mRNA_P-wetherbeei_contig144.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig144.1.2
Unique NamemRNA_P-wetherbeei_contig144.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig144.1.2 vs. uniprot
Match: D7FKG7_ECTSI (Inorganic diphosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKG7_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 1.620e-30
Identity = 48/59 (81.36%), Postives = 52/59 (88.14%), Query Frame = 1 
Query:    1 SGIREWFRWYKTPDDKPINEFGFGERALTKAETLKVIEECNGHWKALKSGKTEPGKMWI 177
            SGIREWFRWYKTPDDKP+N FGF E+AL K ET+KVI+ECNGHWKAL  GKTE GKMWI
Sbjct:  229 SGIREWFRWYKTPDDKPLNAFGFDEKALNKEETMKVIDECNGHWKALVDGKTEAGKMWI 287
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BLAST of mRNA_P-wetherbeei_contig144.1.2 vs. uniprot
Match: A0A6H5KSZ1_9PHAE (Inorganic diphosphatase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ1_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 9.520e-30
Identity = 48/59 (81.36%), Postives = 52/59 (88.14%), Query Frame = 1 
Query:    1 SGIREWFRWYKTPDDKPINEFGFGERALTKAETLKVIEECNGHWKALKSGKTEPGKMWI 177
            SGIREWFRWYKTPDDKP+N FGF E+AL K ET+KVI+ECNGHWKAL  GKTE GKMWI
Sbjct:  331 SGIREWFRWYKTPDDKPLNAFGFDEKALNKEETMKVIDECNGHWKALVDGKTEAGKMWI 389
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BLAST of mRNA_P-wetherbeei_contig144.1.2 vs. uniprot
Match: A0A836CKW0_9STRA (Inorganic diphosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKW0_9STRA)

HSP 1 Score: 113 bits (282), Expect = 3.200e-29
Identity = 46/59 (77.97%), Postives = 50/59 (84.75%), Query Frame = 1 
Query:    1 SGIREWFRWYKTPDDKPINEFGFGERALTKAETLKVIEECNGHWKALKSGKTEPGKMWI 177
            SGIREWFRWYKTPDDKP+NEFGFGERAL   ET  +I ECNGHWKAL +GKTE GK+W 
Sbjct:  224 SGIREWFRWYKTPDDKPVNEFGFGERALDAKETADIISECNGHWKALVAGKTEKGKLWT 282
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BLAST of mRNA_P-wetherbeei_contig144.1.2 vs. uniprot
Match: A0A8J9S6N0_PHATR (Hypothetical protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9S6N0_PHATR)

HSP 1 Score: 107 bits (267), Expect = 6.670e-28
Identity = 45/61 (73.77%), Postives = 52/61 (85.25%), Query Frame = 1 
Query:    1 SGIREWFRWYKTPDDKPINEFGFGERALTKAETLKVIEECNGHWKALKSGKTEPGKMWIGK 183
            +GIREWFRWYKTPDDKPINEFGF E+ L KAE +KVIEE N  WK LK+G+TE GK+WIG+
Sbjct:  130 AGIREWFRWYKTPDDKPINEFGFDEKYLDKAEAIKVIEETNDAWKKLKAGETEAGKLWIGE 190
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BLAST of mRNA_P-wetherbeei_contig144.1.2 vs. uniprot
Match: W7TQS0_9STRA (Inorganic diphosphatase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQS0_9STRA)

HSP 1 Score: 103 bits (258), Expect = 1.230e-25
Identity = 42/58 (72.41%), Postives = 51/58 (87.93%), Query Frame = 1 
Query:    1 SGIREWFRWYKTPDDKPINEFGFGERALTKAETLKVIEECNGHWKALKSGKTEPGKMW 174
            SGIREWFRWYKTPD KP+NEFGFGE+AL KA+ LKVI+E +G WK+L SG+T+ GK+W
Sbjct:  226 SGIREWFRWYKTPDGKPVNEFGFGEKALAKADALKVIDETHGAWKSLMSGQTDAGKLW 283
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BLAST of mRNA_P-wetherbeei_contig144.1.2 vs. uniprot
Match: A0A7S1UHB8_9STRA (Inorganic diphosphatase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHB8_9STRA)

HSP 1 Score: 103 bits (256), Expect = 1.630e-25
Identity = 42/59 (71.19%), Postives = 48/59 (81.36%), Query Frame = 1 
Query:    1 SGIREWFRWYKTPDDKPINEFGFGERALTKAETLKVIEECNGHWKALKSGKTEPGKMWI 177
            SGIREWFRWYKTPDDKP+N FGF E+ L KA+ +KVIEE N  WKALK GK E GK+W+
Sbjct:  206 SGIREWFRWYKTPDDKPLNGFGFDEKCLPKADAIKVIEETNEQWKALKEGKVEAGKLWL 264
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BLAST of mRNA_P-wetherbeei_contig144.1.2 vs. uniprot
Match: A0A7S1UHT4_9STRA (Inorganic diphosphatase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHT4_9STRA)

HSP 1 Score: 103 bits (256), Expect = 3.680e-25
Identity = 42/59 (71.19%), Postives = 48/59 (81.36%), Query Frame = 1 
Query:    1 SGIREWFRWYKTPDDKPINEFGFGERALTKAETLKVIEECNGHWKALKSGKTEPGKMWI 177
            SGIREWFRWYKTPDDKP+N FGF E+ L KA+ +KVIEE N  WKALK GK E GK+W+
Sbjct:  251 SGIREWFRWYKTPDDKPLNGFGFDEKCLPKADAIKVIEETNEQWKALKEGKVEAGKLWL 309
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BLAST of mRNA_P-wetherbeei_contig144.1.2 vs. uniprot
Match: A0A7S2YMF8_9STRA (Inorganic diphosphatase n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YMF8_9STRA)

HSP 1 Score: 102 bits (254), Expect = 3.700e-25
Identity = 43/58 (74.14%), Postives = 48/58 (82.76%), Query Frame = 1 
Query:    4 GIREWFRWYKTPDDKPINEFGFGERALTKAETLKVIEECNGHWKALKSGKTEPGKMWI 177
            G+REWFRWYKTPDDKPINEFGF E+ L KAE LKVI+E N  W  LKSG+TE GK+WI
Sbjct:  214 GVREWFRWYKTPDDKPINEFGFDEKYLDKAEALKVIDETNEAWAKLKSGETEAGKLWI 271
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BLAST of mRNA_P-wetherbeei_contig144.1.2 vs. uniprot
Match: H6WB91_VAULI (Inorganic diphosphatase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB91_VAULI)

HSP 1 Score: 102 bits (254), Expect = 4.550e-25
Identity = 42/59 (71.19%), Postives = 47/59 (79.66%), Query Frame = 1 
Query:    1 SGIREWFRWYKTPDDKPINEFGFGERALTKAETLKVIEECNGHWKALKSGKTEPGKMWI 177
            SGIREWFRWYKTPDDKP+NEFGFG RAL   ET  VI ECN HWK+L +G ++ GKMW 
Sbjct:  224 SGIREWFRWYKTPDDKPVNEFGFGGRALNAKETKLVISECNEHWKSLIAGNSDKGKMWT 282
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BLAST of mRNA_P-wetherbeei_contig144.1.2 vs. uniprot
Match: A0A482SH08_9ARCH (Inorganic diphosphatase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SH08_9ARCH)

HSP 1 Score: 94.4 bits (233), Expect = 3.760e-24
Identity = 37/60 (61.67%), Postives = 50/60 (83.33%), Query Frame = 1 
Query:    1 SGIREWFRWYKTPDDKPINEFGFGERALTKAETLKVIEECNGHWKALKSGKTEPGKMWIG 180
            +GIREWFRWYKTP+ KP+N FGF E+AL K++ L+VIEE +  W+ L++GKT+ GK+WIG
Sbjct:   11 AGIREWFRWYKTPEGKPLNVFGFNEKALPKSKALEVIEETHHFWQQLRAGKTDKGKLWIG 70
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig144.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKG7_ECTSI1.620e-3081.36Inorganic diphosphatase n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KSZ1_9PHAE9.520e-3081.36Inorganic diphosphatase n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CKW0_9STRA3.200e-2977.97Inorganic diphosphatase n=1 Tax=Tribonema minus Ta... [more]
A0A8J9S6N0_PHATR6.670e-2873.77Hypothetical protein n=3 Tax=Phaeodactylum tricorn... [more]
W7TQS0_9STRA1.230e-2572.41Inorganic diphosphatase n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S1UHB8_9STRA1.630e-2571.19Inorganic diphosphatase n=1 Tax=Phaeomonas parva T... [more]
A0A7S1UHT4_9STRA3.680e-2571.19Inorganic diphosphatase n=1 Tax=Phaeomonas parva T... [more]
A0A7S2YMF8_9STRA3.700e-2574.14Inorganic diphosphatase n=1 Tax=Amphiprora paludos... [more]
H6WB91_VAULI4.550e-2571.19Inorganic diphosphatase n=1 Tax=Vaucheria litorea ... [more]
A0A482SH08_9ARCH3.760e-2461.67Inorganic diphosphatase n=1 Tax=archaeon TaxID=190... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig144contigP-wetherbeei_contig144:670..1144 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FKG7
PFAMsPyrophosphatase
Model size186
Max annot lvl2759|Eukaryota
KEGG koko:K01507
KEGG Pathwayko00190,map00190
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004427,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006950,GO:0006952,GO:0006970,GO:0008150,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009579,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009651,GO:0009941,GO:0010035,GO:0010038,GO:0010876,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019915,GO:0031967,GO:0031975,GO:0033036,GO:0042221,GO:0042742,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046686,GO:0050896,GO:0051179,GO:0051235,GO:0051704,GO:0051707,GO:0065007,GO:0065008,GO:0098542
Exons2
Evalue2.66e-31
EggNOG OGsCOG0221@1|root,KOG1626@2759|Eukaryota
EC3.6.1.1
Descriptioninorganic diphosphatase activity
Cds size186
COG categoryC
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186020.5173497-CDS-P-wetherbeei_contig144:669..7651683186020.5173497-CDS-P-wetherbeei_contig144:669..765Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig144 670..765 -
1683186020.528975-CDS-P-wetherbeei_contig144:1054..11441683186020.528975-CDS-P-wetherbeei_contig144:1054..1144Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig144 1055..1144 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig144.1.2prot_P-wetherbeei_contig144.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig144 670..1144 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig144.1.2

>prot_P-wetherbeei_contig144.1.2 ID=prot_P-wetherbeei_contig144.1.2|Name=mRNA_P-wetherbeei_contig144.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=62bp
SGIREWFRWYKTPDDKPINEFGFGERALTKAETLKVIEECNGHWKALKSG
KTEPGKMWIGK*
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mRNA from alignment at P-wetherbeei_contig144:670..1144-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig144.1.2 ID=mRNA_P-wetherbeei_contig144.1.2|Name=mRNA_P-wetherbeei_contig144.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=475bp|location=Sequence derived from alignment at P-wetherbeei_contig144:670..1144- (Phaeothamnion wetherbeei SAG_119_79)
TCGGGCATTCGCGAGTGGTTCCGGTGGTACAAGACGCCCGACGACAAGCC
CATCAACGAGTTTGGCTTCGGGGAGCGCGCACTCACCAAGGTGCGTTCGA
AGCTTCTCCCCGCTATGAAGAGGTTATTCAGCTGCCTGCTGTCAGTCTTG
TTGACTAATGCTTTCACCTCATTCACAAACGGACTGCAGCGGGGGTGGGG
TTCGCCACGTCGGCGATTCGTTCCTAGCTTCTGATCTCTTTCGCTTTCGT
TTTTCAGAAGAGCTGCAGGCTCTGCAGGTCATCGCGGCGCTCCTTCGACT
GCATGTGCCTGCCAACTGCGCAGCCGGTCTCCGTTTCCTTCTCATCCGTT
TTCTCTGCCATGTCTGGCGCTGAGCGCAGGCGGAGACGCTGAAGGTGATC
GAGGAGTGCAACGGGCACTGGAAGGCGCTCAAGTCCGGAAAGACCGAGCC
TGGCAAGATGTGGATCGGCAAGTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig144:670..1144-

>mRNA_P-wetherbeei_contig144.1.2 ID=mRNA_P-wetherbeei_contig144.1.2|Name=mRNA_P-wetherbeei_contig144.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=186bp|location=Sequence derived from alignment at P-wetherbeei_contig144:670..1144- (Phaeothamnion wetherbeei SAG_119_79)
TCGGGCATTCGCGAGTGGTTCCGGTGGTACAAGACGCCCGACGACAAGCC
CATCAACGAGTTTGGCTTCGGGGAGCGCGCACTCACCAAGGCGGAGACGC
TGAAGGTGATCGAGGAGTGCAACGGGCACTGGAAGGCGCTCAAGTCCGGA
AAGACCGAGCCTGGCAAGATGTGGATCGGCAAGTAA
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