPVFPEMYRRPATGAGSALLAARLLLRGQADTVYSPAGGTHHGRPARASGFCYVNAPVLGILELLDHGVERVLYVDLDAHHGDGV 183
BLAST of mRNA_P-wetherbeei_contig14412.2.1 vs. uniprot
Match: UPI0003B43451 (acetoin utilization protein AcuC n=1 Tax=Fodinicurvata sediminis TaxID=1121832 RepID=UPI0003B43451) HSP 1 Score: 234 bits (598), Expect = 1.520e-73 Identity = 116/174 (66.67%), Postives = 133/174 (76.44%), Query Frame = 1
Query: 16 PRFIGSEIYRRSRYGSNHPLAIPRVSTCIDLCRALGWLPDEVYIDSPTATPDELTRFHAPEYVAALQAAEAAQAIDDAASERFNIGRGGNPVFGEIFRRPATACGASLLAAEMLAGGEAHIIYSPAGGTHHGQRAAASGFCYLNDPVLAILRLLDRGVARVAYDNIDAHHSDGV 537
PRFIGSEIYR S YG HPLAIPRVSTC+DLCRALGWLPDEVY+DSP ATP +L RFH P+Y+AA++ AE Q D +R+ +G GNPVF EIF RPATACGAS+ AA+ + ++SPAGGTHHG+R ASGFCY NDPVL IL LLDRG A V Y +IDAHH DGV
Sbjct: 8 PRFIGSEIYRNSSYGRLHPLAIPRVSTCMDLCRALGWLPDEVYVDSPRATPAQLARFHQPDYIAAVKQAEQTQHCSDEVKQRYALGMNGNPVFPEIFSRPATACGASIAAADWVLNDIP--VHSPAGGTHHGRRGHASGFCYFNDPVLGILSLLDRGAASVFYLDIDAHHGDGV 179
BLAST of mRNA_P-wetherbeei_contig14412.2.1 vs. uniprot
Match: UPI001872942C (acetoin utilization protein AcuC n=1 Tax=Pelagibius sp. NBU2595 TaxID=2762760 RepID=UPI001872942C) HSP 1 Score: 233 bits (595), Expect = 5.710e-73 Identity = 120/180 (66.67%), Postives = 134/180 (74.44%), Query Frame = 1
Query: 13 RPRFIGSEIYRRSRYGSNHPLAIPRVSTCIDLCRALGWLPDE-----VYIDSPTATPDELTRFHAPEYVAALQAAEAAQAIDDAASERFNIGRGGNPVFGEIFRRPATACGASLLAAEMLAGGEAHIIYSPAGGTHHGQRAAASGFCYLNDPVLAILRLLDRGVARVAYDNIDAHHSDGV 537
RPRFIGSEIYRRS YG HPLAIPRVSTCIDLCRALGWLP E VYIDSP A+ EL RFH P Y+ A+Q AEA Q + RFN+GR GNP++ E+FRRPATACGAS+LA LA G A +YSPA GTHHG+ ASGFCY NDP LAIL LLD G+ RV Y ++DAHH DGV
Sbjct: 10 RPRFIGSEIYRRSTYGGRHPLAIPRVSTCIDLCRALGWLPSESDPCGVYIDSPRASAAELARFHDPAYIEAVQRAEADQDLPAEQQVRFNLGRNGNPIYPEVFRRPATACGASILAGRTLAAGAA-ALYSPASGTHHGRPDRASGFCYFNDPALAILALLDGGLERVFYLDVDAHHGDGV 188 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14412.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14412.2.1 >prot_P-wetherbeei_contig14412.2.1 ID=prot_P-wetherbeei_contig14412.2.1|Name=mRNA_P-wetherbeei_contig14412.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=179bp MPHRPRFIGSEIYRRSRYGSNHPLAIPRVSTCIDLCRALGWLPDEVYIDSback to top mRNA from alignment at P-wetherbeei_contig14412:1179..1718+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14412.2.1 ID=mRNA_P-wetherbeei_contig14412.2.1|Name=mRNA_P-wetherbeei_contig14412.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=540bp|location=Sequence derived from alignment at P-wetherbeei_contig14412:1179..1718+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14412:1179..1718+ >mRNA_P-wetherbeei_contig14412.2.1 ID=mRNA_P-wetherbeei_contig14412.2.1|Name=mRNA_P-wetherbeei_contig14412.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=537bp|location=Sequence derived from alignment at P-wetherbeei_contig14412:1179..1718+ (Phaeothamnion wetherbeei SAG_119_79)back to top |